RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 SUMF2Q8NBJ7 301 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 LRRC61Q9BV99 259 aa12.68□□□□□ -0.38
SNX20-202ENST00000330943 SERPINE3A8MV23 424 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 ZNF205O95201 554 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 OPN1LWP04000 364 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 IGHV4-34P06331 123 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 GLI4P10075 376 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 HOXA5P20719 270 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 GABRR1P24046 479 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 CTHP32929 405 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 NDUFA6P56556 154 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 GABREP78334 506 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 C1QL4Q86Z23 238 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 ASPMQ8IZT6 3477 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 INTS12Q96CB8 462 aaKnown RBP12.67□□□□□ -0.38
SNX20-202ENST00000330943 RARRES2Q99969 163 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 MESP1Q9BRJ9 268 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 PRRC2CQ9Y520 2896 aaKnown RBP12.67□□□□□ -0.38
SNX20-202ENST00000330943 C5orf63A6NC05 138 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 NPIPB13A6NJU9 1138 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 IFITM10A6NMD0 228 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 FOXI3A8MTJ6 420 aaPredicted RBP12.67□□□□□ -0.38
SNX20-202ENST00000330943 NPIPB4C9JG80 1138 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 LY86O95711 162 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 KLK3P07288 261 aaPredicted RBP12.67□□□□□ -0.38
SNX20-202ENST00000330943 PIGPP57054 158 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 FOXF1Q12946 379 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 C14orf28Q4W4Y0 310 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 DOK3Q7L591 496 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 OR1N1Q8NGS0 311 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 MR1Q95460 341 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 TREM2Q9NZC2 230 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 PPP4R1LQ9P1A2 415 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 PIAS3Q9Y6X2 628 aa12.67□□□□□ -0.38
SNX20-202ENST00000330943 ADAM10O14672 748 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 GPR137BO60478 399 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 SLC34A2O95436 690 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 IGFBP4P22692 258 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 S100A2P29034 98 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 ASCL1P50553 236 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 CEBPGP53567 150 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 SUCLG1P53597 346 aaKnown RBP12.66□□□□□ -0.38
SNX20-202ENST00000330943 NHLH2Q02577 135 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 SSC4DQ8WTU2 575 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 THAP3Q8WTV1 239 aaPredicted RBP12.66□□□□□ -0.38
SNX20-202ENST00000330943 DDIT4LQ96D03 193 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 REEP6Q96HR9 211 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 S100A13Q99584 98 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 RCL1Q9Y2P8 373 aaKnown RBP12.66□□□□□ -0.38
SNX20-202ENST00000330943 STRAPQ9Y3F4 350 aaKnown RBP12.66□□□□□ -0.38
SNX20-202ENST00000330943 MYO7BQ6PIF6 2116 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 RHPN2P1A8MT19 583 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 ZNF727A8MUV8 499 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 E9PLN8 166 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 GPR37O15354 613 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 RAMP1O60894 148 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 OR5AC1P0C628 307 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 TMEM225BP0DP42 221 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 DEFA6Q01524 100 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 THEM4Q5T1C6 240 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 TSPO2Q5TGU0 170 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 LYZL2Q7Z4W2 148 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 ZNF383Q8NA42 475 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 MRPL13Q9BYD1 178 aaKnown RBP12.66□□□□□ -0.38
SNX20-202ENST00000330943 B3GAT1Q9P2W7 334 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 PCDH15Q96QU1 1955 aa12.66□□□□□ -0.38
SNX20-202ENST00000330943 LIPT2A6NK58 231 aa12.65□□□□□ -0.38
SNX20-202ENST00000330943 ECI1P42126 302 aa12.65□□□□□ -0.38
SNX20-202ENST00000330943 CDX1P47902 265 aaPredicted RBP12.65□□□□□ -0.38
SNX20-202ENST00000330943 FBXW4P57775 412 aa12.65□□□□□ -0.38
SNX20-202ENST00000330943 FOXL2P58012 376 aa12.65□□□□□ -0.38
SNX20-202ENST00000330943 LANCL3Q6ZV70 420 aa12.65□□□□□ -0.38
SNX20-202ENST00000330943 HPSE2Q8WWQ2 592 aa12.65□□□□□ -0.38
SNX20-202ENST00000330943 ST8SIA1Q92185 356 aa12.65□□□□□ -0.38
SNX20-202ENST00000330943 JSRP1Q96MG2 331 aaPredicted RBP12.65□□□□□ -0.38
SNX20-202ENST00000330943 YPEL4Q96NS1 127 aa12.65□□□□□ -0.38
SNX20-202ENST00000330943 C8orf33Q9H7E9 229 aaPredicted RBP12.65□□□□□ -0.38
SNX20-202ENST00000330943 PLEKHJ1Q9NW61 149 aa12.65□□□□□ -0.38
SNX20-202ENST00000330943 KLHL13Q9P2N7 655 aa12.65□□□□□ -0.38
SNX20-202ENST00000330943 RTTNQ86VV8 2226 aa12.65□□□□□ -0.38
SNX20-202ENST00000330943 ANKUB1A6NFN9 424 aa12.65□□□□□ -0.38
SNX20-202ENST00000330943 OR5H8P0DN80 308 aa12.65□□□□□ -0.38
SNX20-202ENST00000330943 FCGR2AP12318 317 aa12.65□□□□□ -0.38
SNX20-202ENST00000330943 MAS1LP35410 378 aa12.65□□□□□ -0.38
SNX20-202ENST00000330943 GPX4P36969 197 aaPredicted RBP12.65□□□□□ -0.38
SNX20-202ENST00000330943 APOBEC1P41238 236 aaKnown RBP12.65□□□□□ -0.38
SNX20-202ENST00000330943 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.65□□□□□ -0.38
SNX20-202ENST00000330943 CRIP3Q6Q6R5 217 aa12.65□□□□□ -0.38
SNX20-202ENST00000330943 SHISA6Q6ZSJ9 500 aa12.65□□□□□ -0.38
SNX20-202ENST00000330943 NOXO1Q8NFA2 376 aa12.65□□□□□ -0.38
SNX20-202ENST00000330943 OR14K1Q8NGZ2 314 aa12.65□□□□□ -0.38
SNX20-202ENST00000330943 TPSD1Q9BZJ3 242 aa12.65□□□□□ -0.38
SNX20-202ENST00000330943 LIME1Q9H400 295 aa12.65□□□□□ -0.38
SNX20-202ENST00000330943 DOK5Q9P104 306 aa12.65□□□□□ -0.38
SNX20-202ENST00000330943 ZDHHC8Q9ULC8 765 aa12.65□□□□□ -0.38
SNX20-202ENST00000330943 KCNIP3Q9Y2W7 256 aa12.65□□□□□ -0.38
SNX20-202ENST00000330943 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.65□□□□□ -0.39
SNX20-202ENST00000330943 VSTM2BA6NLU5 285 aa12.65□□□□□ -0.39
SNX20-202ENST00000330943 GABRG2P18507 467 aa12.65□□□□□ -0.39
SNX20-202ENST00000330943 ZNF674Q2M3X9 581 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms