RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 HIST2H3AQ71DI3 136 aa13.43□□□□□ -0.26
BRCC3-201ENST00000330045 CNTNAP3Q9BZ76 1288 aa13.43□□□□□ -0.26
BRCC3-201ENST00000330045 RHOFQ9HBH0 211 aa13.43□□□□□ -0.26
BRCC3-201ENST00000330045 PLEK2Q9NYT0 353 aa13.43□□□□□ -0.26
BRCC3-201ENST00000330045 EML6Q6ZMW3 1958 aa13.43□□□□□ -0.26
BRCC3-201ENST00000330045 EIF1BO60739 113 aaKnown RBP13.42□□□□□ -0.26
BRCC3-201ENST00000330045 LRP3O75074 770 aa13.42□□□□□ -0.26
BRCC3-201ENST00000330045 APOC1P02654 83 aa13.42□□□□□ -0.26
BRCC3-201ENST00000330045 CELA2AP08217 269 aa13.42□□□□□ -0.26
BRCC3-201ENST00000330045 CD63P08962 238 aa13.42□□□□□ -0.26
BRCC3-201ENST00000330045 RSPO4Q2I0M5 234 aaPredicted RBP13.42□□□□□ -0.26
BRCC3-201ENST00000330045 SULF2Q8IWU5 870 aa13.42□□□□□ -0.26
BRCC3-201ENST00000330045 SGPP2Q8IWX5 399 aa13.42□□□□□ -0.26
BRCC3-201ENST00000330045 GNRHR2Q96P88 292 aa13.42□□□□□ -0.26
BRCC3-201ENST00000330045 MLXQ9UH92 298 aa13.42□□□□□ -0.26
BRCC3-201ENST00000330045 RRP8O43159 456 aaKnown RBP13.42□□□□□ -0.26
BRCC3-201ENST00000330045 VAMP5O95183 116 aa13.42□□□□□ -0.26
BRCC3-201ENST00000330045 ZNF708P17019 499 aa13.42□□□□□ -0.26
BRCC3-201ENST00000330045 CAV2P51636 162 aa13.42□□□□□ -0.26
BRCC3-201ENST00000330045 PCOLCEQ15113 449 aa13.42□□□□□ -0.26
BRCC3-201ENST00000330045 RAET1LQ5VY80 246 aa13.42□□□□□ -0.26
BRCC3-201ENST00000330045 CCDC54Q8NEL0 328 aa13.42□□□□□ -0.26
BRCC3-201ENST00000330045 SPTSSAQ969W0 71 aa13.42□□□□□ -0.26
BRCC3-201ENST00000330045 UCN2Q96RP3 112 aa13.42□□□□□ -0.26
BRCC3-201ENST00000330045 HDHD3Q9BSH5 251 aaPredicted RBP13.42□□□□□ -0.26
BRCC3-201ENST00000330045 FAM96BQ9Y3D0 163 aa13.42□□□□□ -0.26
BRCC3-201ENST00000330045 RTTNQ86VV8 2226 aa13.42□□□□□ -0.26
BRCC3-201ENST00000330045 TMEM225BP0DP42 221 aa13.41□□□□□ -0.26
BRCC3-201ENST00000330045 NPBWR1P48145 328 aa13.41□□□□□ -0.26
BRCC3-201ENST00000330045 OR2A2Q6IF42 318 aa13.41□□□□□ -0.26
BRCC3-201ENST00000330045 MYO7BQ6PIF6 2116 aa13.41□□□□□ -0.26
BRCC3-201ENST00000330045 LINC00518Q8N0U6 118 aa13.41□□□□□ -0.26
BRCC3-201ENST00000330045 TMEM123Q8N131 208 aa13.41□□□□□ -0.26
BRCC3-201ENST00000330045 OR9K2Q8NGE7 335 aa13.41□□□□□ -0.26
BRCC3-201ENST00000330045 FNDC9Q8TBE3 224 aa13.41□□□□□ -0.26
BRCC3-201ENST00000330045 Q96M66 194 aa13.41□□□□□ -0.26
BRCC3-201ENST00000330045 NRIP2Q9BQI9 281 aa13.41□□□□□ -0.26
BRCC3-201ENST00000330045 NAA11Q9BSU3 229 aaPredicted RBP13.41□□□□□ -0.26
BRCC3-201ENST00000330045 OCIAD1Q9NX40 245 aa13.41□□□□□ -0.26
BRCC3-201ENST00000330045 M0R296 226 aa13.41□□□□□ -0.26
BRCC3-201ENST00000330045 MED6O75586 246 aa13.41□□□□□ -0.26
BRCC3-201ENST00000330045 CTSDP07339 412 aaPredicted RBP13.41□□□□□ -0.26
BRCC3-201ENST00000330045 MUC1P15941 1255 aaPredicted RBP13.41□□□□□ -0.26
BRCC3-201ENST00000330045 PRKACAP17612 351 aa13.41□□□□□ -0.26
BRCC3-201ENST00000330045 RCC1P18754 421 aaPredicted RBP13.41□□□□□ -0.26
BRCC3-201ENST00000330045 RPL12P30050 165 aaKnown RBP13.41□□□□□ -0.26
BRCC3-201ENST00000330045 LPAR6P43657 344 aa13.41□□□□□ -0.26
BRCC3-201ENST00000330045 MTCP1P56278 107 aa13.41□□□□□ -0.26
BRCC3-201ENST00000330045 SPEM2Q0P670 501 aa13.41□□□□□ -0.26
BRCC3-201ENST00000330045 SNAI3Q3KNW1 292 aa13.41□□□□□ -0.26
BRCC3-201ENST00000330045 RPUSD3Q6P087 351 aaKnown RBP13.41□□□□□ -0.26
BRCC3-201ENST00000330045 SGK3Q96BR1 496 aa13.41□□□□□ -0.26
BRCC3-201ENST00000330045 ZNF775Q96BV0 537 aaPredicted RBP13.41□□□□□ -0.26
BRCC3-201ENST00000330045 ULBP2Q9BZM5 246 aa13.41□□□□□ -0.26
BRCC3-201ENST00000330045 GPR173Q9NS66 373 aa13.41□□□□□ -0.26
BRCC3-201ENST00000330045 ZNF175Q9Y473 711 aa13.41□□□□□ -0.26
BRCC3-201ENST00000330045 K7EPK0 472 aa13.4□□□□□ -0.26
BRCC3-201ENST00000330045 CST4P01036 141 aa13.4□□□□□ -0.26
BRCC3-201ENST00000330045 CYC1P08574 325 aa13.4□□□□□ -0.26
BRCC3-201ENST00000330045 DSCR4P56555 118 aaPredicted RBP13.4□□□□□ -0.26
BRCC3-201ENST00000330045 SMCO1Q147U7 214 aa13.4□□□□□ -0.26
BRCC3-201ENST00000330045 OPN5Q6U736 354 aa13.4□□□□□ -0.26
BRCC3-201ENST00000330045 RAB11FIP2Q7L804 512 aa13.4□□□□□ -0.26
BRCC3-201ENST00000330045 FAM71E2Q8N5Q1 922 aa13.4□□□□□ -0.26
BRCC3-201ENST00000330045 FBXO17Q96EF6 278 aa13.4□□□□□ -0.26
BRCC3-201ENST00000330045 RCC2Q9P258 522 aaKnown RBP13.4□□□□□ -0.26
BRCC3-201ENST00000330045 ANXA10Q9UJ72 324 aa13.4□□□□□ -0.26
BRCC3-201ENST00000330045 EDARQ9UNE0 448 aa13.4□□□□□ -0.26
BRCC3-201ENST00000330045 CRYM-AS1A6NIL9 109 aa13.4□□□□□ -0.26
BRCC3-201ENST00000330045 IFNA21P01568 189 aa13.4□□□□□ -0.26
BRCC3-201ENST00000330045 CCL3P10147 92 aa13.4□□□□□ -0.26
BRCC3-201ENST00000330045 NME2P22392 152 aa13.4□□□□□ -0.26
BRCC3-201ENST00000330045 SULT1A2P50226 295 aa13.4□□□□□ -0.26
BRCC3-201ENST00000330045 CPNE2Q96FN4 548 aaPredicted RBP13.4□□□□□ -0.26
BRCC3-201ENST00000330045 ANGPTL4Q9BY76 406 aa13.4□□□□□ -0.26
BRCC3-201ENST00000330045 METTL9Q9H1A3 318 aa13.4□□□□□ -0.26
BRCC3-201ENST00000330045 DECR2Q9NUI1 292 aa13.4□□□□□ -0.26
BRCC3-201ENST00000330045 TUBD1Q9UJT1 453 aa13.4□□□□□ -0.26
BRCC3-201ENST00000330045 FOXD3Q9UJU5 478 aaPredicted RBP13.4□□□□□ -0.26
BRCC3-201ENST00000330045 PADI1Q9ULC6 663 aa13.4□□□□□ -0.26
BRCC3-201ENST00000330045 LOC102723996A0A087X1L8 192 aa13.39□□□□□ -0.27
BRCC3-201ENST00000330045 ZIC3O60481 467 aa13.39□□□□□ -0.27
BRCC3-201ENST00000330045 DEDDO75618 318 aa13.39□□□□□ -0.27
BRCC3-201ENST00000330045 FARS2O95363 451 aaKnown RBP13.39□□□□□ -0.27
BRCC3-201ENST00000330045 OR5H8P0DN80 308 aa13.39□□□□□ -0.27
BRCC3-201ENST00000330045 LIFP15018 202 aa13.39□□□□□ -0.27
BRCC3-201ENST00000330045 CHAF1BQ13112 559 aa13.39□□□□□ -0.27
BRCC3-201ENST00000330045 PLXDC2Q6UX71 529 aa13.39□□□□□ -0.27
BRCC3-201ENST00000330045 IFI44Q8TCB0 444 aa13.39□□□□□ -0.27
BRCC3-201ENST00000330045 INTS12Q96CB8 462 aaKnown RBP13.39□□□□□ -0.27
BRCC3-201ENST00000330045 ZNF837Q96EG3 531 aaPredicted RBP13.39□□□□□ -0.27
BRCC3-201ENST00000330045 JSRP1Q96MG2 331 aaPredicted RBP13.39□□□□□ -0.27
BRCC3-201ENST00000330045 FAAP24Q9BTP7 215 aa13.39□□□□□ -0.27
BRCC3-201ENST00000330045 KLF2Q9Y5W3 355 aaPredicted RBP13.39□□□□□ -0.27
BRCC3-201ENST00000330045 IGHV1-45A0A0A0MS14 117 aa13.39□□□□□ -0.27
BRCC3-201ENST00000330045 G3V3Y1 287 aa13.39□□□□□ -0.27
BRCC3-201ENST00000330045 RNASEK-C17orf49H0YIS7 233 aa13.39□□□□□ -0.27
BRCC3-201ENST00000330045 FBXO24O75426 580 aa13.39□□□□□ -0.27
BRCC3-201ENST00000330045 ACKR3P25106 362 aa13.39□□□□□ -0.27
BRCC3-201ENST00000330045 FCGR2CP31995 323 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms