RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 WDR54Q9H977 334 aa12.27□□□□□ -0.45
ATP2C1-201ENST00000328560 LHX6Q9UPM6 363 aa12.27□□□□□ -0.45
ATP2C1-201ENST00000328560 F8VVB4 439 aa12.27□□□□□ -0.45
ATP2C1-201ENST00000328560 F8VWA3 439 aa12.27□□□□□ -0.45
ATP2C1-201ENST00000328560 CD63P08962 238 aa12.27□□□□□ -0.45
ATP2C1-201ENST00000328560 OR5H8P0DN80 308 aa12.27□□□□□ -0.45
ATP2C1-201ENST00000328560 ADCYAP1P18509 176 aa12.27□□□□□ -0.45
ATP2C1-201ENST00000328560 PHLDA2Q53GA4 152 aa12.27□□□□□ -0.45
ATP2C1-201ENST00000328560 REEP6Q96HR9 211 aa12.27□□□□□ -0.45
ATP2C1-201ENST00000328560 CMSS1Q9BQ75 279 aaKnown RBP12.27□□□□□ -0.45
ATP2C1-201ENST00000328560 MEMO1Q9Y316 297 aa12.27□□□□□ -0.45
ATP2C1-201ENST00000328560 CCDC187A0A096LP49 1063 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 A0A0G2JMM0 328 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 A0A1W2PPB8 328 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 A0A1W2PRS3 328 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 KIR3DP1A8MWS1 328 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 PDGFBP01127 241 aaPredicted RBP12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 ID4P47928 161 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 SCRN3Q0VDG4 424 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 TAF9BQ9HBM6 251 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 GHRLQ9UBU3 117 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 KNTC1P50748 2209 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 CELSR3Q9NYQ7 3312 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 TRBV6-7A0A0A0MS04 114 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 A0A0U1RQV5 110 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 RAB19A4D1S5 217 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 CXCL13O43927 109 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 P04436 131 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 PET100P0DJ07 73 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 COX6A1P12074 109 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 HTR5AP47898 357 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 AKR1D1P51857 326 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 RBM39Q14498 530 aaKnown RBP12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 SMCO1Q147U7 214 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 LDLRAD3Q86YD5 345 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 TMEM123Q8N131 208 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 ZIC4Q8N9L1 334 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 POC1AQ8NBT0 407 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 STOML3Q8TAV4 291 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 MRPL24Q96A35 216 aaKnown RBP12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 BORCS8Q96FH0 119 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 IER2Q9BTL4 223 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 METTL9Q9H1A3 318 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 PRDM6Q9NQX0 595 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 C1orf123Q9NWV4 160 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 ANAPC10Q9UM13 185 aa12.26□□□□□ -0.45
ATP2C1-201ENST00000328560 VAMP5O95183 116 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 IFNA21P01568 189 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 ABCA11PQ4W5N1 156 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 CDCP2Q5VXM1 449 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 OR4A4PQ8NGN8 299 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 SSC4DQ8WTU2 575 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 TMEM54Q969K7 222 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 PROK2Q9HC23 129 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 MLXQ9UH92 298 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 AK3Q9UIJ7 227 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 PADI1Q9ULC6 663 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 V9GYS6 101 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 ADAMTS9Q9P2N4 1935 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 A0A087WZY1 265 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 H7C2Y5 167 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 K7EPK0 472 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 FGF16O43320 207 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 RPS2P15880 293 aaKnown RBP12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 ZNF32P17041 273 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 PIGYQ3MUY2 71 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 C9orf135Q5VTT2 229 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 UQCC3Q6UW78 93 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 FAM71E2Q8N5Q1 922 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 IMMP1LQ96LU5 166 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 ANGPTL4Q9BY76 406 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 COLQQ9Y215 455 aaPredicted RBP12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 PCDHGA1Q9Y5H4 931 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 FREM2Q5SZK8 3169 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 LOC102725191A0A1B0GVB3 256 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 DIRAS3O95661 229 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 PVALBP20472 110 aaPredicted RBP12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 CCNOP22674 350 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 CTSSP25774 331 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 RPL12P30050 165 aaKnown RBP12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 PIGPP57054 158 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 CARD18P57730 90 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 C10orf128Q5T292 105 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 PIGCQ92535 297 aa12.25□□□□□ -0.45
ATP2C1-201ENST00000328560 FIGNL2A6NMB9 653 aa12.24□□□□□ -0.45
ATP2C1-201ENST00000328560 KLF7O75840 302 aaPredicted RBP12.24□□□□□ -0.45
ATP2C1-201ENST00000328560 NTF4P34130 210 aa12.24□□□□□ -0.45
ATP2C1-201ENST00000328560 HGFACQ04756 655 aa12.24□□□□□ -0.45
ATP2C1-201ENST00000328560 TRA2AQ13595 282 aaKnown RBP eCLIP12.24□□□□□ -0.45
ATP2C1-201ENST00000328560 GGNBP1Q5YKI7 109 aa12.24□□□□□ -0.45
ATP2C1-201ENST00000328560 RPUSD3Q6P087 351 aaKnown RBP12.24□□□□□ -0.45
ATP2C1-201ENST00000328560 AAED1Q7RTV5 226 aa12.24□□□□□ -0.45
ATP2C1-201ENST00000328560 GPR137CQ8N3F9 429 aa12.24□□□□□ -0.45
ATP2C1-201ENST00000328560 SLC5A7Q9GZV3 580 aa12.24□□□□□ -0.45
ATP2C1-201ENST00000328560 LPAR3Q9UBY5 353 aa12.24□□□□□ -0.45
ATP2C1-201ENST00000328560 ANXA10Q9UJ72 324 aa12.24□□□□□ -0.45
ATP2C1-201ENST00000328560 SHANK1Q9Y566 2161 aa12.24□□□□□ -0.45
ATP2C1-201ENST00000328560 PMS2P1A4D2B8 440 aa12.24□□□□□ -0.45
ATP2C1-201ENST00000328560 GEMIN2O14893 280 aaKnown RBP12.24□□□□□ -0.45
ATP2C1-201ENST00000328560 XRCC2O43543 280 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms