RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 HLA-DMAP28067 261 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 SSTR5P35346 364 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 NMUP48645 174 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 CYB561P49447 251 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 PSMD7P51665 324 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 GFERP55789 205 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 CLDN12P56749 244 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 SYNJ2BPP57105 145 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 VSX2P58304 361 aaPredicted RBP1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 UBE2NP61088 152 aaKnown RBP1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 TSPAN5P62079 268 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 RPL23P62829 140 aaKnown RBP1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 CD164Q04900 197 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 INCA1Q0VD86 236 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 TCP10Q12799 353 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 FLOT2Q14254 428 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 SNRNP35Q16560 246 aaKnown RBP1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 CEACAM16Q2WEN9 425 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 DEFB116Q30KQ4 102 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 RBM48Q5RL73 367 aaKnown RBP1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 THEM4Q5T1C6 240 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 MFSD14CQ5VZR4 134 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 PTRHD1Q6GMV3 140 aaKnown RBP1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 NIPAL1Q6NVV3 410 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 CLEC18BQ6UXF7 455 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 FAM151BQ6UXP7 276 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 PLEKHG7Q6ZR37 379 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 RTL4Q6ZR62 310 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 BLIDQ8IZY5 108 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 SLC7A5P1Q8MH63 180 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 LGI3Q8N145 548 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 SPICQ8N5J4 248 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 C2orf73Q8N5S3 287 aaPredicted RBP1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 RNF10Q8N5U6 811 aaKnown RBP1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 TMEM156Q8N614 296 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 OR4K2Q8NGD2 314 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 OR52P1PQ8NH57 321 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 NT5CQ8TCD5 201 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 PIFOQ8TCI5 191 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 RXFP4Q8TDU9 374 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 DOK4Q8TEW6 326 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 IFT81Q8WYA0 676 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 GHSRQ92847 366 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 NTAN1Q96AB6 310 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 ZMYND19Q96E35 227 aaPredicted RBP1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 Q96MT0 163 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 VAT1Q99536 393 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 TEAD3Q99594 435 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 SHCBP1LQ9BZQ2 653 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 SLC19A3Q9BZV2 496 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 NXF2Q9GZY0 626 aaKnown RBP1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 PRORYQ9H606 182 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 SLC38A10Q9HBR0 1119 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 C6orf50Q9HD87 102 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 ASCL3Q9NQ33 180 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 C1orf109Q9NX04 203 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 NKIRAS1Q9NYS0 192 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 TAS2R13Q9NYV9 303 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 NAGKQ9UJ70 344 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 ANXA10Q9UJ72 324 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 RAB23Q9ULC3 237 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 TFR2Q9UP52 801 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 CFL2Q9Y281 166 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 AP3M1Q9Y2T2 418 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 ORC6Q9Y5N6 252 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 DOCK9Q9BZ29 2069 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 MN1Q10571 1320 aaPredicted RBP1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 MAP3K15Q6ZN16 1313 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 RAD50Q92878 1312 aa1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 BRD4O60885 1362 aaPredicted RBP1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 VIRMAQ69YN4 1812 aaKnown RBP1.31□□□□□ -2.2
CBX3P1-201ENST00000325243 TRAV8-6A0A0B4J262 113 aa1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 CCL15-CCL14A0A0B4J2E2 113 aa1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 RBFOX3A6NFN3 312 aa1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 KRBOX1C9JBD0 128 aa1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 C11orf94C9JXX5 98 aa1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 NDUFC2-KCTD14E9PQ53 114 aa1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 INS-IGF2F8WCM5 200 aa1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 TNFRSF11BO00300 401 aa1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 ATP8B1O43520 1251 aa1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 SPAG7O75391 227 aa1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 UPK1BO75841 260 aa1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 MYO1DO94832 1006 aa1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 GLSO94925 669 aaPredicted RBP1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 SEMA3DO95025 777 aa1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 CD74P04233 296 aa1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 HLA-DPB1P04440 258 aa1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 TLX1NBP0CAT3 122 aa1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 PET100P0DJ07 73 aa1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 RNASE2P10153 161 aaKnown RBP1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 TCN2P20062 427 aa1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 OMGP23515 440 aa1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 GRPRP30550 384 aa1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 PCK1P35558 622 aa1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 RAB38P57729 211 aa1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 MTPNP58546 118 aa1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 PITPNAQ00169 270 aa1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 C2orf54Q08AI8 447 aa1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 GINS1Q14691 196 aa1.3□□□□□ -2.2
CBX3P1-201ENST00000325243 TRIP13Q15645 432 aaPredicted RBP1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms