RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 ARV1Q9H2C2 271 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 ZNF576Q9H609 170 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 ZNF701Q9NV72 531 aaPredicted RBP7.6□□□□□ -1.19
CLK1-201ENST00000321356 FBXL17Q9UF56 701 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 ANXA10Q9UJ72 324 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 FOXD3Q9UJU5 478 aaPredicted RBP7.6□□□□□ -1.19
CLK1-201ENST00000321356 HSF4Q9ULV5 492 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 SDK1Q7Z5N4 2213 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 LY6G6EA0A0G2JKS1 128 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 IGHV5-10-1A0A0J9YXX1 117 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 C9JQL5 133 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 EIF1BO60739 113 aaKnown RBP7.6□□□□□ -1.19
CLK1-201ENST00000321356 MTRF1O75570 445 aaKnown RBP7.6□□□□□ -1.19
CLK1-201ENST00000321356 DBHP09172 617 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 CRYGSP22914 178 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 FCGR2CP31995 323 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 F2RL1P55085 397 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 TMEM33P57088 247 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 CTAG1AP78358 180 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 FAM3AP98173 230 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 PDZK1IP1Q13113 114 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 PCOLCEQ15113 449 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 AVPI1Q5T686 147 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 PRAMEF20Q5VT98 475 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 GGNBP1Q5YKI7 109 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 GUSBP11Q6P575 273 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 PLXDC2Q6UX71 529 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 ZIC4Q8N9L1 334 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 RXFP4Q8TDU9 374 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 MRPL24Q96A35 216 aaKnown RBP7.6□□□□□ -1.19
CLK1-201ENST00000321356 SPSB1Q96BD6 273 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 HDHD3Q9BSH5 251 aaPredicted RBP7.6□□□□□ -1.19
CLK1-201ENST00000321356 LIME1Q9H400 295 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 ESRP2Q9H6T0 727 aaKnown RBP7.6□□□□□ -1.19
CLK1-201ENST00000321356 RNF122Q9H9V4 155 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 PLEKHA2Q9HB19 425 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 BIN3Q9NQY0 253 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 COA4Q9NYJ1 87 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 LHX6Q9UPM6 363 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 MRPS17Q9Y2R5 130 aaKnown RBP7.6□□□□□ -1.19
CLK1-201ENST00000321356 U3KQA8 63 aa7.6□□□□□ -1.19
CLK1-201ENST00000321356 ARID1AO14497 2285 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 LOC102723996A0A087X1L8 192 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 COLCA2A8K830 154 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 TERTO14746 1132 aaKnown RBP7.59□□□□□ -1.19
CLK1-201ENST00000321356 FARS2O95363 451 aaKnown RBP7.59□□□□□ -1.19
CLK1-201ENST00000321356 IFNA21P01568 189 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 CRYBA1P05813 215 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 OR5H8P0DN80 308 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 FOLR2P14207 255 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 DTYMKP23919 212 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 GABRR1P24046 479 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 ACKR3P25106 362 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 NFYBP25208 207 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 DVL1P1P54792 670 aaPredicted RBP7.59□□□□□ -1.19
CLK1-201ENST00000321356 UCP2P55851 309 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 CCL7P80098 99 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 SNAI3Q3KNW1 292 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 FAM27BQ5VT28 67 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 DHRS11Q6UWP2 260 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 ASCL4Q6XD76 172 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 FOXRED2Q8IWF2 684 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 LRTM2Q8N967 370 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 OR9K2Q8NGE7 335 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 SPTSSAQ969W0 71 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 SGK3Q96BR1 496 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 INTS12Q96CB8 462 aaKnown RBP7.59□□□□□ -1.19
CLK1-201ENST00000321356 FBXO17Q96EF6 278 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 GALNT14Q96FL9 552 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 CPNE2Q96FN4 548 aaPredicted RBP7.59□□□□□ -1.19
CLK1-201ENST00000321356 ANGPTL4Q9BY76 406 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 EGLN1Q9GZT9 426 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 ELL3Q9HB65 397 aaPredicted RBP7.59□□□□□ -1.19
CLK1-201ENST00000321356 PROK2Q9HC23 129 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 PLEKHJ1Q9NW61 149 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 PADI1Q9ULC6 663 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 STARD10Q9Y365 291 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 CFAP54Q96N23 3096 aa7.59□□□□□ -1.19
CLK1-201ENST00000321356 ZIC3O60481 467 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 OR8U9P0C7N5 309 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 TMEM225BP0DP42 221 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 SPP1P10451 314 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 LIFP15018 202 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 CHATP28329 748 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 CD80P33681 288 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 MRPS34P82930 218 aaKnown RBP7.58□□□□□ -1.2
CLK1-201ENST00000321356 TMEM187Q14656 261 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 SMCO1Q147U7 214 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 Q6ZRG5 221 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 GALNTL5Q7Z4T8 443 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 C20orf196Q8IYI0 205 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 LRRC18Q8N456 261 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 SPEM1Q8N4L4 309 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 OR8U1Q8NH10 309 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 ERGIC1Q969X5 290 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 KIRREL1Q96J84 757 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 UCN2Q96RP3 112 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 SCRT1Q9BWW7 348 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 METTL9Q9H1A3 318 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 WDR54Q9H977 334 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms