RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 CABLES2Q9BTV7 478 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 SRD5A3Q9H8P0 318 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 ZNF286AQ9HBT8 521 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 TMEM74BQ9NUR3 256 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 PLEKHJ1Q9NW61 149 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 CBY1Q9Y3M2 126 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 CCDC187A0A096LP49 1063 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 A0A1B0GV90 55 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 DIRAS3O95661 229 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 CYB5R3P00387 301 aaPredicted RBP4.21□□□□□ -1.74
PTPN13-201ENST00000316707 CEACAM1P13688 526 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 PPP1CCP36873 323 aaKnown RBP4.21□□□□□ -1.74
PTPN13-201ENST00000316707 SPEM2Q0P670 501 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 FZD2Q14332 565 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 ELOBQ15370 118 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 OR8B8Q15620 311 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 ACOT6Q3I5F7 207 aaPredicted RBP4.21□□□□□ -1.74
PTPN13-201ENST00000316707 TMEM183AQ8IXX5 376 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 TMEM18Q96B42 140 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 ZNF775Q96BV0 537 aaPredicted RBP4.21□□□□□ -1.74
PTPN13-201ENST00000316707 PGAM5Q96HS1 289 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 PECRQ9BY49 303 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 VWA8A3KMH1 1905 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 ZNF850A8MQ14 1090 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 PPP5D1E7EU14 171 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 PHOX2AO14813 284 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 DDAH2O95865 285 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 IGKV3-11P04433 115 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 S100GP29377 79 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 IL2RGP31785 369 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 TNFRSF4P43489 277 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 SQSTM1Q13501 440 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 C2orf27AQ580R0 203 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 UEVLDQ8IX04 471 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 OR10A7Q8NGE5 316 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 HPSE2Q8WWQ2 592 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 ASB10Q8WXI3 467 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 TOMM40LQ969M1 308 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 MEGF10Q96KG7 1140 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 GABRG3Q99928 467 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 KLHL13Q9P2N7 655 aa4.21□□□□□ -1.74
PTPN13-201ENST00000316707 CYB5BO43169 146 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 PITX3O75364 302 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 RAD51DO75771 328 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 FABP4P15090 132 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 MYOGP15173 224 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 VDAC1P21796 283 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 ATP6V0CP27449 155 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 PIGPP57054 158 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 PTCRAQ6ISU1 281 aaPredicted RBP4.2□□□□□ -1.74
PTPN13-201ENST00000316707 CMTM1Q8IZ96 169 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 CARFQ8N187 725 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 TSLPQ969D9 159 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 TMEM68Q96MH6 324 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 CRLF2Q9HC73 371 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 M0R143 59 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 PAX1P15863 534 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 TAS2R30P59541 319 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 EWSR1Q01844 656 aaKnown RBP eCLIP4.2□□□□□ -1.74
PTPN13-201ENST00000316707 PMS2P11Q13670 270 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 TMEM187Q14656 261 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 KISS1Q15726 138 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 SLC25A24Q6NUK1 477 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 TMEM182Q6ZP80 229 aaPredicted RBP4.2□□□□□ -1.74
PTPN13-201ENST00000316707 OR6X1Q8NH79 312 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 OR5B12Q96R08 314 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 GPR87Q9BY21 358 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 TGIF2Q9GZN2 237 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 BANF2Q9H503 90 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 ELL3Q9HB65 397 aaPredicted RBP4.2□□□□□ -1.74
PTPN13-201ENST00000316707 PRAMEF26H0Y7S4 382 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 HRKO00198 91 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 KCNAB3O43448 404 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 XRCC2O43543 280 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 EML2O95834 649 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 LSM6P62312 80 aaKnown RBP4.2□□□□□ -1.74
PTPN13-201ENST00000316707 SLC25A26Q70HW3 274 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 BHLHE23Q8NDY6 225 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 PTPMT1Q8WUK0 201 aaPredicted RBP4.2□□□□□ -1.74
PTPN13-201ENST00000316707 DEFB118Q96PH6 123 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 RRAGCQ9HB90 399 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 FOXD3Q9UJU5 478 aaPredicted RBP4.2□□□□□ -1.74
PTPN13-201ENST00000316707 VAMP5O95183 116 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 SFTPCP11686 197 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 SERPINA2P20848 420 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 GABRR1P24046 479 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 RPL23AP62750 156 aaKnown RBP4.2□□□□□ -1.74
PTPN13-201ENST00000316707 HHEXQ03014 270 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 SLC10A1Q14973 349 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 IQCJQ1A5X6 159 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 OGFOD3Q6PK18 319 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 ZNF574Q6ZN55 896 aaPredicted RBP4.2□□□□□ -1.74
PTPN13-201ENST00000316707 PPP1R3BQ86XI6 285 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 Q8WTZ3 238 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 HAS2Q92819 552 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 IL22RA2Q969J5 263 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 R3HDM4Q96D70 268 aa4.2□□□□□ -1.74
PTPN13-201ENST00000316707 FAM71F1Q96KD3 344 aaPredicted RBP4.2□□□□□ -1.74
PTPN13-201ENST00000316707 LYRM2Q9NU23 88 aaPredicted RBP4.2□□□□□ -1.74
PTPN13-201ENST00000316707 UBE2J1Q9Y385 318 aaPredicted RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms