RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 DTX1Q86Y01 620 aa11.79□□□□□ -0.52
SKA3-202ENST00000314759 CD300LFQ8TDQ1 290 aa11.79□□□□□ -0.52
SKA3-202ENST00000314759 MRPL24Q96A35 216 aaKnown RBP11.79□□□□□ -0.52
SKA3-202ENST00000314759 LYZL4Q96KX0 146 aa11.79□□□□□ -0.52
SKA3-202ENST00000314759 ZNF2Q9BSG1 426 aaPredicted RBP11.79□□□□□ -0.52
SKA3-202ENST00000314759 MCTS1Q9ULC4 181 aaKnown RBP11.79□□□□□ -0.52
SKA3-202ENST00000314759 A0A1B0GX78 115 aa11.78□□□□□ -0.52
SKA3-202ENST00000314759 SERPINE3A8MV23 424 aa11.78□□□□□ -0.52
SKA3-202ENST00000314759 UMAD1C9J7I0 102 aa11.78□□□□□ -0.52
SKA3-202ENST00000314759 TRAF3IP2O43734 574 aaPredicted RBP11.78□□□□□ -0.52
SKA3-202ENST00000314759 OPN5Q6U736 354 aa11.78□□□□□ -0.52
SKA3-202ENST00000314759 C6orf201Q7Z4U5 140 aa11.78□□□□□ -0.52
SKA3-202ENST00000314759 SULF2Q8IWU5 870 aa11.78□□□□□ -0.52
SKA3-202ENST00000314759 UBAC2Q8NBM4 344 aa11.78□□□□□ -0.52
SKA3-202ENST00000314759 PLPP5Q8NEB5 264 aa11.78□□□□□ -0.52
SKA3-202ENST00000314759 POC1BQ8TC44 478 aa11.78□□□□□ -0.52
SKA3-202ENST00000314759 RHOVQ96L33 236 aa11.78□□□□□ -0.52
SKA3-202ENST00000314759 ADAMTS9Q9P2N4 1935 aa11.78□□□□□ -0.52
SKA3-202ENST00000314759 BRWD1Q9NSI6 2320 aa11.78□□□□□ -0.52
SKA3-202ENST00000314759 A0A1W2PNR3 127 aa11.78□□□□□ -0.52
SKA3-202ENST00000314759 ALDH3B1P43353 468 aa11.78□□□□□ -0.52
SKA3-202ENST00000314759 HMGN3Q15651 99 aa11.78□□□□□ -0.52
SKA3-202ENST00000314759 UBE2V2Q15819 145 aa11.78□□□□□ -0.52
SKA3-202ENST00000314759 SGPP2Q8IWX5 399 aa11.78□□□□□ -0.52
SKA3-202ENST00000314759 ZNF565Q8N9K5 539 aa11.78□□□□□ -0.52
SKA3-202ENST00000314759 ZNF383Q8NA42 475 aa11.78□□□□□ -0.52
SKA3-202ENST00000314759 MARS2Q96GW9 593 aaKnown RBP11.78□□□□□ -0.52
SKA3-202ENST00000314759 GNRHR2Q96P88 292 aa11.78□□□□□ -0.52
SKA3-202ENST00000314759 HDHD3Q9BSH5 251 aaPredicted RBP11.78□□□□□ -0.52
SKA3-202ENST00000314759 NKX2-4Q9H2Z4 354 aa11.78□□□□□ -0.52
SKA3-202ENST00000314759 NCOA6Q14686 2063 aaPredicted RBP11.78□□□□□ -0.52
SKA3-202ENST00000314759 RALGAPA1Q6GYQ0 2036 aa11.77□□□□□ -0.52
SKA3-202ENST00000314759 ETV2O00321 342 aaPredicted RBP11.77□□□□□ -0.52
SKA3-202ENST00000314759 RAMP1O60894 148 aa11.77□□□□□ -0.52
SKA3-202ENST00000314759 SCGB1D2O95969 90 aa11.77□□□□□ -0.52
SKA3-202ENST00000314759 QDPRP09417 244 aa11.77□□□□□ -0.52
SKA3-202ENST00000314759 OR13C7P0DN81 318 aa11.77□□□□□ -0.52
SKA3-202ENST00000314759 FOSL1P15407 271 aa11.77□□□□□ -0.52
SKA3-202ENST00000314759 C14orf28Q4W4Y0 310 aa11.77□□□□□ -0.52
SKA3-202ENST00000314759 FAM212BQ9NTI7 297 aaPredicted RBP11.77□□□□□ -0.52
SKA3-202ENST00000314759 FBXO7Q9Y3I1 522 aa11.77□□□□□ -0.52
SKA3-202ENST00000314759 CRYM-AS1A6NIL9 109 aa11.77□□□□□ -0.53
SKA3-202ENST00000314759 MASP2O00187 686 aa11.77□□□□□ -0.53
SKA3-202ENST00000314759 GPR37O15354 613 aa11.77□□□□□ -0.53
SKA3-202ENST00000314759 SLC34A2O95436 690 aa11.77□□□□□ -0.53
SKA3-202ENST00000314759 KLK2P20151 261 aa11.77□□□□□ -0.53
SKA3-202ENST00000314759 SMAD4Q13485 552 aaKnown RBP11.77□□□□□ -0.53
SKA3-202ENST00000314759 D2HGDHQ8N465 521 aa11.77□□□□□ -0.53
SKA3-202ENST00000314759 TPSD1Q9BZJ3 242 aa11.77□□□□□ -0.53
SKA3-202ENST00000314759 ARV1Q9H2C2 271 aa11.77□□□□□ -0.53
SKA3-202ENST00000314759 TREM2Q9NZC2 230 aa11.77□□□□□ -0.53
SKA3-202ENST00000314759 KLRF1Q9NZS2 232 aa11.77□□□□□ -0.53
SKA3-202ENST00000314759 MSTNO14793 375 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 IFNA21P01568 189 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 CTSDP07339 412 aaPredicted RBP11.76□□□□□ -0.53
SKA3-202ENST00000314759 DANCRP0C864 163 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 CD38P28907 300 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 ZNF41P51814 821 aaPredicted RBP11.76□□□□□ -0.53
SKA3-202ENST00000314759 PLPPR5Q32ZL2 321 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 SLC16A14Q7RTX9 510 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 MALSU1Q96EH3 234 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 MRGPRX4Q96LA9 322 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 TM2D1Q9BX74 207 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 LIME1Q9H400 295 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 ELL3Q9HB65 397 aaPredicted RBP11.76□□□□□ -0.53
SKA3-202ENST00000314759 SDHAF3Q9NRP4 125 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 MBPP02686 304 aaPredicted RBP11.76□□□□□ -0.53
SKA3-202ENST00000314759 FCGR2AP12318 317 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 HOXA5P20719 270 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 UCP2P55851 309 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 RPS23P62266 143 aaKnown RBP11.76□□□□□ -0.53
SKA3-202ENST00000314759 KIAA0141Q14154 515 aaPredicted RBP11.76□□□□□ -0.53
SKA3-202ENST00000314759 OGFOD3Q6PK18 319 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 NFAM1Q8NET5 270 aaPredicted RBP11.76□□□□□ -0.53
SKA3-202ENST00000314759 OR6X1Q8NH79 312 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 PGAM5Q96HS1 289 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 LMAN1LQ9HAT1 526 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 WFDC1Q9HC57 220 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 PPP4R1LQ9P1A2 415 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 EXPH5Q8NEV8 1989 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 PRUNE2Q8WUY3 3088 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 IGHV1OR21-1A0A087WYE8 117 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 A0A1W2PR77 199 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 SELLP14151 372 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 FAHP16930 419 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 RPS10P46783 165 aaKnown RBP11.76□□□□□ -0.53
SKA3-202ENST00000314759 RAB5CP51148 216 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 NDUFA6P56556 154 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 GRB2P62993 217 aaKnown RBP11.76□□□□□ -0.53
SKA3-202ENST00000314759 DEFA6Q01524 100 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 SHHQ15465 462 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 KCNMB1Q16558 191 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 HIST3H3Q16695 136 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 ZNF784Q8NCA9 323 aaPredicted RBP11.76□□□□□ -0.53
SKA3-202ENST00000314759 STT3BQ8TCJ2 826 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 SH3BGRL3Q9H299 93 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 PLEKHA2Q9HB19 425 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 DECR2Q9NUI1 292 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 PADI1Q9ULC6 663 aa11.76□□□□□ -0.53
SKA3-202ENST00000314759 MMP24Q9Y5R2 645 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms