RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 NPIPB4C9JG80 1138 aa12□□□□□ -0.49
DDX54-202ENST00000314045 ZNF354AO60765 605 aaPredicted RBP12□□□□□ -0.49
DDX54-202ENST00000314045 PDCD6O75340 191 aa12□□□□□ -0.49
DDX54-202ENST00000314045 KLF3P57682 345 aaPredicted RBP12□□□□□ -0.49
DDX54-202ENST00000314045 C1QTNF12Q5T7M4 302 aa12□□□□□ -0.49
DDX54-202ENST00000314045 RFPL4BQ6ZWI9 263 aa12□□□□□ -0.49
DDX54-202ENST00000314045 ZNF441Q8N8Z8 693 aa12□□□□□ -0.49
DDX54-202ENST00000314045 C10orf35Q96D05 121 aa12□□□□□ -0.49
DDX54-202ENST00000314045 AIFM2Q9BRQ8 373 aa12□□□□□ -0.49
DDX54-202ENST00000314045 CACNA1DQ01668 2161 aa12□□□□□ -0.49
DDX54-202ENST00000314045 A0A1B0GUH1 482 aa12□□□□□ -0.49
DDX54-202ENST00000314045 PYCARD-AS1I3L0S3 204 aa12□□□□□ -0.49
DDX54-202ENST00000314045 M0R036 132 aa12□□□□□ -0.49
DDX54-202ENST00000314045 TOR1AO14656 332 aa12□□□□□ -0.49
DDX54-202ENST00000314045 CD1AP06126 327 aa12□□□□□ -0.49
DDX54-202ENST00000314045 YIPF5Q969M3 257 aa12□□□□□ -0.49
DDX54-202ENST00000314045 AMDHD2Q9Y303 409 aa12□□□□□ -0.49
DDX54-202ENST00000314045 LHFPL6Q9Y693 200 aa12□□□□□ -0.49
DDX54-202ENST00000314045 INTS1Q8N201 2190 aaKnown RBP11.99□□□□□ -0.49
DDX54-202ENST00000314045 CELA3AP09093 270 aa11.99□□□□□ -0.49
DDX54-202ENST00000314045 KRTCAP3Q53RY4 240 aa11.99□□□□□ -0.49
DDX54-202ENST00000314045 LRRTM1Q86UE6 522 aa11.99□□□□□ -0.49
DDX54-202ENST00000314045 EIF5A2Q9GZV4 153 aaKnown RBP11.99□□□□□ -0.49
DDX54-202ENST00000314045 ZNF230Q9UIE0 474 aaPredicted RBP11.99□□□□□ -0.49
DDX54-202ENST00000314045 A0A0G2JMM0 328 aa11.99□□□□□ -0.49
DDX54-202ENST00000314045 A0A1W2PPB8 328 aa11.99□□□□□ -0.49
DDX54-202ENST00000314045 A0A1W2PRS3 328 aa11.99□□□□□ -0.49
DDX54-202ENST00000314045 KIR3DP1A8MWS1 328 aa11.99□□□□□ -0.49
DDX54-202ENST00000314045 GMDSO60547 372 aa11.99□□□□□ -0.49
DDX54-202ENST00000314045 ZNF808Q8N4W9 903 aaPredicted RBP11.99□□□□□ -0.49
DDX54-202ENST00000314045 UBALD1Q8TB05 177 aa11.99□□□□□ -0.49
DDX54-202ENST00000314045 TCTEX1D2Q8WW35 142 aa11.99□□□□□ -0.49
DDX54-202ENST00000314045 SLC39A7Q92504 469 aa11.99□□□□□ -0.49
DDX54-202ENST00000314045 ARPC4-TTLL3A0A0A6YYG9 625 aa11.99□□□□□ -0.49
DDX54-202ENST00000314045 ENSAO43768 121 aaKnown RBP11.99□□□□□ -0.49
DDX54-202ENST00000314045 FBXO24O75426 580 aa11.99□□□□□ -0.49
DDX54-202ENST00000314045 F2RL1P55085 397 aa11.99□□□□□ -0.49
DDX54-202ENST00000314045 RAB31Q13636 194 aa11.99□□□□□ -0.49
DDX54-202ENST00000314045 OR2AK2Q8NG84 335 aa11.99□□□□□ -0.49
DDX54-202ENST00000314045 CD300LFQ8TDQ1 290 aa11.99□□□□□ -0.49
DDX54-202ENST00000314045 RTN4IP1Q8WWV3 396 aaPredicted RBP11.99□□□□□ -0.49
DDX54-202ENST00000314045 MRPS24Q96EL2 167 aaKnown RBP11.99□□□□□ -0.49
DDX54-202ENST00000314045 PGLYRP3Q96LB9 341 aa11.99□□□□□ -0.49
DDX54-202ENST00000314045 ZMIZ1Q9ULJ6 1067 aa11.99□□□□□ -0.49
DDX54-202ENST00000314045 MSTNO14793 375 aa11.98□□□□□ -0.49
DDX54-202ENST00000314045 AKR7A2O43488 359 aa11.98□□□□□ -0.49
DDX54-202ENST00000314045 OR4D6Q8NGJ1 314 aa11.98□□□□□ -0.49
DDX54-202ENST00000314045 TIMP4Q99727 224 aa11.98□□□□□ -0.49
DDX54-202ENST00000314045 FN3KRPQ9HA64 309 aa11.98□□□□□ -0.49
DDX54-202ENST00000314045 PRSS50Q9UI38 385 aa11.98□□□□□ -0.49
DDX54-202ENST00000314045 TINAGQ9UJW2 476 aa11.98□□□□□ -0.49
DDX54-202ENST00000314045 LRP5LA4QPB2 252 aa11.98□□□□□ -0.49
DDX54-202ENST00000314045 SNRPGP15A8MWD9 76 aa11.98□□□□□ -0.49
DDX54-202ENST00000314045 CYTIPO60759 359 aa11.98□□□□□ -0.49
DDX54-202ENST00000314045 GPR157Q5UAW9 335 aa11.98□□□□□ -0.49
DDX54-202ENST00000314045 FNDC7Q5VTL7 733 aa11.98□□□□□ -0.49
DDX54-202ENST00000314045 MAP6Q96JE9 813 aa11.98□□□□□ -0.49
DDX54-202ENST00000314045 CHST5Q9GZS9 411 aa11.98□□□□□ -0.49
DDX54-202ENST00000314045 ZNF703Q9H7S9 590 aaPredicted RBP11.98□□□□□ -0.49
DDX54-202ENST00000314045 PPP1R3CQ9UQK1 317 aa11.98□□□□□ -0.49
DDX54-202ENST00000314045 V9GYH0 126 aa11.98□□□□□ -0.49
DDX54-202ENST00000314045 TSPAN15O95858 294 aa11.98□□□□□ -0.49
DDX54-202ENST00000314045 GIPP09681 153 aaPredicted RBP11.98□□□□□ -0.49
DDX54-202ENST00000314045 SNCAP37840 140 aa11.98□□□□□ -0.49
DDX54-202ENST00000314045 TSC22D1Q15714 1073 aa11.98□□□□□ -0.49
DDX54-202ENST00000314045 CD200R1LQ6Q8B3 271 aa11.98□□□□□ -0.49
DDX54-202ENST00000314045 MRPL41Q8IXM3 137 aaKnown RBP11.98□□□□□ -0.49
DDX54-202ENST00000314045 STARD10Q9Y365 291 aa11.98□□□□□ -0.49
DDX54-202ENST00000314045 C17orf107Q6ZR85 190 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 NAA40Q86UY6 237 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 ASF1BQ9NVP2 202 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 A0A0B4J2A0 478 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 SOCS1O15524 211 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 NDUFB6O95139 128 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 C1QBP02746 253 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 SERPINF1P36955 418 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 PIGPP57054 158 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 RPP30P78346 268 aaKnown RBP11.97□□□□□ -0.49
DDX54-202ENST00000314045 PLA2G7Q13093 441 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 HLXQ14774 488 aaPredicted RBP11.97□□□□□ -0.49
DDX54-202ENST00000314045 RSPO4Q2I0M5 234 aaPredicted RBP11.97□□□□□ -0.49
DDX54-202ENST00000314045 FADS6Q8N9I5 356 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 SHPKQ9UHJ6 478 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 SF3B6Q9Y3B4 125 aaKnown RBP11.97□□□□□ -0.49
DDX54-202ENST00000314045 C16orf97H3BN30 126 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 IFNA4P05014 189 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 TMPRSS3P57727 454 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 MICBQ29980 383 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 ALKAL2Q6UX46 152 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 GVQW1Q8N7I0 195 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 OR52B4Q8NGK2 314 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 SLC25A40Q8TBP6 338 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 C22orf15Q8WYQ4 148 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 WNT2BQ93097 391 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 TECTAO75443 2155 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 A0A0U1RQV5 110 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 A0A1W2PPH5 198 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 ZNF705EA8MWA4 302 aaPredicted RBP11.97□□□□□ -0.49
DDX54-202ENST00000314045 APOC3P02656 99 aa11.97□□□□□ -0.49
DDX54-202ENST00000314045 VSIG8P0DPA2 414 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms