RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 PCDHGB1Q9Y5G3 927 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 ISG15P05161 165 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 PSG2P11465 335 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 IL18R1Q13478 541 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 CDK5R1Q15078 307 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 STUMQ69YW2 141 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 KCTD20Q7Z5Y7 419 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 OR5AK2Q8NH90 309 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 GAFA1Q96PS6 74 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 C8orf4Q9NR00 106 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 ZNF581Q9P0T4 197 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 CLN8Q9UBY8 286 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 ATRQ13535 2644 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 RFPL4AA6NLU0 287 aa9.98□□□□□ -0.81
SCFD1-201ENST00000311943 RFPL4AL1F8VTS6 287 aa9.98□□□□□ -0.81
SCFD1-201ENST00000311943 UBCP0CG48 685 aaKnown RBP9.98□□□□□ -0.81
SCFD1-201ENST00000311943 IGHV4-38-2P0DP08 117 aa9.98□□□□□ -0.81
SCFD1-201ENST00000311943 SRD5A1P18405 259 aa9.98□□□□□ -0.81
SCFD1-201ENST00000311943 GABRA2P47869 451 aa9.98□□□□□ -0.81
SCFD1-201ENST00000311943 POU3F4P49335 361 aa9.98□□□□□ -0.81
SCFD1-201ENST00000311943 CCR9P51686 369 aa9.98□□□□□ -0.81
SCFD1-201ENST00000311943 GBX2P52951 348 aaPredicted RBP9.98□□□□□ -0.81
SCFD1-201ENST00000311943 RPS11P62280 158 aaKnown RBP eCLIP9.98□□□□□ -0.81
SCFD1-201ENST00000311943 SLC25A26Q70HW3 274 aa9.98□□□□□ -0.81
SCFD1-201ENST00000311943 C1QL2Q7Z5L3 287 aa9.98□□□□□ -0.81
SCFD1-201ENST00000311943 MUC20Q8N307 709 aaPredicted RBP9.98□□□□□ -0.81
SCFD1-201ENST00000311943 OR8B3Q8NGG8 313 aa9.98□□□□□ -0.81
SCFD1-201ENST00000311943 ANGPTL6Q8NI99 470 aa9.98□□□□□ -0.81
SCFD1-201ENST00000311943 ST8SIA4Q92187 359 aa9.98□□□□□ -0.81
SCFD1-201ENST00000311943 PGLYRP3Q96LB9 341 aa9.98□□□□□ -0.81
SCFD1-201ENST00000311943 OR8B2Q96RD0 313 aa9.98□□□□□ -0.81
SCFD1-201ENST00000311943 JAM3Q9BX67 310 aa9.98□□□□□ -0.81
SCFD1-201ENST00000311943 RBFOX1Q9NWB1 397 aaKnown RBP9.98□□□□□ -0.81
SCFD1-201ENST00000311943 BABAM2Q9NXR7 383 aa9.98□□□□□ -0.81
SCFD1-201ENST00000311943 TAS2R4Q9NYW5 299 aa9.98□□□□□ -0.81
SCFD1-201ENST00000311943 CDC42EP3Q9UKI2 254 aa9.98□□□□□ -0.81
SCFD1-201ENST00000311943 HHLA2Q9UM44 414 aa9.98□□□□□ -0.81
SCFD1-201ENST00000311943 CAB39Q9Y376 341 aaPredicted RBP9.98□□□□□ -0.81
SCFD1-201ENST00000311943 INSIG2Q9Y5U4 225 aa9.98□□□□□ -0.81
SCFD1-201ENST00000311943 TRAV38-1A0A0B4J264 116 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 TRAV20A0A0B4J274 112 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 TMEM210A6NLX4 147 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 OR2AT4A6NND4 320 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 ATP6V1B1P15313 513 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 AZGP1P25311 298 aaKnown RBP9.97□□□□□ -0.81
SCFD1-201ENST00000311943 MAP2K4P45985 399 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 MICBQ29980 383 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 TMEM244Q5VVB8 128 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 BTN2A1Q7KYR7 527 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 STX19Q8N4C7 294 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 GHSRQ92847 366 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 ANKRD60Q9BZ19 345 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 VCXQ9H320 206 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 NLKQ9UBE8 527 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 MIOXQ9UGB7 285 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 OR14J1Q9UGF5 321 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 NOP16Q9Y3C1 178 aaKnown RBP9.97□□□□□ -0.81
SCFD1-201ENST00000311943 HSPE1-MOB4S4R3N1 261 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 A0A0G2JMP0 313 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 A0A0X1KG70 313 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 MDFIC2A0A1B0GVS7 189 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 OR5B21A6NL26 309 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 FOXH1O75593 365 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 FAM157CP0CG43 387 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 ZNF12P17014 697 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 ATF1P18846 271 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 MYL12AP19105 171 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 MYF6P23409 242 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 CFHR2P36980 270 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 SRP14P37108 136 aaKnown RBP9.97□□□□□ -0.81
SCFD1-201ENST00000311943 FAM27D1Q5T7N8 215 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 ACP7Q6ZNF0 438 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 OR4M2Q8NGB6 313 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 RPS4Y2Q8TD47 263 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 TSEN15Q8WW01 171 aaKnown RBP9.97□□□□□ -0.81
SCFD1-201ENST00000311943 DUX5Q96PT3 197 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 INPP5EQ9NRR6 644 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 PLCXD1Q9NUJ7 323 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 ZNF222Q9UK12 451 aa9.97□□□□□ -0.81
SCFD1-201ENST00000311943 IGHV2-70DA0A0C4DH43 119 aa9.96□□□□□ -0.81
SCFD1-201ENST00000311943 A8MXK9 166 aa9.96□□□□□ -0.81
SCFD1-201ENST00000311943 OGG1O15527 345 aa9.96□□□□□ -0.81
SCFD1-201ENST00000311943 MT-ND2P03891 347 aa9.96□□□□□ -0.81
SCFD1-201ENST00000311943 CDK1P06493 297 aa9.96□□□□□ -0.81
SCFD1-201ENST00000311943 PGA5P0DJD9 388 aa9.96□□□□□ -0.81
SCFD1-201ENST00000311943 ZNF20P17024 532 aa9.96□□□□□ -0.81
SCFD1-201ENST00000311943 BCL3P20749 454 aa9.96□□□□□ -0.81
SCFD1-201ENST00000311943 MTCP1P56278 107 aa9.96□□□□□ -0.81
SCFD1-201ENST00000311943 ERVK11-1P61568 191 aa9.96□□□□□ -0.81
SCFD1-201ENST00000311943 ARF6P62330 175 aa9.96□□□□□ -0.81
SCFD1-201ENST00000311943 RIPK1Q13546 671 aa9.96□□□□□ -0.81
SCFD1-201ENST00000311943 ZBTB37Q5TC79 503 aa9.96□□□□□ -0.81
SCFD1-201ENST00000311943 RUSC1-AS1Q66K80 236 aa9.96□□□□□ -0.81
SCFD1-201ENST00000311943 DMKNQ6E0U4 476 aaPredicted RBP9.96□□□□□ -0.81
SCFD1-201ENST00000311943 BRD3OSQ6XYD6 125 aa9.96□□□□□ -0.81
SCFD1-201ENST00000311943 ZNF788Q6ZQV5 615 aa9.96□□□□□ -0.81
SCFD1-201ENST00000311943 NANOGP1Q8N7R0 232 aa9.96□□□□□ -0.81
SCFD1-201ENST00000311943 POC1AQ8NBT0 407 aa9.96□□□□□ -0.81
SCFD1-201ENST00000311943 OR52N4Q8NGI2 321 aa9.96□□□□□ -0.81
SCFD1-201ENST00000311943 RAB40AQ8WXH6 277 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms