RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 FMODQ06828 376 aa7.12□□□□□ -1.27
CHD6-201ENST00000309279 CD47Q08722 323 aa7.12□□□□□ -1.27
CHD6-201ENST00000309279 GINS1Q14691 196 aa7.12□□□□□ -1.27
CHD6-201ENST00000309279 DAZAP2Q15038 168 aaPredicted RBP7.12□□□□□ -1.27
CHD6-201ENST00000309279 PTGES3Q15185 160 aaKnown RBP7.12□□□□□ -1.27
CHD6-201ENST00000309279 TAB1Q15750 504 aa7.12□□□□□ -1.27
CHD6-201ENST00000309279 COX19Q49B96 90 aa7.12□□□□□ -1.27
CHD6-201ENST00000309279 C9orf135Q5VTT2 229 aa7.12□□□□□ -1.27
CHD6-201ENST00000309279 ACSM5Q6NUN0 579 aa7.12□□□□□ -1.27
CHD6-201ENST00000309279 TEX38Q6PEX7 206 aa7.12□□□□□ -1.27
CHD6-201ENST00000309279 FOXL2NBQ6ZUU3 175 aa7.12□□□□□ -1.27
CHD6-201ENST00000309279 MRPL21Q7Z2W9 205 aaKnown RBP7.12□□□□□ -1.27
CHD6-201ENST00000309279 TMEM17Q86X19 198 aa7.12□□□□□ -1.27
CHD6-201ENST00000309279 CBR4Q8N4T8 237 aa7.12□□□□□ -1.27
CHD6-201ENST00000309279 WDR31Q8NA23 367 aa7.12□□□□□ -1.27
CHD6-201ENST00000309279 OR52E2Q8NGJ4 325 aa7.12□□□□□ -1.27
CHD6-201ENST00000309279 OR4K13Q8NH42 304 aa7.12□□□□□ -1.27
CHD6-201ENST00000309279 EME1Q96AY2 570 aa7.12□□□□□ -1.27
CHD6-201ENST00000309279 NMNAT3Q96T66 252 aa7.12□□□□□ -1.27
CHD6-201ENST00000309279 FOXB1Q99853 325 aa7.12□□□□□ -1.27
CHD6-201ENST00000309279 MED18Q9BUE0 208 aa7.12□□□□□ -1.27
CHD6-201ENST00000309279 GABARAPL3Q9BY60 117 aa7.12□□□□□ -1.27
CHD6-201ENST00000309279 SYT4Q9H2B2 425 aa7.12□□□□□ -1.27
CHD6-201ENST00000309279 SLC25A19Q9HC21 320 aa7.12□□□□□ -1.27
CHD6-201ENST00000309279 SLC17A5Q9NRA2 495 aa7.12□□□□□ -1.27
CHD6-201ENST00000309279 CMC2Q9NRP2 79 aa7.12□□□□□ -1.27
CHD6-201ENST00000309279 TMEM38BQ9NVV0 291 aa7.12□□□□□ -1.27
CHD6-201ENST00000309279 UGT2A1Q9Y4X1 527 aa7.12□□□□□ -1.27
CHD6-201ENST00000309279 TSSC4Q9Y5U2 329 aaPredicted RBP7.12□□□□□ -1.27
CHD6-201ENST00000309279 LRBAP50851 2863 aa7.12□□□□□ -1.27
CHD6-201ENST00000309279 RTTNQ86VV8 2226 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 ELOA3CA0A087WX78 387 aaPredicted RBP7.11□□□□□ -1.27
CHD6-201ENST00000309279 OR6C68A6NDL8 312 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 METTL15A6NJ78 407 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 E9PQ18 207 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 H7C1C5 153 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 CCRL2O00421 344 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 ARPC5O15511 151 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 SLC2A10O95528 541 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 IFNA2P01563 188 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 PPBPP02775 128 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 AMY1AP04745 511 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 CTLA4P16410 223 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 NPR2P20594 1047 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 EPHA2P29317 976 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 RAB13P51153 203 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 ZNF84P51523 738 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 FGF8P55075 233 aaPredicted RBP7.11□□□□□ -1.27
CHD6-201ENST00000309279 LSM6P62312 80 aaKnown RBP7.11□□□□□ -1.27
CHD6-201ENST00000309279 LCN6P62502 163 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 MRPS34P82930 218 aaKnown RBP7.11□□□□□ -1.27
CHD6-201ENST00000309279 GAGE1Q13065 139 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 EFNB3Q15768 340 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 SMN1Q16637 294 aaKnown RBP7.11□□□□□ -1.27
CHD6-201ENST00000309279 MICBQ29980 383 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 PGGHGQ32M88 737 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 PAN3Q58A45 887 aaKnown RBP7.11□□□□□ -1.27
CHD6-201ENST00000309279 ELP2Q6IA86 826 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 LEG1Q6P5S2 330 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 PUSL1Q8N0Z8 303 aaKnown RBP7.11□□□□□ -1.27
CHD6-201ENST00000309279 OR6V1Q8N148 313 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 SLC22A24Q8N4F4 322 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 IQCF1Q8N6M8 205 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 CCDC54Q8NEL0 328 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 OR5T2Q8NGG2 359 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 WIPF2Q8TF74 440 aaPredicted RBP7.11□□□□□ -1.27
CHD6-201ENST00000309279 MUCL1Q96DR8 90 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 C2orf88Q9BSF0 95 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 SIAEQ9HAT2 523 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 PLGRKTQ9HBL7 147 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 ZNF226Q9NYT6 803 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 KLHL21Q9UJP4 597 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 SLC25A15Q9Y619 301 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 ITPR2Q14571 2701 aa7.11□□□□□ -1.27
CHD6-201ENST00000309279 ROS1P08922 2347 aa7.1□□□□□ -1.27
CHD6-201ENST00000309279 APCP25054 2843 aa7.1□□□□□ -1.27
CHD6-201ENST00000309279 FBN2P35556 2912 aa7.1□□□□□ -1.27
CHD6-201ENST00000309279 TMEM89A2RUT3 159 aa7.1□□□□□ -1.27
CHD6-201ENST00000309279 ZAR1LA6NP61 321 aa7.1□□□□□ -1.27
CHD6-201ENST00000309279 DCTN6O00399 190 aa7.1□□□□□ -1.27
CHD6-201ENST00000309279 RS1O15537 224 aa7.1□□□□□ -1.27
CHD6-201ENST00000309279 SLC16A7O60669 478 aa7.1□□□□□ -1.27
CHD6-201ENST00000309279 FADS2O95864 444 aaKnown RBP7.1□□□□□ -1.27
CHD6-201ENST00000309279 RENP00797 406 aa7.1□□□□□ -1.27
CHD6-201ENST00000309279 RAF1P04049 648 aa7.1□□□□□ -1.27
CHD6-201ENST00000309279 COX6B1P14854 86 aa7.1□□□□□ -1.27
CHD6-201ENST00000309279 CRYGSP22914 178 aa7.1□□□□□ -1.27
CHD6-201ENST00000309279 POLR2IP36954 125 aaKnown RBP7.1□□□□□ -1.27
CHD6-201ENST00000309279 TNK1Q13470 666 aa7.1□□□□□ -1.27
CHD6-201ENST00000309279 FAM27BQ5VT28 67 aa7.1□□□□□ -1.27
CHD6-201ENST00000309279 SLX4IPQ5VYV7 408 aa7.1□□□□□ -1.27
CHD6-201ENST00000309279 SDR9C7Q8NEX9 313 aa7.1□□□□□ -1.27
CHD6-201ENST00000309279 NUDCD2Q8WVJ2 157 aa7.1□□□□□ -1.27
CHD6-201ENST00000309279 LHX4Q969G2 390 aa7.1□□□□□ -1.27
CHD6-201ENST00000309279 PIGTQ969N2 578 aa7.1□□□□□ -1.27
CHD6-201ENST00000309279 ERGIC1Q969X5 290 aa7.1□□□□□ -1.27
CHD6-201ENST00000309279 NABP1Q96AH0 204 aa7.1□□□□□ -1.27
CHD6-201ENST00000309279 TSSK2Q96PF2 358 aa7.1□□□□□ -1.27
CHD6-201ENST00000309279 OR51M1Q9H341 326 aa7.1□□□□□ -1.27
CHD6-201ENST00000309279 B3GNT2Q9NY97 397 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms