RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 TIMP3P35625 211 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 PER3P56645 1201 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 P2RY6Q15077 328 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 ATAD3CQ5T2N8 411 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 TRAPPC6BQ86SZ2 158 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 CD163Q86VB7 1156 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 FTMTQ8N4E7 242 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 OR51T1Q8NGJ9 327 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 OR10K1Q8NGX5 313 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 NUDCD2Q8WVJ2 157 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 Q96M66 194 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 PAPOLGQ9BWT3 736 aaKnown RBP10.22□□□□□ -0.77
TRIM40-205ENST00000307859 METTL9Q9H1A3 318 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 ZNF71Q9NQZ8 489 aaPredicted RBP10.22□□□□□ -0.77
TRIM40-205ENST00000307859 GPR160Q9UJ42 338 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 ZNF221Q9UK13 617 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 SPTBN1Q01082 2364 aaKnown RBP10.22□□□□□ -0.77
TRIM40-205ENST00000307859 A0A1B0GUH1 482 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 PQLC2LA1A4F0 135 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 CD300LBA8K4G0 201 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 SPRY1O43609 319 aaPredicted RBP10.22□□□□□ -0.77
TRIM40-205ENST00000307859 ANGPTL7O43827 346 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 PRAF2O60831 178 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 SMPD2O60906 423 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 ZNF780AO75290 641 aaPredicted RBP10.22□□□□□ -0.77
TRIM40-205ENST00000307859 RAB3DO95716 219 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 IGKV3-15P01624 115 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 IDH3GP51553 393 aaPredicted RBP10.22□□□□□ -0.77
TRIM40-205ENST00000307859 PDZK1IP1Q13113 114 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 PRDX4Q13162 271 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 MRPL49Q13405 166 aaKnown RBP10.22□□□□□ -0.77
TRIM40-205ENST00000307859 RBMS2Q15434 407 aaKnown RBP10.22□□□□□ -0.77
TRIM40-205ENST00000307859 TSC22D1Q15714 1073 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 ZNF782Q6ZMW2 699 aaPredicted RBP10.22□□□□□ -0.77
TRIM40-205ENST00000307859 CXorf67Q86X51 503 aaPredicted RBP10.22□□□□□ -0.77
TRIM40-205ENST00000307859 ZDHHC23Q8IYP9 409 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 ZNF610Q8N9Z0 462 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 ZSCAN4Q8NAM6 433 aaPredicted RBP10.22□□□□□ -0.77
TRIM40-205ENST00000307859 NAXEQ8NCW5 288 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 GIMAP1Q8WWP7 306 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 HPSE2Q8WWQ2 592 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 ARHGAP5-AS1Q96IT6 56 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 OPN3Q9H1Y3 402 aaPredicted RBP10.22□□□□□ -0.77
TRIM40-205ENST00000307859 ELL3Q9HB65 397 aaPredicted RBP10.22□□□□□ -0.77
TRIM40-205ENST00000307859 CDH20Q9HBT6 801 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 OBP2BQ9NPH6 170 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 CRIM1Q9NZV1 1036 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 BOD1L1Q8NFC6 3051 aa10.22□□□□□ -0.77
TRIM40-205ENST00000307859 IGKV1-12A0A0C4DH73 117 aa10.21□□□□□ -0.78
TRIM40-205ENST00000307859 A0A1W2PR80 420 aa10.21□□□□□ -0.78
TRIM40-205ENST00000307859 ZNF736B4DX44 427 aaPredicted RBP10.21□□□□□ -0.78
TRIM40-205ENST00000307859 ARPC1BO15143 372 aaKnown RBP10.21□□□□□ -0.78
TRIM40-205ENST00000307859 CA11O75493 328 aa10.21□□□□□ -0.78
TRIM40-205ENST00000307859 IL2RAP01589 272 aa10.21□□□□□ -0.78
TRIM40-205ENST00000307859 IGKV1D-12P01611 117 aa10.21□□□□□ -0.78
TRIM40-205ENST00000307859 ZNF735P0CB33 412 aa10.21□□□□□ -0.78
TRIM40-205ENST00000307859 NAT1P18440 290 aa10.21□□□□□ -0.78
TRIM40-205ENST00000307859 MPZP25189 248 aa10.21□□□□□ -0.78
TRIM40-205ENST00000307859 CEACAM8P31997 349 aaPredicted RBP10.21□□□□□ -0.78
TRIM40-205ENST00000307859 GNG2P59768 71 aa10.21□□□□□ -0.78
TRIM40-205ENST00000307859 ARL6IP1Q15041 203 aa10.21□□□□□ -0.78
TRIM40-205ENST00000307859 RSU1Q15404 277 aa10.21□□□□□ -0.78
TRIM40-205ENST00000307859 CEACAM21Q3KPI0 293 aa10.21□□□□□ -0.78
TRIM40-205ENST00000307859 FBXW12Q6X9E4 464 aa10.21□□□□□ -0.78
TRIM40-205ENST00000307859 BEND4Q6ZU67 534 aa10.21□□□□□ -0.78
TRIM40-205ENST00000307859 RPRMLQ8N4K4 120 aa10.21□□□□□ -0.78
TRIM40-205ENST00000307859 OR51S1Q8NGJ8 323 aa10.21□□□□□ -0.78
TRIM40-205ENST00000307859 OR8S1Q8NH09 359 aa10.21□□□□□ -0.78
TRIM40-205ENST00000307859 ST8SIA4Q92187 359 aa10.21□□□□□ -0.78
TRIM40-205ENST00000307859 DVL3Q92997 716 aaPredicted RBP10.21□□□□□ -0.78
TRIM40-205ENST00000307859 FGF23Q9GZV9 251 aaPredicted RBP10.21□□□□□ -0.78
TRIM40-205ENST00000307859 OR10A4Q9H209 315 aa10.21□□□□□ -0.78
TRIM40-205ENST00000307859 NPDC1Q9NQX5 325 aaPredicted RBP10.21□□□□□ -0.78
TRIM40-205ENST00000307859 NKIRAS2Q9NYR9 191 aa10.21□□□□□ -0.78
TRIM40-205ENST00000307859 FLVCR2Q9UPI3 526 aa10.21□□□□□ -0.78
TRIM40-205ENST00000307859 A8MV72 311 aaPredicted RBP10.2□□□□□ -0.78
TRIM40-205ENST00000307859 AKR7A2O43488 359 aa10.2□□□□□ -0.78
TRIM40-205ENST00000307859 HTR3BO95264 441 aa10.2□□□□□ -0.78
TRIM40-205ENST00000307859 IGLV1-44P01699 117 aa10.2□□□□□ -0.78
TRIM40-205ENST00000307859 CSTBP04080 98 aaKnown RBP10.2□□□□□ -0.78
TRIM40-205ENST00000307859 FCER2P06734 321 aa10.2□□□□□ -0.78
TRIM40-205ENST00000307859 TBPP20226 339 aa10.2□□□□□ -0.78
TRIM40-205ENST00000307859 BLVRBP30043 206 aaPredicted RBP10.2□□□□□ -0.78
TRIM40-205ENST00000307859 HOXC12P31275 282 aa10.2□□□□□ -0.78
TRIM40-205ENST00000307859 MEF2DQ14814 521 aa10.2□□□□□ -0.78
TRIM40-205ENST00000307859 KRTAP21-3Q3LHN1 58 aa10.2□□□□□ -0.78
TRIM40-205ENST00000307859 CALHM1Q8IU99 346 aa10.2□□□□□ -0.78
TRIM40-205ENST00000307859 TCTE3Q8IZS6 198 aa10.2□□□□□ -0.78
TRIM40-205ENST00000307859 GVQW1Q8N7I0 195 aa10.2□□□□□ -0.78
TRIM40-205ENST00000307859 Q8NFD4 153 aa10.2□□□□□ -0.78
TRIM40-205ENST00000307859 MRPS24Q96EL2 167 aaKnown RBP10.2□□□□□ -0.78
TRIM40-205ENST00000307859 SLX1AQ9BQ83 275 aa10.2□□□□□ -0.78
TRIM40-205ENST00000307859 OCSTAMPQ9BR26 566 aa10.2□□□□□ -0.78
TRIM40-205ENST00000307859 PECRQ9BY49 303 aa10.2□□□□□ -0.78
TRIM40-205ENST00000307859 TINAGL1Q9GZM7 467 aaPredicted RBP10.2□□□□□ -0.78
TRIM40-205ENST00000307859 OR51J1Q9H342 316 aa10.2□□□□□ -0.78
TRIM40-205ENST00000307859 RANGRFQ9HD47 186 aaPredicted RBP10.2□□□□□ -0.78
TRIM40-205ENST00000307859 IFT46Q9NQC8 304 aa10.2□□□□□ -0.78
TRIM40-205ENST00000307859 SLC2A8Q9NY64 477 aa10.2□□□□□ -0.78
TRIM40-205ENST00000307859 EIF3KQ9UBQ5 218 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms