RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 COPS3Q9UNS2 423 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 NCBP2LA6PVI3 153 aaKnown RBP8.1□□□□□ -1.11
PTPRE-202ENST00000306042 GPX5O75715 221 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 MT-CO2P00403 227 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 IFNA10P01566 189 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 MFGE8Q08431 387 aaPredicted RBP8.1□□□□□ -1.11
PTPRE-202ENST00000306042 ARTNQ5T4W7 220 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 PRAMEF5Q5TYX0 476 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 PRAMEF6Q5VXH4 476 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 OR10R2Q8NGX6 335 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 RFESDQ8TAC1 157 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 C10orf35Q96D05 121 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 KCNK17Q96T54 332 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 UQCC2Q9BRT2 126 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 OR6C3Q9NZP0 311 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 ESPL1Q14674 2120 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 A0A1W2PRD5 423 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 A0A1W2PRF3 423 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 A0A1W2PRM7 423 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 RAB27BO00194 218 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 ZNF354AO60765 605 aaPredicted RBP8.09□□□□□ -1.11
PTPRE-202ENST00000306042 TOXO94900 526 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 GNB3P16520 340 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 NPY4RP50391 375 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 FAM27D1Q5T7N8 215 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 STEAP3Q658P3 488 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 ZBTB8BQ8NAP8 495 aaPredicted RBP8.09□□□□□ -1.11
PTPRE-202ENST00000306042 STOML3Q8TAV4 291 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 ZNF665Q9H7R5 613 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 HEYLQ9NQ87 328 aaPredicted RBP8.09□□□□□ -1.11
PTPRE-202ENST00000306042 NKX2-6A6NCS4 301 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 TMEM210A6NLX4 147 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 SERPINE3A8MV23 424 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 J3QT63 122 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 SSX4O60224 188 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 GOSR1O95249 250 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 LIMS3P0CW19 117 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 LIMS4P0CW20 117 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 RPL19P84098 196 aaKnown RBP8.09□□□□□ -1.11
PTPRE-202ENST00000306042 SLC25A47Q6Q0C1 308 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 Q6ZS92 163 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 H2BFWTQ7Z2G1 175 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 ZNF431Q8TF32 576 aaPredicted RBP8.09□□□□□ -1.11
PTPRE-202ENST00000306042 SLC25A46Q96AG3 418 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 GPA33Q99795 319 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 CHST6Q9GZX3 395 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 HEXA-AS1Q9H8Q6 139 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 CHODLQ9H9P2 273 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 PLEKHA3Q9HB20 300 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 CCDC88CQ9P219 2028 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 SH2D7A6NKC9 451 aaPredicted RBP8.09□□□□□ -1.11
PTPRE-202ENST00000306042 NPIPB9F8W1W9 429 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 TFP02787 698 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 TAS2R20P59543 309 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 CD276Q5ZPR3 534 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 TRAT1Q6PIZ9 186 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 MOB1BQ7L9L4 216 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 C12orf45Q8N5I9 185 aaPredicted RBP8.09□□□□□ -1.11
PTPRE-202ENST00000306042 OR5A2Q8NGI9 324 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 FAM222BQ8WU58 562 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 NUDCD2Q8WVJ2 157 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 DLL4Q9NR61 685 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 TNFRSF19Q9NS68 423 aa8.09□□□□□ -1.11
PTPRE-202ENST00000306042 AMMECR1Q9Y4X0 333 aaPredicted RBP8.09□□□□□ -1.11
PTPRE-202ENST00000306042 SHOXO15266 292 aa8.09□□□□□ -1.12
PTPRE-202ENST00000306042 IGF2P01344 180 aa8.09□□□□□ -1.12
PTPRE-202ENST00000306042 GNG10P50151 68 aa8.09□□□□□ -1.12
PTPRE-202ENST00000306042 LHX2P50458 406 aa8.09□□□□□ -1.12
PTPRE-202ENST00000306042 OR10A3P58181 314 aa8.09□□□□□ -1.12
PTPRE-202ENST00000306042 Q0VFX4 171 aa8.09□□□□□ -1.12
PTPRE-202ENST00000306042 PLA1AQ53H76 456 aa8.09□□□□□ -1.12
PTPRE-202ENST00000306042 FAHD2BQ6P2I3 314 aaPredicted RBP8.09□□□□□ -1.12
PTPRE-202ENST00000306042 NOXA1Q86UR1 476 aa8.09□□□□□ -1.12
PTPRE-202ENST00000306042 MAFIPQ8WZ33 124 aa8.09□□□□□ -1.12
PTPRE-202ENST00000306042 TMEM45BQ96B21 275 aa8.09□□□□□ -1.12
PTPRE-202ENST00000306042 FAHD2AQ96GK7 314 aa8.09□□□□□ -1.12
PTPRE-202ENST00000306042 SLC52A3Q9NQ40 469 aa8.09□□□□□ -1.12
PTPRE-202ENST00000306042 ZNF224Q9NZL3 707 aa8.09□□□□□ -1.12
PTPRE-202ENST00000306042 ZDHHC8Q9ULC8 765 aa8.09□□□□□ -1.12
PTPRE-202ENST00000306042 RNF150Q9ULK6 438 aa8.09□□□□□ -1.12
PTPRE-202ENST00000306042 ALG5Q9Y673 324 aa8.09□□□□□ -1.12
PTPRE-202ENST00000306042 A3GALT2U3KPV4 340 aa8.09□□□□□ -1.12
PTPRE-202ENST00000306042 MYO7BQ6PIF6 2116 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 TRAV1-2A0A0B4J238 106 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 B9A039 149 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 PLPP2O43688 288 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 SYNGR3O43761 229 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 TXNDC12O95881 172 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 CLDN18P56856 261 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 GABRA6Q16445 453 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 OR2B11Q5JQS5 317 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 PARP16Q8N5Y8 322 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 LINC00470Q9BZP3 86 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 SLC17A5Q9NRA2 495 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 PURGQ9UJV8 347 aaKnown RBP8.08□□□□□ -1.12
PTPRE-202ENST00000306042 SRCAPQ6ZRS2 3230 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 ALPK2Q86TB3 2170 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 IGKV1D-42A0A075B6H8 117 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 F5H5P2 479 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 GCM2O75603 506 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms