RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 NLKQ9UBE8 527 aa9.26□□□□□ -0.93
CLCC1-201ENST00000302500 IGHV3OR16-10A0A075B7F0 116 aa9.25□□□□□ -0.93
CLCC1-201ENST00000302500 LOC107986453A0A1B0GWG9 222 aa9.25□□□□□ -0.93
CLCC1-201ENST00000302500 OR2AT4A6NND4 320 aa9.25□□□□□ -0.93
CLCC1-201ENST00000302500 J3QT63 122 aa9.25□□□□□ -0.93
CLCC1-201ENST00000302500 ZNF737O75373 536 aa9.25□□□□□ -0.93
CLCC1-201ENST00000302500 RPP14O95059 124 aaKnown RBP9.25□□□□□ -0.93
CLCC1-201ENST00000302500 ECDO95905 644 aaPredicted RBP9.25□□□□□ -0.93
CLCC1-201ENST00000302500 RNASE1P07998 156 aaKnown RBP9.25□□□□□ -0.93
CLCC1-201ENST00000302500 IL24Q13007 206 aa9.25□□□□□ -0.93
CLCC1-201ENST00000302500 GALEQ14376 348 aa9.25□□□□□ -0.93
CLCC1-201ENST00000302500 SLC9A3R2Q15599 337 aa9.25□□□□□ -0.93
CLCC1-201ENST00000302500 SMN1Q16637 294 aaKnown RBP9.25□□□□□ -0.93
CLCC1-201ENST00000302500 ARMCX4Q5H9R4 360 aa9.25□□□□□ -0.93
CLCC1-201ENST00000302500 ZNF691Q5VV52 312 aa9.25□□□□□ -0.93
CLCC1-201ENST00000302500 CD276Q5ZPR3 534 aa9.25□□□□□ -0.93
CLCC1-201ENST00000302500 PLCXD3Q63HM9 321 aa9.25□□□□□ -0.93
CLCC1-201ENST00000302500 ZNF529Q6P280 563 aa9.25□□□□□ -0.93
CLCC1-201ENST00000302500 HAGHLQ6PII5 290 aaPredicted RBP9.25□□□□□ -0.93
CLCC1-201ENST00000302500 BTNL3Q6UXE8 466 aa9.25□□□□□ -0.93
CLCC1-201ENST00000302500 BRD3OSQ6XYD6 125 aa9.25□□□□□ -0.93
CLCC1-201ENST00000302500 ZBTB49Q6ZSB9 765 aa9.25□□□□□ -0.93
CLCC1-201ENST00000302500 SYS1Q8N2H4 156 aa9.25□□□□□ -0.93
CLCC1-201ENST00000302500 ACBD7Q8N6N7 88 aa9.25□□□□□ -0.93
CLCC1-201ENST00000302500 KIR3DL3Q8N743 410 aa9.25□□□□□ -0.93
CLCC1-201ENST00000302500 YIPF7Q8N8F6 280 aa9.25□□□□□ -0.93
CLCC1-201ENST00000302500 ZNF418Q8TF45 676 aaPredicted RBP9.25□□□□□ -0.93
CLCC1-201ENST00000302500 RGP1Q92546 391 aaPredicted RBP9.25□□□□□ -0.93
CLCC1-201ENST00000302500 C10orf35Q96D05 121 aa9.25□□□□□ -0.93
CLCC1-201ENST00000302500 PKIBQ9C010 78 aa9.25□□□□□ -0.93
CLCC1-201ENST00000302500 FGF20Q9NP95 211 aaPredicted RBP9.25□□□□□ -0.93
CLCC1-201ENST00000302500 SNTG1Q9NSN8 517 aa9.25□□□□□ -0.93
CLCC1-201ENST00000302500 ERVK13-1Q9NX77 482 aa9.25□□□□□ -0.93
CLCC1-201ENST00000302500 MTCH1Q9NZJ7 389 aa9.25□□□□□ -0.93
CLCC1-201ENST00000302500 KPTNQ9Y664 436 aa9.25□□□□□ -0.93
CLCC1-201ENST00000302500 ANKRD61A6NGH8 418 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 RNASEK-C17orf49H0YIS7 233 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 UBCP0CG48 685 aaKnown RBP9.24□□□□□ -0.93
CLCC1-201ENST00000302500 PRTN3P24158 256 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 PEX2P28328 305 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 DLX1P56177 255 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 DLX6P56179 175 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 BPIFB3P59826 476 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 ACTC1P68032 377 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 ACTA1P68133 377 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 SCGB2A2Q13296 93 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 ZSCAN26Q16670 478 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 DEFB112Q30KQ8 113 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 LPCAT4Q643R3 524 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 RUSC1-AS1Q66K80 236 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 XAF1Q6GPH4 301 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 C1orf122Q6ZSJ8 110 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 MOB3CQ70IA8 216 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 UTS2BQ765I0 119 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 TCF23Q7RTU1 214 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 KCTD20Q7Z5Y7 419 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 THAP5Q7Z6K1 395 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 ZNRF1Q8ND25 227 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 CCDC54Q8NEL0 328 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 OR52I1Q8NGK6 324 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 SEBOXQ9HB31 216 aaPredicted RBP9.24□□□□□ -0.93
CLCC1-201ENST00000302500 AMBNQ9NP70 447 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 IMPAD1Q9NX62 359 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 SMPD3Q9NY59 655 aaPredicted RBP9.24□□□□□ -0.93
CLCC1-201ENST00000302500 RASL12Q9NYN1 266 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 GMPPBQ9Y5P6 360 aa9.24□□□□□ -0.93
CLCC1-201ENST00000302500 IGKV1-12A0A0C4DH73 117 aa9.23□□□□□ -0.93
CLCC1-201ENST00000302500 CLIC3O95833 236 aa9.23□□□□□ -0.93
CLCC1-201ENST00000302500 IGKV1D-12P01611 117 aa9.23□□□□□ -0.93
CLCC1-201ENST00000302500 MT-ND2P03891 347 aa9.23□□□□□ -0.93
CLCC1-201ENST00000302500 GLRA1P23415 457 aa9.23□□□□□ -0.93
CLCC1-201ENST00000302500 HAAOP46952 286 aa9.23□□□□□ -0.93
CLCC1-201ENST00000302500 IL13RA1P78552 427 aa9.23□□□□□ -0.93
CLCC1-201ENST00000302500 RAB40BQ12829 278 aa9.23□□□□□ -0.93
CLCC1-201ENST00000302500 ODF4Q2M2E3 257 aa9.23□□□□□ -0.93
CLCC1-201ENST00000302500 OGFRL1Q5TC84 451 aaPredicted RBP9.23□□□□□ -0.93
CLCC1-201ENST00000302500 SLC36A1Q7Z2H8 476 aa9.23□□□□□ -0.93
CLCC1-201ENST00000302500 ANGPTL5Q86XS5 388 aa9.23□□□□□ -0.93
CLCC1-201ENST00000302500 LDLRAD3Q86YD5 345 aa9.23□□□□□ -0.93
CLCC1-201ENST00000302500 BPIFB2Q8N4F0 458 aa9.23□□□□□ -0.93
CLCC1-201ENST00000302500 PNLDC1Q8NA58 520 aaKnown RBP9.23□□□□□ -0.93
CLCC1-201ENST00000302500 DNAAF1Q8NEP3 725 aa9.23□□□□□ -0.93
CLCC1-201ENST00000302500 C4orf36Q96KX1 117 aa9.23□□□□□ -0.93
CLCC1-201ENST00000302500 CNTD2Q9H8S5 307 aa9.23□□□□□ -0.93
CLCC1-201ENST00000302500 ELL3Q9HB65 397 aaPredicted RBP9.23□□□□□ -0.93
CLCC1-201ENST00000302500 GNG8Q9UK08 70 aa9.23□□□□□ -0.93
CLCC1-201ENST00000302500 MEGF8Q7Z7M0 2845 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 IGHV1-69DA0A0B4J2H0 117 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 H3BSH0 61 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 SYT7O43581 403 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 MPZL2O60487 215 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 TOX4O94842 621 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 ALX3O95076 343 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 ZFPL1O95159 310 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 LALBAP00709 142 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 IGHV1-69P01742 117 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 GNAO1P09471 354 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 HKR1P10072 659 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 FPR2P25090 351 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 CEBPDP49716 269 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms