RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 PTBP1P26599 531 aaKnown RBP eCLIP17.86■□□□□ 0.45
SMCO4-201ENST00000298966 WNT5AP41221 380 aa17.86■□□□□ 0.45
SMCO4-201ENST00000298966 FBXW12Q6X9E4 464 aa17.86■□□□□ 0.45
SMCO4-201ENST00000298966 C3orf56Q8N813 242 aa17.86■□□□□ 0.45
SMCO4-201ENST00000298966 OR6M1Q8NGM8 313 aa17.86■□□□□ 0.45
SMCO4-201ENST00000298966 OR2AE1Q8NHA4 323 aa17.86■□□□□ 0.45
SMCO4-201ENST00000298966 TRMT10AQ8TBZ6 339 aaKnown RBP17.86■□□□□ 0.45
SMCO4-201ENST00000298966 RABL2AQ9UBK7 228 aaPredicted RBP17.86■□□□□ 0.45
SMCO4-201ENST00000298966 STEAP1Q9UHE8 339 aa17.86■□□□□ 0.45
SMCO4-201ENST00000298966 RABL2BQ9UNT1 228 aa17.86■□□□□ 0.45
SMCO4-201ENST00000298966 SPEF1Q9Y4P9 236 aa17.86■□□□□ 0.45
SMCO4-201ENST00000298966 V9GYH0 126 aa17.86■□□□□ 0.45
SMCO4-201ENST00000298966 C5orf63A6NC05 138 aa17.85■□□□□ 0.45
SMCO4-201ENST00000298966 HPGDSO60760 199 aa17.85■□□□□ 0.45
SMCO4-201ENST00000298966 VENTXO95231 258 aa17.85■□□□□ 0.45
SMCO4-201ENST00000298966 CECR9P0C854 216 aa17.85■□□□□ 0.45
SMCO4-201ENST00000298966 CCL2P13500 99 aa17.85■□□□□ 0.45
SMCO4-201ENST00000298966 SELEP16581 610 aa17.85■□□□□ 0.45
SMCO4-201ENST00000298966 PRKACBP22694 351 aa17.85■□□□□ 0.45
SMCO4-201ENST00000298966 SERPINF1P36955 418 aa17.85■□□□□ 0.45
SMCO4-201ENST00000298966 EVX1P49640 407 aa17.85■□□□□ 0.45
SMCO4-201ENST00000298966 ACTG1P63261 375 aa17.85■□□□□ 0.45
SMCO4-201ENST00000298966 RIN1Q13671 783 aa17.85■□□□□ 0.45
SMCO4-201ENST00000298966 GK2Q14410 553 aaPredicted RBP17.85■□□□□ 0.45
SMCO4-201ENST00000298966 C1orf100Q5SVJ3 147 aa17.85■□□□□ 0.45
SMCO4-201ENST00000298966 CLVS2Q5SYC1 327 aa17.85■□□□□ 0.45
SMCO4-201ENST00000298966 TMEM42Q69YG0 159 aa17.85■□□□□ 0.45
SMCO4-201ENST00000298966 C16orf87Q6PH81 154 aa17.85■□□□□ 0.45
SMCO4-201ENST00000298966 LRRC28Q86X40 367 aaPredicted RBP17.85■□□□□ 0.45
SMCO4-201ENST00000298966 ZNF671Q8TAW3 534 aa17.85■□□□□ 0.45
SMCO4-201ENST00000298966 HPS1Q92902 700 aa17.85■□□□□ 0.45
SMCO4-201ENST00000298966 METTL17Q9H7H0 456 aaPredicted RBP17.85■□□□□ 0.45
SMCO4-201ENST00000298966 SPATA2Q9UM82 520 aa17.85■□□□□ 0.45
SMCO4-201ENST00000298966 STARD10Q9Y365 291 aa17.85■□□□□ 0.45
SMCO4-201ENST00000298966 IGHV1-18A0A0C4DH31 117 aa17.84■□□□□ 0.45
SMCO4-201ENST00000298966 B9A039 149 aa17.84■□□□□ 0.45
SMCO4-201ENST00000298966 CRYAAP02489 173 aa17.84■□□□□ 0.45
SMCO4-201ENST00000298966 CELA3BP08861 270 aa17.84■□□□□ 0.45
SMCO4-201ENST00000298966 OCMP0CE72 109 aaPredicted RBP17.84■□□□□ 0.45
SMCO4-201ENST00000298966 ANOS1P23352 680 aa17.84■□□□□ 0.45
SMCO4-201ENST00000298966 UCP2P55851 309 aa17.84■□□□□ 0.45
SMCO4-201ENST00000298966 PPP1CBP62140 327 aa17.84■□□□□ 0.45
SMCO4-201ENST00000298966 OR13C9Q8NGT0 318 aa17.84■□□□□ 0.45
SMCO4-201ENST00000298966 DIRAS2Q96HU8 199 aa17.84■□□□□ 0.45
SMCO4-201ENST00000298966 SOSTQ9BQB4 213 aa17.84■□□□□ 0.45
SMCO4-201ENST00000298966 RAB1BQ9H0U4 201 aa17.84■□□□□ 0.45
SMCO4-201ENST00000298966 GGT3PA6NGU5 568 aa17.83■□□□□ 0.44
SMCO4-201ENST00000298966 CST4P01036 141 aa17.83■□□□□ 0.44
SMCO4-201ENST00000298966 NGFP01138 241 aa17.83■□□□□ 0.44
SMCO4-201ENST00000298966 APOA1P02647 267 aa17.83■□□□□ 0.44
SMCO4-201ENST00000298966 RAC2P15153 192 aa17.83■□□□□ 0.44
SMCO4-201ENST00000298966 FAHP16930 419 aa17.83■□□□□ 0.44
SMCO4-201ENST00000298966 NAAAQ02083 359 aa17.83■□□□□ 0.44
SMCO4-201ENST00000298966 RAB11BQ15907 218 aa17.83■□□□□ 0.44
SMCO4-201ENST00000298966 CNIH2Q6PI25 160 aa17.83■□□□□ 0.44
SMCO4-201ENST00000298966 RFPL4BQ6ZWI9 263 aa17.83■□□□□ 0.44
SMCO4-201ENST00000298966 ZNF101Q8IZC7 436 aa17.83■□□□□ 0.44
SMCO4-201ENST00000298966 PAQR4Q8N4S7 273 aaPredicted RBP17.83■□□□□ 0.44
SMCO4-201ENST00000298966 SAMD12Q8N8I0 201 aa17.83■□□□□ 0.44
SMCO4-201ENST00000298966 DNAAF1Q8NEP3 725 aa17.83■□□□□ 0.44
SMCO4-201ENST00000298966 CCDC32Q9BV29 185 aa17.83■□□□□ 0.44
SMCO4-201ENST00000298966 CYSLTR2Q9NS75 346 aa17.83■□□□□ 0.44
SMCO4-201ENST00000298966 PTTG3PQ9NZH4 202 aa17.83■□□□□ 0.44
SMCO4-201ENST00000298966 IGHV2OR16-5A0A0B4J2B6 119 aa17.82■□□□□ 0.44
SMCO4-201ENST00000298966 SNRPBP14678 240 aaKnown RBP17.82■□□□□ 0.44
SMCO4-201ENST00000298966 ELK1P19419 428 aa17.82■□□□□ 0.44
SMCO4-201ENST00000298966 ACKR3P25106 362 aa17.82■□□□□ 0.44
SMCO4-201ENST00000298966 GIFP27352 417 aa17.82■□□□□ 0.44
SMCO4-201ENST00000298966 HTR2CP28335 458 aa17.82■□□□□ 0.44
SMCO4-201ENST00000298966 IL2RGP31785 369 aa17.82■□□□□ 0.44
SMCO4-201ENST00000298966 COMPP49747 757 aaPredicted RBP17.82■□□□□ 0.44
SMCO4-201ENST00000298966 PPOXP50336 477 aa17.82■□□□□ 0.44
SMCO4-201ENST00000298966 RPS23P62266 143 aaKnown RBP17.82■□□□□ 0.44
SMCO4-201ENST00000298966 HES5Q5TA89 166 aa17.82■□□□□ 0.44
SMCO4-201ENST00000298966 LYPD6Q86Y78 171 aa17.82■□□□□ 0.44
SMCO4-201ENST00000298966 OR5AS1Q8N127 324 aa17.82■□□□□ 0.44
SMCO4-201ENST00000298966 PNLDC1Q8NA58 520 aaKnown RBP17.82■□□□□ 0.44
SMCO4-201ENST00000298966 OR51A2Q8NGJ7 313 aa17.82■□□□□ 0.44
SMCO4-201ENST00000298966 CA10Q9NS85 328 aa17.82■□□□□ 0.44
SMCO4-201ENST00000298966 GHRLQ9UBU3 117 aa17.82■□□□□ 0.44
SMCO4-201ENST00000298966 FBXO9Q9UK97 447 aaPredicted RBP17.82■□□□□ 0.44
SMCO4-201ENST00000298966 SLC7A11Q9UPY5 501 aa17.82■□□□□ 0.44
SMCO4-201ENST00000298966 NOP16Q9Y3C1 178 aaKnown RBP17.82■□□□□ 0.44
SMCO4-201ENST00000298966 FABP12A6NFH5 140 aa17.81■□□□□ 0.44
SMCO4-201ENST00000298966 LILRA1O75019 489 aa17.81■□□□□ 0.44
SMCO4-201ENST00000298966 TPPPO94811 219 aa17.81■□□□□ 0.44
SMCO4-201ENST00000298966 PAHP00439 452 aa17.81■□□□□ 0.44
SMCO4-201ENST00000298966 NRASP01111 189 aa17.81■□□□□ 0.44
SMCO4-201ENST00000298966 HCKP08631 526 aa17.81■□□□□ 0.44
SMCO4-201ENST00000298966 UBBP0CG47 229 aa17.81■□□□□ 0.44
SMCO4-201ENST00000298966 DAOP14920 347 aa17.81■□□□□ 0.44
SMCO4-201ENST00000298966 ZNF93P35789 620 aaPredicted RBP17.81■□□□□ 0.44
SMCO4-201ENST00000298966 TALDO1P37837 337 aa17.81■□□□□ 0.44
SMCO4-201ENST00000298966 DVL1P1P54792 670 aaPredicted RBP17.81■□□□□ 0.44
SMCO4-201ENST00000298966 FAM189A2Q15884 450 aa17.81■□□□□ 0.44
SMCO4-201ENST00000298966 ZNF181Q2M3W8 571 aa17.81■□□□□ 0.44
SMCO4-201ENST00000298966 UBE2NLQ5JXB2 153 aa17.81■□□□□ 0.44
SMCO4-201ENST00000298966 FAM131AQ6UXB0 335 aa17.81■□□□□ 0.44
SMCO4-201ENST00000298966 BAIAP2L2Q6UXY1 529 aa17.81■□□□□ 0.44
SMCO4-201ENST00000298966 LHFPL2Q6ZUX7 228 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms