RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 TECTBQ96PL2 329 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 C7orf50Q9BRJ6 194 aaKnown RBP13.42□□□□□ -0.26
LSM6-201ENST00000296581 MARVELD1Q9BSK0 173 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 SESN1Q9Y6P5 492 aa13.42□□□□□ -0.26
LSM6-201ENST00000296581 KRBOX1C9JBD0 128 aa13.41□□□□□ -0.26
LSM6-201ENST00000296581 RAB27BO00194 218 aa13.41□□□□□ -0.26
LSM6-201ENST00000296581 SLC34A2O95436 690 aa13.41□□□□□ -0.26
LSM6-201ENST00000296581 CBR1P16152 277 aa13.41□□□□□ -0.26
LSM6-201ENST00000296581 MYPOPQ86VE0 399 aaPredicted RBP13.41□□□□□ -0.26
LSM6-201ENST00000296581 CXorf67Q86X51 503 aaPredicted RBP13.41□□□□□ -0.26
LSM6-201ENST00000296581 OR11H4Q8NGC9 324 aa13.41□□□□□ -0.26
LSM6-201ENST00000296581 OR4D10Q8NGI6 311 aa13.41□□□□□ -0.26
LSM6-201ENST00000296581 KCNG3Q8TAE7 436 aa13.41□□□□□ -0.26
LSM6-201ENST00000296581 FAM46BQ96A09 425 aa13.41□□□□□ -0.26
LSM6-201ENST00000296581 NUDT16L1Q9BRJ7 211 aaKnown RBP13.41□□□□□ -0.26
LSM6-201ENST00000296581 SFXN3Q9BWM7 321 aa13.41□□□□□ -0.26
LSM6-201ENST00000296581 OBP2BQ9NPH6 170 aa13.41□□□□□ -0.26
LSM6-201ENST00000296581 NLKQ9UBE8 527 aa13.41□□□□□ -0.26
LSM6-201ENST00000296581 A0A1W2PR80 420 aa13.41□□□□□ -0.26
LSM6-201ENST00000296581 SCGNO76038 276 aa13.41□□□□□ -0.26
LSM6-201ENST00000296581 SNAPINO95295 136 aa13.41□□□□□ -0.26
LSM6-201ENST00000296581 GLI4P10075 376 aa13.41□□□□□ -0.26
LSM6-201ENST00000296581 SLC6A1P30531 599 aa13.41□□□□□ -0.26
LSM6-201ENST00000296581 BTCP35070 178 aa13.41□□□□□ -0.26
LSM6-201ENST00000296581 MOGAT2Q3SYC2 334 aa13.41□□□□□ -0.26
LSM6-201ENST00000296581 MRPL21Q7Z2W9 205 aaKnown RBP13.41□□□□□ -0.26
LSM6-201ENST00000296581 DOLPP1Q86YN1 238 aa13.41□□□□□ -0.26
LSM6-201ENST00000296581 CPNE2Q96FN4 548 aaPredicted RBP13.41□□□□□ -0.26
LSM6-201ENST00000296581 BCL2L14Q9BZR8 327 aa13.41□□□□□ -0.26
LSM6-201ENST00000296581 POFUT1Q9H488 388 aa13.41□□□□□ -0.26
LSM6-201ENST00000296581 PTTG3PQ9NZH4 202 aa13.41□□□□□ -0.26
LSM6-201ENST00000296581 KLK11Q9UBX7 282 aa13.41□□□□□ -0.26
LSM6-201ENST00000296581 KIF25Q9UIL4 384 aa13.41□□□□□ -0.26
LSM6-201ENST00000296581 ZNF835Q9Y2P0 537 aa13.41□□□□□ -0.26
LSM6-201ENST00000296581 FAM240BA0A1B0GVZ2 78 aa13.4□□□□□ -0.26
LSM6-201ENST00000296581 TUBAL3A6NHL2 446 aa13.4□□□□□ -0.26
LSM6-201ENST00000296581 C1QTNF9BB2RNN3 333 aa13.4□□□□□ -0.26
LSM6-201ENST00000296581 PRRG2O14669 202 aa13.4□□□□□ -0.26
LSM6-201ENST00000296581 CDC14BO60729 498 aa13.4□□□□□ -0.26
LSM6-201ENST00000296581 ECDO95905 644 aaPredicted RBP13.4□□□□□ -0.26
LSM6-201ENST00000296581 CFDP00746 253 aaPredicted RBP13.4□□□□□ -0.26
LSM6-201ENST00000296581 GLAP06280 429 aa13.4□□□□□ -0.26
LSM6-201ENST00000296581 CELA3BP08861 270 aa13.4□□□□□ -0.26
LSM6-201ENST00000296581 C1QTNF9P0C862 333 aa13.4□□□□□ -0.26
LSM6-201ENST00000296581 HOXC12P31275 282 aa13.4□□□□□ -0.26
LSM6-201ENST00000296581 ZP1P60852 638 aa13.4□□□□□ -0.26
LSM6-201ENST00000296581 METTL11BQ5VVY1 283 aa13.4□□□□□ -0.26
LSM6-201ENST00000296581 LHFPL2Q6ZUX7 228 aa13.4□□□□□ -0.26
LSM6-201ENST00000296581 TMEM104Q8NE00 496 aa13.4□□□□□ -0.26
LSM6-201ENST00000296581 OR56B2PQ8NGI1 322 aa13.4□□□□□ -0.26
LSM6-201ENST00000296581 TNFAIP8L1Q8WVP5 186 aa13.4□□□□□ -0.26
LSM6-201ENST00000296581 GAL3ST1Q99999 423 aa13.4□□□□□ -0.26
LSM6-201ENST00000296581 ESRP2Q9H6T0 727 aaKnown RBP13.4□□□□□ -0.26
LSM6-201ENST00000296581 ANKRD20A5PA0PJZ0 165 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 H7C417 338 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 SULT1C2O00338 296 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 IGKV3-15P01624 115 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 PRSS3P35030 304 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 IDH3GP51553 393 aaPredicted RBP13.39□□□□□ -0.27
LSM6-201ENST00000296581 MTCP1P56278 107 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 HLXQ14774 488 aaPredicted RBP13.39□□□□□ -0.27
LSM6-201ENST00000296581 FCN2Q15485 313 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 GFRALQ6UXV0 394 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 C3P1Q6ZMU1 363 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 C1QL2Q7Z5L3 287 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 ACBD4Q8NC06 268 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 OR5D18Q8NGL1 313 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 OR5L1Q8NGL2 311 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 PIGCQ92535 297 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 TINAGL1Q9GZM7 467 aaPredicted RBP13.39□□□□□ -0.27
LSM6-201ENST00000296581 LPAR5Q9H1C0 372 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 MTFP1Q9UDX5 166 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 MAB21L2Q9Y586 359 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 BOD1L1Q8NFC6 3051 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 IGKV1-27A0A075B6S5 117 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 WIPF3A6NGB9 483 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 DNASE2O00115 360 aaPredicted RBP13.39□□□□□ -0.27
LSM6-201ENST00000296581 PLATP00750 562 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 CST4P01036 141 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 CHRM2P08172 466 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 RBP2P50120 134 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 FUT6P51993 359 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 AP3S2P59780 193 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 MRPL49Q13405 166 aaKnown RBP13.39□□□□□ -0.27
LSM6-201ENST00000296581 FAM189A2Q15884 450 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 PLA1AQ53H76 456 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 ZNF474Q6S9Z5 364 aaPredicted RBP13.39□□□□□ -0.27
LSM6-201ENST00000296581 C17orf107Q6ZR85 190 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 BHLHA15Q7RTS1 189 aaPredicted RBP13.39□□□□□ -0.27
LSM6-201ENST00000296581 CSNK2A3Q8NEV1 391 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 OR5T2Q8NGG2 359 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 GPX8Q8TED1 209 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 BORCS8Q96FH0 119 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 TMEM59Q9BXS4 323 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 CST11Q9H112 138 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 ASF1BQ9NVP2 202 aa13.39□□□□□ -0.27
LSM6-201ENST00000296581 MPIG6BO95866 241 aa13.38□□□□□ -0.27
LSM6-201ENST00000296581 SSTR2P30874 369 aa13.38□□□□□ -0.27
LSM6-201ENST00000296581 ZNF81P51508 661 aa13.38□□□□□ -0.27
LSM6-201ENST00000296581 SSBP1Q04837 148 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms