RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 LIMS3P0CW19 117 aa15.67■□□□□ 0.1
CDC42EP3-201ENST00000295324 LIMS4P0CW20 117 aa15.67■□□□□ 0.1
CDC42EP3-201ENST00000295324 PI3P19957 117 aa15.67■□□□□ 0.1
CDC42EP3-201ENST00000295324 S100A11P31949 105 aa15.67■□□□□ 0.1
CDC42EP3-201ENST00000295324 PPT1P50897 306 aa15.67■□□□□ 0.1
CDC42EP3-201ENST00000295324 ETFDHQ16134 617 aa15.67■□□□□ 0.1
CDC42EP3-201ENST00000295324 STUMQ69YW2 141 aa15.67■□□□□ 0.1
CDC42EP3-201ENST00000295324 OR8D4Q8NGM9 314 aa15.67■□□□□ 0.1
CDC42EP3-201ENST00000295324 HLA-DOBP13765 273 aa15.67■□□□□ 0.1
CDC42EP3-201ENST00000295324 ACP1P24666 158 aa15.67■□□□□ 0.1
CDC42EP3-201ENST00000295324 CREB3L2Q70SY1 520 aa15.67■□□□□ 0.1
CDC42EP3-201ENST00000295324 MITD1Q8WV92 249 aa15.67■□□□□ 0.1
CDC42EP3-201ENST00000295324 AKR1E2Q96JD6 320 aa15.67■□□□□ 0.1
CDC42EP3-201ENST00000295324 PUS1Q9Y606 427 aaKnown RBP eCLIP15.67■□□□□ 0.1
CDC42EP3-201ENST00000295324 BGLAPP02818 100 aa15.67■□□□□ 0.1
CDC42EP3-201ENST00000295324 PLPPR5Q32ZL2 321 aa15.67■□□□□ 0.1
CDC42EP3-201ENST00000295324 AQP7O14520 342 aa15.67■□□□□ 0.1
CDC42EP3-201ENST00000295324 IGFBP7Q16270 282 aa15.67■□□□□ 0.1
CDC42EP3-201ENST00000295324 PDCD6O75340 191 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 HRASP01112 189 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 COX6B1P14854 86 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 ZCCHC14Q8WYQ9 949 aaKnown RBP15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 DDOQ99489 341 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 TMEM38BQ9NVV0 291 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 LRP3O75074 770 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 PSMB3P49720 205 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 P2RY6Q15077 328 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 OR8B3Q8NGG8 313 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 OR10V1Q8NGI7 309 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 POM121L2Q96KW2 1035 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 OR8B2Q96RD0 313 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 OR2H1Q9GZK4 316 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 IGLV3-19P01714 112 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 CELA2AP08217 269 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 ID4P47928 161 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 TAS2R45P59539 299 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 LYG1Q8N1E2 194 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 SMIM4Q8WVI0 70 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 ZNF75AQ96N20 296 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 C20orf202A1L168 122 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 RAB19A4D1S5 217 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 KRBOX1C9JBD0 128 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 OR5G3P0C626 314 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 NPBWR1P48145 328 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 HMGN3Q15651 99 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 CCDC71Q8IV32 467 aaPredicted RBP15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 TMEM229BQ8NBD8 167 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 RFESDQ8TAC1 157 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 MED30Q96HR3 178 aa15.66■□□□□ 0.1
CDC42EP3-201ENST00000295324 HABP2Q14520 560 aaPredicted RBP15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 C10orf35Q96D05 121 aa15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 TO15178 435 aa15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 GIPP09681 153 aaPredicted RBP15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 OR10J4P0C629 311 aa15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 GNG10P50151 68 aa15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 RSPO4Q2I0M5 234 aaPredicted RBP15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 FAM214BQ7L5A3 538 aa15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 PLPPR2Q96GM1 343 aa15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 A0A0J9YW62 118 aa15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 COX7A1P24310 79 aa15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 TESK1Q15569 626 aa15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 OR8B12Q8NGG6 310 aa15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 OR2G3Q8NGZ4 309 aa15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 PTDSS2Q9BVG9 487 aa15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 AUNIPQ9H7T9 357 aa15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 HES4Q9HCC6 221 aa15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 PRR33A8MZF0 331 aa15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 BAMBIQ13145 260 aa15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 SNTB1Q13884 538 aaKnown RBP15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 PLEKHB1Q9UF11 243 aaPredicted RBP15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 TET1Q8NFU7 2136 aa15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 PLXNA1Q9UIW2 1896 aa15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 HIST1H1DP16402 221 aaKnown RBP15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 HIKESHIQ53FT3 197 aa15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 PATZ1Q9HBE1 687 aaKnown RBP15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 ERRFI1Q9UJM3 462 aaPredicted RBP15.65■□□□□ 0.1
CDC42EP3-201ENST00000295324 ACSM4P0C7M7 580 aa15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 SCAND1P57086 179 aa15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 PMP22Q01453 160 aa15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 C1orf174Q8IYL3 243 aa15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 GNPNAT1Q96EK6 184 aaPredicted RBP15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 TAAR5O14804 337 aa15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 CEACAM6P40199 344 aa15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 PDCD1Q15116 288 aa15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 MFSD4AQ8N468 514 aa15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 OR4D11Q8NGI4 311 aa15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 PIK3IP1Q96FE7 263 aa15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 TMEM56Q96MV1 263 aa15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 RNF7Q9UBF6 113 aa15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 ZFP92A6NM28 416 aa15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 DTYMKP23919 212 aa15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 F2RP25116 425 aa15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 ELLP55199 621 aaPredicted RBP15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 BPIFB3P59826 476 aa15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 TLE1Q04724 770 aa15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 ZNF816Q0VGE8 651 aaPredicted RBP15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 RTP5Q14D33 572 aa15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 MAMSTRQ6ZN01 415 aa15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 OR4S1Q8NGB4 309 aa15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 TINAGL1Q9GZM7 467 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms