RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 BTNL3Q6UXE8 466 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 WFDC8Q8IUA0 241 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 OSR2Q8N2R0 312 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 D2HGDHQ8N465 521 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 DUSP18Q8NEJ0 188 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 OR1S2Q8NGQ3 325 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 C14orf79Q96F83 325 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 GNG13Q9P2W3 67 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 MTFP1Q9UDX5 166 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 KIF25Q9UIL4 384 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 ZGRF1Q86YA3 2104 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 IGKV1D-42A0A075B6H8 117 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 SLC22A20A6NK97 555 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 ACTL6BO94805 426 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 IFNA10P01566 189 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 ZNF83P51522 516 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 ERVK-16P61578 105 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 ADPRHL1Q8NDY3 354 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 PHYHIPQ92561 330 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 PLEKHA3Q9HB20 300 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 DYNLRB1Q9NP97 96 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 TMEM9BQ9NQ34 198 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 KLK10O43240 276 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 TCEAL7Q9BRU2 100 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 SOX7Q9BT81 388 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 HDGFL3Q9Y3E1 203 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 INTS1Q8N201 2190 aaKnown RBP4.23□□□□□ -1.73
UBR1-201ENST00000290650 IGKV1D-43A0A0B4J1Z2 117 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 ANKRD20A5PA0PJZ0 165 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 C9orf170A2RU37 121 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 H3BUI4 141 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 ARPC3O15145 178 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 PIN1P1O15428 100 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 HOXA1P49639 335 aaPredicted RBP4.22□□□□□ -1.73
UBR1-201ENST00000290650 RAB5BP61020 215 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 EGR4Q05215 589 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 RAB32Q13637 225 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 SNTB1Q13884 538 aaKnown RBP4.22□□□□□ -1.73
UBR1-201ENST00000290650 TMEM255AQ5JRV8 349 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 LAMTOR1Q6IAA8 161 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 ZDHHC23Q8IYP9 409 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 OR11H4Q8NGC9 324 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 OR1J1Q8NGS3 322 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 OR8U1Q8NH10 309 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 MARC2Q969Z3 335 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 AKR1E2Q96JD6 320 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 BCO1Q9HAY6 547 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 GPR160Q9UJ42 338 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 KLK13Q9UKR3 277 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 ADAMTS9Q9P2N4 1935 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 C3orf80F5H4A9 247 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 UPK3AO75631 287 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 OR5AC1P0C628 307 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 RPL12P30050 165 aaKnown RBP4.22□□□□□ -1.73
UBR1-201ENST00000290650 UBE2KP61086 200 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 ADAM5Q6NVV9 412 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 Q6ZRG5 221 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 NR2C2APQ86WQ0 139 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 RNF141Q8WVD5 230 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 RTN4IP1Q8WWV3 396 aaPredicted RBP4.22□□□□□ -1.73
UBR1-201ENST00000290650 WDR13Q9H1Z4 485 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 SPACA1Q9HBV2 294 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 TP53TG5Q9Y2B4 290 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 A0A1W2PQM1 296 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 GNB1P62873 340 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 C19orf48Q6RUI8 117 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 CATSPERDQ86XM0 798 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 OR2Z1Q8NG97 314 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 BIN3Q9NQY0 253 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 TCFL5Q9UL49 500 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 RCL1Q9Y2P8 373 aaKnown RBP4.22□□□□□ -1.73
UBR1-201ENST00000290650 SF3B6Q9Y3B4 125 aaKnown RBP4.22□□□□□ -1.73
UBR1-201ENST00000290650 TMEM265A0A087WTH1 108 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 MPPED1O15442 326 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 KRASP01116 189 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 CHRM2P08172 466 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 ASAH2BP0C7U1 165 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 SMIM10L1P0DMW3 83 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 VSIG10L2P0DP72 767 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 PTBP1P26599 531 aaKnown RBP eCLIP4.22□□□□□ -1.732e-7■■□□□ 14.3
UBR1-201ENST00000290650 CHATP28329 748 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 NKX2-1P43699 371 aaPredicted RBP4.22□□□□□ -1.73
UBR1-201ENST00000290650 NOVA1P51513 510 aaKnown RBP4.22□□□□□ -1.73
UBR1-201ENST00000290650 ZNF133P52736 654 aaPredicted RBP4.22□□□□□ -1.73
UBR1-201ENST00000290650 SOX8P57073 446 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 PEA15Q15121 130 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 TFAP2EQ6VUC0 442 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 ACOT7LQ6ZUV0 252 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 SVBPQ8N300 66 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 SLC43A2Q8N370 569 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 TMEM178AQ8NBL3 297 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 TERB2Q8NHR7 220 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 SNIP1Q8TAD8 396 aaKnown RBP4.22□□□□□ -1.73
UBR1-201ENST00000290650 TTC9Q92623 222 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 SMIM10Q96HG1 83 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 LINC00052Q96N35 136 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.22□□□□□ -1.732e-8■■■■■ 40.5
UBR1-201ENST00000290650 HIST1H1DP16402 221 aaKnown RBP4.22□□□□□ -1.73
UBR1-201ENST00000290650 GNG10P50151 68 aa4.22□□□□□ -1.73
UBR1-201ENST00000290650 RAB11AP62491 216 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms