RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 C14orf144Q96I85 54 aa9.13□□□□□ -0.95
SKA1-201ENST00000285116 SERINC1Q9NRX5 453 aa9.13□□□□□ -0.95
SKA1-201ENST00000285116 GFOD1Q9NXC2 390 aa9.13□□□□□ -0.95
SKA1-201ENST00000285116 GAR1Q9NY12 217 aaKnown RBP9.13□□□□□ -0.95
SKA1-201ENST00000285116 RP1P56715 2156 aa9.13□□□□□ -0.95
SKA1-201ENST00000285116 A0A1W2PPE2 198 aa9.13□□□□□ -0.95
SKA1-201ENST00000285116 K7EPK0 472 aa9.13□□□□□ -0.95
SKA1-201ENST00000285116 YIF1AO95070 293 aa9.13□□□□□ -0.95
SKA1-201ENST00000285116 LY86O95711 162 aa9.13□□□□□ -0.95
SKA1-201ENST00000285116 PGA4P0DJD7 388 aa9.13□□□□□ -0.95
SKA1-201ENST00000285116 PGA3P0DJD8 388 aa9.13□□□□□ -0.95
SKA1-201ENST00000285116 RPS2P15880 293 aaKnown RBP9.13□□□□□ -0.95
SKA1-201ENST00000285116 RPL12P30050 165 aaKnown RBP9.13□□□□□ -0.95
SKA1-201ENST00000285116 GNALP38405 381 aa9.13□□□□□ -0.95
SKA1-201ENST00000285116 NPY4RP50391 375 aa9.13□□□□□ -0.95
SKA1-201ENST00000285116 SUPT4H1P63272 117 aaKnown RBP9.13□□□□□ -0.95
SKA1-201ENST00000285116 POU3F1Q03052 451 aaPredicted RBP9.13□□□□□ -0.95
SKA1-201ENST00000285116 ZNF124Q15973 351 aa9.13□□□□□ -0.95
SKA1-201ENST00000285116 DOK3Q7L591 496 aa9.13□□□□□ -0.95
SKA1-201ENST00000285116 FAM71E2Q8N5Q1 922 aa9.13□□□□□ -0.95
SKA1-201ENST00000285116 RTBDNQ9BSG5 229 aaPredicted RBP9.13□□□□□ -0.95
SKA1-201ENST00000285116 SCRT1Q9BWW7 348 aa9.13□□□□□ -0.95
SKA1-201ENST00000285116 EIF5A2Q9GZV4 153 aaKnown RBP9.13□□□□□ -0.95
SKA1-201ENST00000285116 GSKIPQ9P0R6 139 aa9.13□□□□□ -0.95
SKA1-201ENST00000285116 ARGFXA6NJG6 315 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 VSTM2BA6NLU5 285 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 RRP8O43159 456 aaKnown RBP9.12□□□□□ -0.95
SKA1-201ENST00000285116 FKBP2P26885 142 aaKnown RBP9.12□□□□□ -0.95
SKA1-201ENST00000285116 CD38P28907 300 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 RBP2P50120 134 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 PPP1R3BQ86XI6 285 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 CPNE4Q96A23 557 aaPredicted RBP9.12□□□□□ -0.95
SKA1-201ENST00000285116 KCNJ16Q9NPI9 418 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 PNRC2Q9NPJ4 139 aaKnown RBP9.12□□□□□ -0.95
SKA1-201ENST00000285116 CENPMQ9NSP4 180 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 FBXL17Q9UF56 701 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 FER1L5A0AVI2 2057 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 IGHV1OR15-9A0A0B4J2B8 117 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 IFITM10A6NMD0 228 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 GMFGO60234 142 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 RNF224P0DH78 156 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 SLC2A1P11166 492 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 TMEM50BP56557 158 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 DNLZQ5SXM8 178 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 GLIPR1L1Q6UWM5 242 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 SLC16A14Q7RTX9 510 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 PLXDC1Q8IUK5 500 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 UBAC2Q8NBM4 344 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 OR13C9Q8NGT0 318 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 OR6X1Q8NH79 312 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 EMG1Q92979 244 aaKnown RBP9.12□□□□□ -0.95
SKA1-201ENST00000285116 YPEL4Q96NS1 127 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 URM1Q9BTM9 101 aaKnown RBP9.12□□□□□ -0.95
SKA1-201ENST00000285116 TM2D1Q9BX74 207 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 CNTNAP3Q9BZ76 1288 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 SLC35B3Q9H1N7 401 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 SDHAF3Q9NRP4 125 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 DECR2Q9NUI1 292 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 PRR13Q9NZ81 148 aa9.12□□□□□ -0.95
SKA1-201ENST00000285116 IGHV1OR21-1A0A087WYE8 117 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 A0A1B0GV90 55 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 OR2C1O95371 312 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 HIST1H1BP16401 226 aaKnown RBP9.11□□□□□ -0.95
SKA1-201ENST00000285116 ZNF708P17019 499 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 ZNF17P17021 662 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 FCGR2CP31995 323 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 THBS4P35443 961 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 BIDP55957 195 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 GRB2P62993 217 aaKnown RBP9.11□□□□□ -0.95
SKA1-201ENST00000285116 AADACL3Q5VUY0 350 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 OR2A2Q6IF42 318 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 COX15Q7KZN9 410 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 APCDD1LQ8NCL9 501 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 OR5H2Q8NGV7 314 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 CD300LFQ8TDQ1 290 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 C10orf35Q96D05 121 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 NICN1Q9BSH3 213 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 TMEM59Q9BXS4 323 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 PRDM13Q9H4Q3 707 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 LUZP4Q9P127 313 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 SUSD2Q9UGT4 822 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 AMDHD2Q9Y303 409 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 HDGFL3Q9Y3E1 203 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 METTL12A8MUP2 240 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 IGHG1P01857 330 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 DANCRP0C864 163 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 ZNF133P52736 654 aaPredicted RBP9.11□□□□□ -0.95
SKA1-201ENST00000285116 CD81P60033 236 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 HNRNPKP61978 463 aaKnown RBP eCLIP9.11□□□□□ -0.95
SKA1-201ENST00000285116 RPS23P62266 143 aaKnown RBP9.11□□□□□ -0.95
SKA1-201ENST00000285116 FOXF1Q12946 379 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 PLPPR5Q32ZL2 321 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 REC114Q7Z4M0 266 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 CADM4Q8NFZ8 388 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 OR8B12Q8NGG6 310 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 OR13G1Q8NGZ3 307 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 AKR7LQ8NHP1 331 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 OR51E1Q8TCB6 317 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 PBDC1Q9BVG4 233 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 MED29Q9NX70 200 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms