RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 FAM189A2Q15884 450 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 C1orf140Q5VVS0 124 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 TOMM20LQ6UXN7 152 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 LANCL3Q6ZV70 420 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 MYPOPQ86VE0 399 aaPredicted RBP14.42□□□□□ -0.1
GPC1-201ENST00000264039 MALSU1Q96EH3 234 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 SMIM7Q9BQ49 75 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 SAMD10Q9BYL1 202 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 ZNF160Q9HCG1 818 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 A0A1W2PNV4 684 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 RAD51DO75771 328 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 BPNT1O95861 308 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 CSF2RAP15509 400 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 ATP6V0CP27449 155 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 MTCP1P56278 107 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 RPP30P78346 268 aaKnown RBP14.42□□□□□ -0.1
GPC1-201ENST00000264039 NSDHLQ15738 373 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 PRR18Q8N4B5 295 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 C19orf47Q8N9M1 422 aaKnown RBP14.42□□□□□ -0.1
GPC1-201ENST00000264039 KIR3DX1Q9H7L2 352 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 ZNF318Q5VUA4 2279 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 TRPM7Q96QT4 1865 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 OR7C1O76099 320 aaPredicted RBP14.42□□□□□ -0.1
GPC1-201ENST00000264039 CTSBP07858 339 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 ERVFRD-1P60508 538 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 LSM6P62312 80 aaKnown RBP14.42□□□□□ -0.1
GPC1-201ENST00000264039 FZD2Q14332 565 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 RSPO4Q2I0M5 234 aaPredicted RBP14.42□□□□□ -0.1
GPC1-201ENST00000264039 DMRTA1Q5VZB9 504 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 NPSR1Q6W5P4 371 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 DYRK2Q92630 601 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 NTNG2Q96CW9 530 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 RBMXL1Q96E39 390 aaKnown RBP14.42□□□□□ -0.1
GPC1-201ENST00000264039 TMEM68Q96MH6 324 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 RNF122Q9H9V4 155 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 KLRF1Q9NZS2 232 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 PLXNA4Q9HCM2 1894 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 IL2RAP01589 272 aa14.41□□□□□ -0.1
GPC1-201ENST00000264039 CST2P09228 141 aa14.41□□□□□ -0.1
GPC1-201ENST00000264039 TBPP20226 339 aa14.41□□□□□ -0.1
GPC1-201ENST00000264039 CCNOP22674 350 aa14.41□□□□□ -0.1
GPC1-201ENST00000264039 INSM1Q01101 510 aaPredicted RBP14.41□□□□□ -0.1
GPC1-201ENST00000264039 TMEM41BQ5BJD5 291 aa14.41□□□□□ -0.1
GPC1-201ENST00000264039 HEPN1Q6WQI6 88 aa14.41□□□□□ -0.1
GPC1-201ENST00000264039 AQP3Q92482 292 aa14.41□□□□□ -0.1
GPC1-201ENST00000264039 TMEM18Q96B42 140 aa14.41□□□□□ -0.1
GPC1-201ENST00000264039 SOX7Q9BT81 388 aa14.41□□□□□ -0.1
GPC1-201ENST00000264039 HS3ST3B1Q9Y662 390 aa14.41□□□□□ -0.1
GPC1-201ENST00000264039 CBY3A6NI87 242 aa14.41□□□□□ -0.1
GPC1-201ENST00000264039 HNF1AP20823 631 aa14.41□□□□□ -0.1
GPC1-201ENST00000264039 DUSP1P28562 367 aa14.41□□□□□ -0.1
GPC1-201ENST00000264039 GABRA4P48169 554 aa14.41□□□□□ -0.1
GPC1-201ENST00000264039 TMEM52BQ4KMG9 183 aa14.41□□□□□ -0.1
GPC1-201ENST00000264039 RNF144BQ7Z419 303 aa14.41□□□□□ -0.1
GPC1-201ENST00000264039 FAAP24Q9BTP7 215 aa14.41□□□□□ -0.1
GPC1-201ENST00000264039 FUT9Q9Y231 359 aa14.41□□□□□ -0.1
GPC1-201ENST00000264039 AQP7O14520 342 aa14.41□□□□□ -0.1
GPC1-201ENST00000264039 HCRTR1O43613 425 aa14.41□□□□□ -0.1
GPC1-201ENST00000264039 PTGER4P35408 488 aa14.41□□□□□ -0.1
GPC1-201ENST00000264039 CATSPERDQ86XM0 798 aa14.41□□□□□ -0.1
GPC1-201ENST00000264039 TDRD6O60522 2096 aaKnown RBP14.4□□□□□ -0.1
GPC1-201ENST00000264039 FAHP16930 419 aa14.4□□□□□ -0.1
GPC1-201ENST00000264039 FAM3AP98173 230 aa14.4□□□□□ -0.1
GPC1-201ENST00000264039 UEVLDQ8IX04 471 aa14.4□□□□□ -0.1
GPC1-201ENST00000264039 SGCZQ96LD1 299 aa14.4□□□□□ -0.1
GPC1-201ENST00000264039 PLXNB2O15031 1838 aa14.4□□□□□ -0.1
GPC1-201ENST00000264039 TCF20Q9UGU0 1960 aaKnown RBP14.4□□□□□ -0.1
GPC1-201ENST00000264039 IGKV1D-42A0A075B6H8 117 aa14.4□□□□□ -0.1
GPC1-201ENST00000264039 LOC102724200A0A096LPH7 203 aaPredicted RBP14.4□□□□□ -0.1
GPC1-201ENST00000264039 CDC14BO60729 498 aa14.4□□□□□ -0.1
GPC1-201ENST00000264039 GSTP1P09211 210 aaKnown RBP14.4□□□□□ -0.1
GPC1-201ENST00000264039 NOVA1P51513 510 aaKnown RBP14.4□□□□□ -0.1
GPC1-201ENST00000264039 CARD18P57730 90 aa14.4□□□□□ -0.1
GPC1-201ENST00000264039 CLN3Q13286 438 aa14.4□□□□□ -0.1
GPC1-201ENST00000264039 PCK2Q16822 640 aa14.4□□□□□ -0.1
GPC1-201ENST00000264039 PNLIPRP3Q17RR3 467 aa14.4□□□□□ -0.1
GPC1-201ENST00000264039 C16orf47Q6ZP98 133 aaPredicted RBP14.4□□□□□ -0.1
GPC1-201ENST00000264039 TMEM230Q96A57 120 aa14.4□□□□□ -0.1
GPC1-201ENST00000264039 OR5B2Q96R09 309 aa14.4□□□□□ -0.1
GPC1-201ENST00000264039 TUBA4BQ9H853 241 aa14.4□□□□□ -0.1
GPC1-201ENST00000264039 DKKL1Q9UK85 242 aa14.4□□□□□ -0.1
GPC1-201ENST00000264039 PAM16Q9Y3D7 125 aa14.4□□□□□ -0.1
GPC1-201ENST00000264039 OTOL1A6NHN0 477 aaPredicted RBP14.4□□□□□ -0.1
GPC1-201ENST00000264039 FIGNL2A6NMB9 653 aa14.4□□□□□ -0.1
GPC1-201ENST00000264039 LILRB3O75022 631 aa14.4□□□□□ -0.1
GPC1-201ENST00000264039 DBHP09172 617 aa14.4□□□□□ -0.1
GPC1-201ENST00000264039 RPS16P62249 146 aaKnown RBP14.4□□□□□ -0.1
GPC1-201ENST00000264039 POC1AQ8NBT0 407 aa14.4□□□□□ -0.1
GPC1-201ENST00000264039 COX14Q96I36 57 aa14.4□□□□□ -0.1
GPC1-201ENST00000264039 ELOA3CA0A087WX78 387 aaPredicted RBP14.39□□□□□ -0.11
GPC1-201ENST00000264039 EREGO14944 169 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 ZNF77Q15935 545 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 ZNF776Q68DI1 518 aaPredicted RBP14.39□□□□□ -0.11
GPC1-201ENST00000264039 ZNF787Q6DD87 383 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 DMBX1Q8NFW5 382 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 C11orf40Q8WZ69 217 aa14.39□□□□□ -0.11
GPC1-201ENST00000264039 SCARF2Q96GP6 870 aaPredicted RBP14.39□□□□□ -0.11
GPC1-201ENST00000264039 FAM103A1Q9BTL3 118 aaKnown RBP14.39□□□□□ -0.11
GPC1-201ENST00000264039 RBM24Q9BX46 236 aaKnown RBP14.39□□□□□ -0.11
GPC1-201ENST00000264039 LMAN1LQ9HAT1 526 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms