RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 GUSBP11Q6P575 273 aa9.58□□□□□ -0.88
CD44-201ENST00000263398 OR4D9Q8NGE8 314 aa9.58□□□□□ -0.88
CD44-201ENST00000263398 NUBPLQ8TB37 319 aa9.58□□□□□ -0.88
CD44-201ENST00000263398 ZNF230Q9UIE0 474 aaPredicted RBP9.58□□□□□ -0.88
CD44-201ENST00000263398 V9GYS6 101 aa9.58□□□□□ -0.88
CD44-201ENST00000263398 A0A1W2PQD3 144 aa9.58□□□□□ -0.88
CD44-201ENST00000263398 TO15178 435 aa9.58□□□□□ -0.88
CD44-201ENST00000263398 RAB13P51153 203 aa9.58□□□□□ -0.88
CD44-201ENST00000263398 RHBDD2Q6NTF9 364 aa9.58□□□□□ -0.88
CD44-201ENST00000263398 C6orf201Q7Z4U5 140 aa9.58□□□□□ -0.88
CD44-201ENST00000263398 OR11G2Q8NGC1 345 aa9.58□□□□□ -0.88
CD44-201ENST00000263398 OR10X1Q8NGY0 326 aa9.58□□□□□ -0.88
CD44-201ENST00000263398 OR5B3Q8NH48 314 aa9.58□□□□□ -0.88
CD44-201ENST00000263398 TMEM18Q96B42 140 aa9.58□□□□□ -0.88
CD44-201ENST00000263398 TIMD4Q96H15 378 aa9.58□□□□□ -0.88
CD44-201ENST00000263398 TMEM30CPA0ZSE6 113 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 G3V3Q6 166 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 TNFSF14O43557 240 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 CDC14BO60729 498 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 OR5G3P0C626 314 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 SDHBP21912 280 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 UBE2G2P60604 165 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 FZD5Q13467 585 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 HSD17B13Q7Z5P4 300 aaPredicted RBP9.57□□□□□ -0.88
CD44-201ENST00000263398 OR6X1Q8NH79 312 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 FAAP24Q9BTP7 215 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 P4HTMQ9NXG6 502 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 WSB1Q9Y6I7 421 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 SVILO95425 2214 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 H3BMH7 237 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 MPZL1O95297 269 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 SLC25A6P12236 298 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 DVL1P1P54792 670 aaPredicted RBP9.57□□□□□ -0.88
CD44-201ENST00000263398 NXPH1P58417 271 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 ZNF79Q15937 498 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 C4orf17Q53FE4 359 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 C16orf47Q6ZP98 133 aaPredicted RBP9.57□□□□□ -0.88
CD44-201ENST00000263398 TRILQ7L0X0 811 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 CLDN23Q96B33 292 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 MRPS24Q96EL2 167 aaKnown RBP9.57□□□□□ -0.88
CD44-201ENST00000263398 TAAR9Q96RI9 348 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 RAB40CQ96S21 281 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 CTDSP1Q9GZU7 261 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 NXF2Q9GZY0 626 aaKnown RBP9.57□□□□□ -0.88
CD44-201ENST00000263398 GAR1Q9NY12 217 aaKnown RBP9.57□□□□□ -0.88
CD44-201ENST00000263398 FRRS1LQ9P0K9 344 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 CCDC187A0A096LP49 1063 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 IGHV1OR15-9A0A0B4J2B8 117 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 CYR61O00622 381 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 KRASP01116 189 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 SEMG1P04279 462 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 CELA2BP08218 269 aaPredicted RBP9.57□□□□□ -0.88
CD44-201ENST00000263398 MESTQ5EB52 335 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 SPATA46Q5T0L3 261 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 ZNF774Q6NX45 483 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 ZFP64Q9NPA5 681 aa9.57□□□□□ -0.88
CD44-201ENST00000263398 CXCL3P19876 107 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 GALNSP34059 522 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 OR3A4PP47883 348 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 LIMK1P53667 647 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 LSM11P83369 360 aaKnown RBP eCLIP9.56□□□□□ -0.88
CD44-201ENST00000263398 ETFDHQ16134 617 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 C1QL3Q5VWW1 255 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 OR2T2Q6IF00 324 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 TMEM91Q6ZNR0 172 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 NAA60Q9H7X0 242 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 ZNF586Q9NXT0 402 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 PCOLCE2Q9UKZ9 415 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 ATP23Q9Y6H3 246 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 UNC13CQ8NB66 2214 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 TRGV5A0A0B4J1U4 118 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 RRP8O43159 456 aaKnown RBP9.56□□□□□ -0.88
CD44-201ENST00000263398 FGF7P21781 194 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 CSN1S1P47710 185 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 FABP9Q0Z7S8 132 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 SURF2Q15527 256 aaPredicted RBP9.56□□□□□ -0.88
CD44-201ENST00000263398 GGNBP1Q5YKI7 109 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 SFTPA1Q8IWL2 248 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 C20orf196Q8IYI0 205 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 GVQW1Q8N7I0 195 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 KISS1RQ969F8 398 aaPredicted RBP9.56□□□□□ -0.88
CD44-201ENST00000263398 ZNF251Q9BRH9 671 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 ERRFI1Q9UJM3 462 aaPredicted RBP9.56□□□□□ -0.88
CD44-201ENST00000263398 FOCADQ5VW36 1801 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 CACNA1IQ9P0X4 2223 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 GABRA1P14867 456 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 AKR1C3P42330 323 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 SELENOPP49908 381 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 IL13RA2Q14627 380 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 PDCD1Q15116 288 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 RNPS1Q15287 305 aaKnown RBP9.56□□□□□ -0.88
CD44-201ENST00000263398 OR1C1Q15619 314 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 PABPC1L2AQ5JQF8 200 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 ACER2Q5QJU3 275 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 RGS7BPQ6MZT1 257 aaPredicted RBP9.56□□□□□ -0.88
CD44-201ENST00000263398 ZAR1Q86SH2 424 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 MRGPREQ86SM8 312 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 GPA33Q99795 319 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 EDEM2Q9BV94 578 aa9.56□□□□□ -0.88
CD44-201ENST00000263398 OCIAD1Q9NX40 245 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms