RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 MRPL21Q7Z2W9 205 aaKnown RBP23.58■■□□□ 1.37
SMARCD3-201ENST00000262188 MS4A15Q8N5U1 240 aa23.58■■□□□ 1.37
SMARCD3-201ENST00000262188 OR14K1Q8NGZ2 314 aa23.58■■□□□ 1.37
SMARCD3-201ENST00000262188 SPSB4Q96A44 273 aa23.58■■□□□ 1.37
SMARCD3-201ENST00000262188 CMBLQ96DG6 245 aa23.58■■□□□ 1.37
SMARCD3-201ENST00000262188 ADAT3Q96EY9 351 aaPredicted RBP23.58■■□□□ 1.37
SMARCD3-201ENST00000262188 MARS2Q96GW9 593 aaKnown RBP23.58■■□□□ 1.37
SMARCD3-201ENST00000262188 MED28Q9H204 178 aa23.58■■□□□ 1.37
SMARCD3-201ENST00000262188 COPZ2Q9P299 210 aa23.58■■□□□ 1.37
SMARCD3-201ENST00000262188 DHDHQ9UQ10 334 aa23.58■■□□□ 1.37
SMARCD3-201ENST00000262188 PLCE1Q9P212 2302 aa23.58■■□□□ 1.36
SMARCD3-201ENST00000262188 TRAV20A0A0B4J274 112 aa23.58■■□□□ 1.36
SMARCD3-201ENST00000262188 SHISA9B4DS77 424 aa23.58■■□□□ 1.36
SMARCD3-201ENST00000262188 DNASE2O00115 360 aaPredicted RBP23.58■■□□□ 1.36
SMARCD3-201ENST00000262188 LYRM1O43325 122 aa23.58■■□□□ 1.36
SMARCD3-201ENST00000262188 SC5DO75845 299 aa23.58■■□□□ 1.36
SMARCD3-201ENST00000262188 FAHP16930 419 aa23.58■■□□□ 1.36
SMARCD3-201ENST00000262188 CCL1P22362 96 aa23.58■■□□□ 1.36
SMARCD3-201ENST00000262188 GSK3AP49840 483 aa23.58■■□□□ 1.36
SMARCD3-201ENST00000262188 RELQ04864 619 aaPredicted RBP23.58■■□□□ 1.36
SMARCD3-201ENST00000262188 OR2T2Q6IF00 324 aa23.58■■□□□ 1.36
SMARCD3-201ENST00000262188 CD200R1LQ6Q8B3 271 aa23.58■■□□□ 1.36
SMARCD3-201ENST00000262188 PGAP1Q75T13 922 aa23.58■■□□□ 1.36
SMARCD3-201ENST00000262188 LRP11Q86VZ4 500 aa23.58■■□□□ 1.36
SMARCD3-201ENST00000262188 TMEM106AQ96A25 262 aa23.58■■□□□ 1.36
SMARCD3-201ENST00000262188 FGGYQ96C11 551 aa23.58■■□□□ 1.36
SMARCD3-201ENST00000262188 GAL3ST1Q99999 423 aa23.58■■□□□ 1.36
SMARCD3-201ENST00000262188 REPIN1Q9BWE0 567 aaKnown RBP23.58■■□□□ 1.36
SMARCD3-201ENST00000262188 TXNL4BQ9NX01 149 aaKnown RBP23.58■■□□□ 1.36
SMARCD3-201ENST00000262188 PURGQ9UJV8 347 aaKnown RBP23.58■■□□□ 1.36
SMARCD3-201ENST00000262188 ATP23Q9Y6H3 246 aa23.58■■□□□ 1.36
SMARCD3-201ENST00000262188 ZNF879B4DU55 563 aa23.57■■□□□ 1.36
SMARCD3-201ENST00000262188 HLA-DPB1P04440 258 aa23.57■■□□□ 1.36
SMARCD3-201ENST00000262188 THBS4P35443 961 aa23.57■■□□□ 1.36
SMARCD3-201ENST00000262188 FGL1Q08830 312 aa23.57■■□□□ 1.36
SMARCD3-201ENST00000262188 Q499Y3 187 aa23.57■■□□□ 1.36
SMARCD3-201ENST00000262188 PYDC2Q56P42 97 aa23.57■■□□□ 1.36
SMARCD3-201ENST00000262188 BEX5Q5H9J7 111 aa23.57■■□□□ 1.36
SMARCD3-201ENST00000262188 DDI2Q5TDH0 399 aa23.57■■□□□ 1.36
SMARCD3-201ENST00000262188 ASPHD2Q6ICH7 369 aa23.57■■□□□ 1.36
SMARCD3-201ENST00000262188 DOK3Q7L591 496 aa23.57■■□□□ 1.36
SMARCD3-201ENST00000262188 STX12Q86Y82 276 aa23.57■■□□□ 1.36
SMARCD3-201ENST00000262188 OR5AS1Q8N127 324 aa23.57■■□□□ 1.36
SMARCD3-201ENST00000262188 KLF14Q8TD94 323 aaPredicted RBP23.57■■□□□ 1.36
SMARCD3-201ENST00000262188 BARHL1Q9BZE3 327 aa23.57■■□□□ 1.36
SMARCD3-201ENST00000262188 NOX4Q9NPH5 578 aa23.57■■□□□ 1.36
SMARCD3-201ENST00000262188 PFDN2Q9UHV9 154 aa23.57■■□□□ 1.36
SMARCD3-201ENST00000262188 IL1AP01583 271 aa23.56■■□□□ 1.36
SMARCD3-201ENST00000262188 CD53P19397 219 aa23.56■■□□□ 1.36
SMARCD3-201ENST00000262188 PLPP7Q8NBV4 271 aa23.56■■□□□ 1.36
SMARCD3-201ENST00000262188 OR5L1Q8NGL2 311 aa23.56■■□□□ 1.36
SMARCD3-201ENST00000262188 DERL3Q96Q80 235 aa23.56■■□□□ 1.36
SMARCD3-201ENST00000262188 ZNF251Q9BRH9 671 aa23.56■■□□□ 1.36
SMARCD3-201ENST00000262188 BCL2L14Q9BZR8 327 aa23.56■■□□□ 1.36
SMARCD3-201ENST00000262188 ABCA4P78363 2273 aa23.56■■□□□ 1.36
SMARCD3-201ENST00000262188 ICE1Q9Y2F5 2266 aa23.56■■□□□ 1.36
SMARCD3-201ENST00000262188 HRNRQ86YZ3 2850 aaPredicted RBP23.56■■□□□ 1.36
SMARCD3-201ENST00000262188 C7orf66A4D0T2 115 aa23.56■■□□□ 1.36
SMARCD3-201ENST00000262188 DHRS3O75911 302 aa23.56■■□□□ 1.36
SMARCD3-201ENST00000262188 CD3EP07766 207 aa23.56■■□□□ 1.36
SMARCD3-201ENST00000262188 FGF2P09038 288 aa23.56■■□□□ 1.36
SMARCD3-201ENST00000262188 RPS19P39019 145 aaKnown RBP23.56■■□□□ 1.36
SMARCD3-201ENST00000262188 OR56B2PQ8NGI1 322 aa23.56■■□□□ 1.36
SMARCD3-201ENST00000262188 TMEM171Q8WVE6 324 aa23.56■■□□□ 1.36
SMARCD3-201ENST00000262188 UPRTQ96BW1 309 aa23.56■■□□□ 1.36
SMARCD3-201ENST00000262188 SSR3Q9UNL2 185 aa23.56■■□□□ 1.36
SMARCD3-201ENST00000262188 PIGLQ9Y2B2 252 aa23.56■■□□□ 1.36
SMARCD3-201ENST00000262188 TRDV1A0A1B0GX56 115 aa23.55■■□□□ 1.36
SMARCD3-201ENST00000262188 SHISA3A0PJX4 238 aa23.55■■□□□ 1.36
SMARCD3-201ENST00000262188 ZNF124Q15973 351 aa23.55■■□□□ 1.36
SMARCD3-201ENST00000262188 NHLRC3Q5JS37 347 aa23.55■■□□□ 1.36
SMARCD3-201ENST00000262188 HES5Q5TA89 166 aa23.55■■□□□ 1.36
SMARCD3-201ENST00000262188 RGS7BPQ6MZT1 257 aaPredicted RBP23.55■■□□□ 1.36
SMARCD3-201ENST00000262188 AP3S1Q92572 193 aa23.55■■□□□ 1.36
SMARCD3-201ENST00000262188 ZNF275Q9NSD4 429 aaPredicted RBP23.55■■□□□ 1.36
SMARCD3-201ENST00000262188 MYEF2Q9P2K5 600 aaKnown RBP23.55■■□□□ 1.36
SMARCD3-201ENST00000262188 V9GYS6 101 aa23.55■■□□□ 1.36
SMARCD3-201ENST00000262188 PSG7Q13046 419 aa23.54■■□□□ 1.36
SMARCD3-201ENST00000262188 UNQ9370/PRO34162Q6UXP9 181 aa23.54■■□□□ 1.36
SMARCD3-201ENST00000262188 UXS1Q8NBZ7 420 aa23.54■■□□□ 1.36
SMARCD3-201ENST00000262188 RGCCQ9H4X1 137 aa23.54■■□□□ 1.36
SMARCD3-201ENST00000262188 CA10Q9NS85 328 aa23.54■■□□□ 1.36
SMARCD3-201ENST00000262188 DCHS2Q6V1P9 2916 aa23.54■■□□□ 1.36
SMARCD3-201ENST00000262188 SMIM30A4D0T7 59 aa23.54■■□□□ 1.36
SMARCD3-201ENST00000262188 GGT3PA6NGU5 568 aa23.54■■□□□ 1.36
SMARCD3-201ENST00000262188 WRBO00258 174 aa23.54■■□□□ 1.36
SMARCD3-201ENST00000262188 MPC2O95563 127 aa23.54■■□□□ 1.36
SMARCD3-201ENST00000262188 DIRAS2Q96HU8 199 aa23.54■■□□□ 1.36
SMARCD3-201ENST00000262188 SYT3Q9BQG1 590 aa23.54■■□□□ 1.36
SMARCD3-201ENST00000262188 DUSP13Q9UII6 198 aa23.54■■□□□ 1.36
SMARCD3-201ENST00000262188 RNF115Q9Y4L5 304 aa23.54■■□□□ 1.36
SMARCD3-201ENST00000262188 TRAV8-7A0A075B6U6 113 aa23.53■■□□□ 1.36
SMARCD3-201ENST00000262188 DHFRP00374 187 aa23.53■■□□□ 1.36
SMARCD3-201ENST00000262188 SLC2A2P11168 524 aaPredicted RBP23.53■■□□□ 1.36
SMARCD3-201ENST00000262188 COL8A1P27658 744 aa23.53■■□□□ 1.36
SMARCD3-201ENST00000262188 FBXW12Q6X9E4 464 aa23.53■■□□□ 1.36
SMARCD3-201ENST00000262188 SEMA6DQ8NFY4 1073 aa23.53■■□□□ 1.36
SMARCD3-201ENST00000262188 FAM222BQ8WU58 562 aa23.53■■□□□ 1.36
SMARCD3-201ENST00000262188 DVL3Q92997 716 aaPredicted RBP23.53■■□□□ 1.36
SMARCD3-201ENST00000262188 SLC25A46Q96AG3 418 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms