RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 OR8U1Q8NH10 309 aa12.28□□□□□ -0.44
CDH1-201ENST00000261769 RTN4IP1Q8WWV3 396 aaPredicted RBP12.28□□□□□ -0.44
CDH1-201ENST00000261769 GPR31O00270 319 aa12.28□□□□□ -0.44
CDH1-201ENST00000261769 APOC3P02656 99 aa12.28□□□□□ -0.44
CDH1-201ENST00000261769 HRH1P35367 487 aa12.28□□□□□ -0.44
CDH1-201ENST00000261769 FOXO1Q12778 655 aa12.28□□□□□ -0.44
CDH1-201ENST00000261769 TMEM268Q5VZI3 342 aa12.28□□□□□ -0.44
CDH1-201ENST00000261769 SMIM15Q7Z3B0 74 aa12.28□□□□□ -0.44
CDH1-201ENST00000261769 CCDC71Q8IV32 467 aaPredicted RBP12.28□□□□□ -0.44
CDH1-201ENST00000261769 FYTTD1Q96QD9 318 aaKnown RBP12.28□□□□□ -0.44
CDH1-201ENST00000261769 RNF167Q9H6Y7 350 aa12.28□□□□□ -0.44
CDH1-201ENST00000261769 CACNA1HO95180 2353 aa12.28□□□□□ -0.44
CDH1-201ENST00000261769 CRYM-AS1A6NIL9 109 aa12.28□□□□□ -0.44
CDH1-201ENST00000261769 J3QT63 122 aa12.28□□□□□ -0.44
CDH1-201ENST00000261769 DXOO77932 396 aaKnown RBP12.28□□□□□ -0.44
CDH1-201ENST00000261769 GLI4P10075 376 aa12.28□□□□□ -0.44
CDH1-201ENST00000261769 COX7A1P24310 79 aa12.28□□□□□ -0.44
CDH1-201ENST00000261769 PLA1AQ53H76 456 aa12.28□□□□□ -0.44
CDH1-201ENST00000261769 FAM27D1Q5T7N8 215 aa12.28□□□□□ -0.44
CDH1-201ENST00000261769 MOGAT3Q86VF5 341 aa12.28□□□□□ -0.44
CDH1-201ENST00000261769 LYG1Q8N1E2 194 aa12.28□□□□□ -0.44
CDH1-201ENST00000261769 POC1BQ8TC44 478 aa12.28□□□□□ -0.44
CDH1-201ENST00000261769 TMPRSS2O15393 492 aa12.27□□□□□ -0.44
CDH1-201ENST00000261769 BMI1P35226 326 aa12.27□□□□□ -0.44
CDH1-201ENST00000261769 SERPINF1P36955 418 aa12.27□□□□□ -0.44
CDH1-201ENST00000261769 SUN5Q8TC36 379 aa12.27□□□□□ -0.44
CDH1-201ENST00000261769 RNF24Q9Y225 148 aa12.27□□□□□ -0.44
CDH1-201ENST00000261769 PRSS44E7EML9 344 aa12.27□□□□□ -0.44
CDH1-201ENST00000261769 FFAR1O14842 300 aa12.27□□□□□ -0.44
CDH1-201ENST00000261769 AGPAT2O15120 278 aa12.27□□□□□ -0.44
CDH1-201ENST00000261769 AKR7A2O43488 359 aa12.27□□□□□ -0.44
CDH1-201ENST00000261769 CYTIPO60759 359 aa12.27□□□□□ -0.44
CDH1-201ENST00000261769 STUMQ69YW2 141 aa12.27□□□□□ -0.44
CDH1-201ENST00000261769 OPN3Q9H1Y3 402 aaPredicted RBP12.27□□□□□ -0.44
CDH1-201ENST00000261769 HES4Q9HCC6 221 aa12.27□□□□□ -0.44
CDH1-201ENST00000261769 LIPGQ9Y5X9 500 aa12.27□□□□□ -0.44
CDH1-201ENST00000261769 MIA3Q5JRA6 1907 aa12.27□□□□□ -0.45
CDH1-201ENST00000261769 TMEM210A6NLX4 147 aa12.27□□□□□ -0.45
CDH1-201ENST00000261769 PRF1P14222 555 aa12.27□□□□□ -0.45
CDH1-201ENST00000261769 RAB6AP20340 208 aa12.27□□□□□ -0.45
CDH1-201ENST00000261769 RFESDQ8TAC1 157 aa12.27□□□□□ -0.45
CDH1-201ENST00000261769 NINQ8N4C6 2090 aa12.27□□□□□ -0.45
CDH1-201ENST00000261769 COL19A1Q14993 1142 aa12.27□□□□□ -0.45
CDH1-201ENST00000261769 SLC38A6Q8IZM9 456 aa12.27□□□□□ -0.45
CDH1-201ENST00000261769 RNF133Q8WVZ7 376 aa12.27□□□□□ -0.45
CDH1-201ENST00000261769 CTHRC1Q96CG8 243 aa12.27□□□□□ -0.45
CDH1-201ENST00000261769 POM121L2Q96KW2 1035 aa12.27□□□□□ -0.45
CDH1-201ENST00000261769 CLN8Q9UBY8 286 aa12.27□□□□□ -0.45
CDH1-201ENST00000261769 GPR179Q6PRD1 2367 aa12.27□□□□□ -0.45
CDH1-201ENST00000261769 SMIM18P0DKX4 95 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 MUC20Q8N307 709 aaPredicted RBP12.26□□□□□ -0.45
CDH1-201ENST00000261769 OR10P1Q8NGE3 313 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 OR5A2Q8NGI9 324 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 TMEM56Q96MV1 263 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 ARPC5LQ9BPX5 153 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 ZNF665Q9H7R5 613 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 SLC7A10Q9NS82 523 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 MRM2Q9UI43 246 aaKnown RBP12.26□□□□□ -0.45
CDH1-201ENST00000261769 UPK3AO75631 287 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 CD3DP04234 171 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 ARL16Q0P5N6 197 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 YIPF6Q96EC8 236 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 TIMM8BQ9Y5J9 83 aaPredicted RBP12.26□□□□□ -0.45
CDH1-201ENST00000261769 KIF13BQ9NQT8 1826 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 CD59P13987 128 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 PIGPP57054 158 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 TMEM230Q96A57 120 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 MALSU1Q96EH3 234 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 RPH3ALQ9UNE2 315 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 STRAPQ9Y3F4 350 aaKnown RBP12.26□□□□□ -0.45
CDH1-201ENST00000261769 A0A0B4J203 849 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 RPS10-NUDT3A0A1W2PQS6 291 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 F8W036 122 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 HIST1H1DP16402 221 aaKnown RBP12.26□□□□□ -0.45
CDH1-201ENST00000261769 CSN1S1P47710 185 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 SLC26A10Q8NG04 563 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 OR10AD1Q8NGE0 317 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 OR10V1Q8NGI7 309 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 TERB2Q8NHR7 220 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 SEC22CQ9BRL7 303 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 ARV1Q9H2C2 271 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 C1RLQ9NZP8 487 aa12.26□□□□□ -0.45
CDH1-201ENST00000261769 A0A0B4J2A0 478 aa12.25□□□□□ -0.45
CDH1-201ENST00000261769 THNSL2Q86YJ6 484 aa12.25□□□□□ -0.45
CDH1-201ENST00000261769 SUMF2Q8NBJ7 301 aa12.25□□□□□ -0.45
CDH1-201ENST00000261769 UBAC2Q8NBM4 344 aa12.25□□□□□ -0.45
CDH1-201ENST00000261769 ABHD17AQ96GS6 310 aa12.25□□□□□ -0.45
CDH1-201ENST00000261769 ADTRPQ96IZ2 230 aa12.25□□□□□ -0.45
CDH1-201ENST00000261769 RHNO1Q9BSD3 238 aa12.25□□□□□ -0.45
CDH1-201ENST00000261769 CNTNAP3Q9BZ76 1288 aa12.25□□□□□ -0.45
CDH1-201ENST00000261769 ADAM19Q9H013 955 aa12.25□□□□□ -0.45
CDH1-201ENST00000261769 AUNIPQ9H7T9 357 aa12.25□□□□□ -0.45
CDH1-201ENST00000261769 CA10Q9NS85 328 aa12.25□□□□□ -0.45
CDH1-201ENST00000261769 SHPKQ9UHJ6 478 aa12.25□□□□□ -0.45
CDH1-201ENST00000261769 IGKV3-11P04433 115 aa12.25□□□□□ -0.45
CDH1-201ENST00000261769 MMP16P51512 607 aa12.25□□□□□ -0.45
CDH1-201ENST00000261769 GABRA6Q16445 453 aa12.25□□□□□ -0.45
CDH1-201ENST00000261769 SPANXN5Q5MJ07 72 aa12.25□□□□□ -0.45
CDH1-201ENST00000261769 RIPPLY2Q5TAB7 128 aa12.25□□□□□ -0.45
CDH1-201ENST00000261769 RHOUQ7L0Q8 258 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms