RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 NSG1A0A0A6YYJ2 146 aa14.33□□□□□ -0.12
HOXD3-201ENST00000249440 FAM74A7A6NL05 159 aa14.33□□□□□ -0.12
HOXD3-201ENST00000249440 YKT6O15498 198 aa14.33□□□□□ -0.12
HOXD3-201ENST00000249440 ACTL6AO96019 429 aa14.33□□□□□ -0.12
HOXD3-201ENST00000249440 SFTPBP07988 381 aa14.33□□□□□ -0.12
HOXD3-201ENST00000249440 RAB35Q15286 201 aa14.33□□□□□ -0.12
HOXD3-201ENST00000249440 FAM74A3Q4VXF1 159 aa14.33□□□□□ -0.12
HOXD3-201ENST00000249440 EIF5AL1Q6IS14 154 aaKnown RBP14.33□□□□□ -0.12
HOXD3-201ENST00000249440 OR2Y1Q8NGV0 311 aa14.33□□□□□ -0.12
HOXD3-201ENST00000249440 ACKR4Q9NPB9 350 aa14.33□□□□□ -0.12
HOXD3-201ENST00000249440 OR2S2Q9NQN1 319 aa14.33□□□□□ -0.12
HOXD3-201ENST00000249440 MMP26Q9NRE1 261 aa14.33□□□□□ -0.12
HOXD3-201ENST00000249440 PCDHB16Q9NRJ7 776 aa14.33□□□□□ -0.12
HOXD3-201ENST00000249440 ZNF629Q9UEG4 869 aaPredicted RBP14.33□□□□□ -0.12
HOXD3-201ENST00000249440 TNRC6BQ9UPQ9 1833 aaKnown RBP14.32□□□□□ -0.12
HOXD3-201ENST00000249440 IGKV1D-8A0A087WSZ0 117 aa14.32□□□□□ -0.12
HOXD3-201ENST00000249440 CCDC163A0A0D9SF12 145 aa14.32□□□□□ -0.12
HOXD3-201ENST00000249440 ZNF705EA8MWA4 302 aaPredicted RBP14.32□□□□□ -0.12
HOXD3-201ENST00000249440 ABCD4O14678 606 aa14.32□□□□□ -0.12
HOXD3-201ENST00000249440 CRYGSP22914 178 aa14.32□□□□□ -0.12
HOXD3-201ENST00000249440 PTGER4P35408 488 aa14.32□□□□□ -0.12
HOXD3-201ENST00000249440 MLF1P58340 268 aa14.32□□□□□ -0.12
HOXD3-201ENST00000249440 RAC3P60763 192 aa14.32□□□□□ -0.12
HOXD3-201ENST00000249440 RSU1Q15404 277 aa14.32□□□□□ -0.12
HOXD3-201ENST00000249440 GPR137CQ8N3F9 429 aa14.32□□□□□ -0.12
HOXD3-201ENST00000249440 SRXN1Q9BYN0 137 aa14.32□□□□□ -0.12
HOXD3-201ENST00000249440 LPAR3Q9UBY5 353 aa14.32□□□□□ -0.12
HOXD3-201ENST00000249440 ANXA10Q9UJ72 324 aa14.32□□□□□ -0.12
HOXD3-201ENST00000249440 GPR179Q6PRD1 2367 aa14.32□□□□□ -0.12
HOXD3-201ENST00000249440 CTSDP07339 412 aaPredicted RBP14.32□□□□□ -0.12
HOXD3-201ENST00000249440 CHAF1BQ13112 559 aa14.32□□□□□ -0.12
HOXD3-201ENST00000249440 TRA2AQ13595 282 aaKnown RBP eCLIP14.32□□□□□ -0.12
HOXD3-201ENST00000249440 CNN3Q15417 329 aaKnown RBP14.32□□□□□ -0.12
HOXD3-201ENST00000249440 PABPC1L2AQ5JQF8 200 aa14.32□□□□□ -0.12
HOXD3-201ENST00000249440 IL34Q6ZMJ4 242 aa14.32□□□□□ -0.12
HOXD3-201ENST00000249440 OR2AE1Q8NHA4 323 aa14.32□□□□□ -0.12
HOXD3-201ENST00000249440 ZNF775Q96BV0 537 aaPredicted RBP14.32□□□□□ -0.12
HOXD3-201ENST00000249440 REEP6Q96HR9 211 aa14.32□□□□□ -0.12
HOXD3-201ENST00000249440 DECR2Q9NUI1 292 aa14.32□□□□□ -0.12
HOXD3-201ENST00000249440 PMS2P1A4D2B8 440 aa14.31□□□□□ -0.12
HOXD3-201ENST00000249440 SYNGR3O43761 229 aa14.31□□□□□ -0.12
HOXD3-201ENST00000249440 CFIP05156 583 aa14.31□□□□□ -0.12
HOXD3-201ENST00000249440 CCL4P13236 92 aa14.31□□□□□ -0.12
HOXD3-201ENST00000249440 ACKR3P25106 362 aa14.31□□□□□ -0.12
HOXD3-201ENST00000249440 RBM39Q14498 530 aaKnown RBP14.31□□□□□ -0.12
HOXD3-201ENST00000249440 RSPO4Q2I0M5 234 aaPredicted RBP14.31□□□□□ -0.12
HOXD3-201ENST00000249440 IAH1Q2TAA2 248 aaPredicted RBP14.31□□□□□ -0.12
HOXD3-201ENST00000249440 ADAMTS17Q8TE56 1095 aa14.31□□□□□ -0.12
HOXD3-201ENST00000249440 SAT2Q96F10 170 aaPredicted RBP14.31□□□□□ -0.12
HOXD3-201ENST00000249440 SGCZQ96LD1 299 aa14.31□□□□□ -0.12
HOXD3-201ENST00000249440 CNTNAP3BQ96NU0 1288 aa14.31□□□□□ -0.12
HOXD3-201ENST00000249440 CRLF2Q9HC73 371 aa14.31□□□□□ -0.12
HOXD3-201ENST00000249440 PURGQ9UJV8 347 aaKnown RBP14.31□□□□□ -0.12
HOXD3-201ENST00000249440 HSF4Q9ULV5 492 aa14.31□□□□□ -0.12
HOXD3-201ENST00000249440 FAM230AA0A1W2PPH8 454 aa14.31□□□□□ -0.12
HOXD3-201ENST00000249440 F8W036 122 aa14.31□□□□□ -0.12
HOXD3-201ENST00000249440 GPR31O00270 319 aa14.31□□□□□ -0.12
HOXD3-201ENST00000249440 CST2P09228 141 aa14.31□□□□□ -0.12
HOXD3-201ENST00000249440 BLOC1S1P78537 153 aa14.31□□□□□ -0.12
HOXD3-201ENST00000249440 SCRN3Q0VDG4 424 aa14.31□□□□□ -0.12
HOXD3-201ENST00000249440 PUSL1Q8N0Z8 303 aaKnown RBP14.31□□□□□ -0.12
HOXD3-201ENST00000249440 FNDC9Q8TBE3 224 aa14.31□□□□□ -0.12
HOXD3-201ENST00000249440 HDHD3Q9BSH5 251 aaPredicted RBP14.31□□□□□ -0.12
HOXD3-201ENST00000249440 CNTNAP3Q9BZ76 1288 aa14.31□□□□□ -0.12
HOXD3-201ENST00000249440 ANGPTL7O43827 346 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 IFNA21P01568 189 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 OR5H8P0DN80 308 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 ADCYAP1P18509 176 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 FOLR3P41439 243 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 RBP2P50120 134 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 PJVKQ0ZLH3 352 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 TAF9Q16594 264 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 C10orf91Q5T1B1 145 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 ZNF774Q6NX45 483 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 FOXRED2Q8IWF2 684 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 OR1F12Q8NHA8 337 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 KCNE4Q8WWG9 221 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 FAAP24Q9BTP7 215 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 TAF9BQ9HBM6 251 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 PADI1Q9ULC6 663 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 CRYM-AS1A6NIL9 109 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 M0R296 226 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 NTN3O00634 580 aaPredicted RBP14.3□□□□□ -0.12
HOXD3-201ENST00000249440 SPRY1O43609 319 aaPredicted RBP14.3□□□□□ -0.12
HOXD3-201ENST00000249440 LCATP04180 440 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 HKR1P10072 659 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 SRD5A2P31213 254 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 CARD18P57730 90 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 SMCO1Q147U7 214 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 TMEM200AQ86VY9 491 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 CPT1CQ8TCG5 803 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 BORCS8Q96FH0 119 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 TMEM38BQ9NVV0 291 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 NECAP2Q9NVZ3 263 aa14.3□□□□□ -0.12
HOXD3-201ENST00000249440 ARID1AO14497 2285 aa14.29□□□□□ -0.12
HOXD3-201ENST00000249440 TDGF1P13385 188 aa14.29□□□□□ -0.12
HOXD3-201ENST00000249440 HOXA6P31267 233 aa14.29□□□□□ -0.12
HOXD3-201ENST00000249440 DUSP3P51452 185 aaPredicted RBP14.29□□□□□ -0.12
HOXD3-201ENST00000249440 ZFP36L1Q07352 338 aaKnown RBP14.29□□□□□ -0.12
HOXD3-201ENST00000249440 ZNF468Q5VIY5 522 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms