RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 HOXA6P31267 233 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 SLC25A1P53007 311 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 LY6G6FQ5SQ64 297 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 CATSPERDQ86XM0 798 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 NAA60Q9H7X0 242 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 BARX1Q9HBU1 254 aaPredicted RBP11.5□□□□□ -0.57
VAMP4-201ENST00000236192 ADAMTSL3P82987 1691 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 ARFGEF1Q9Y6D6 1849 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 CTSDP07339 412 aaPredicted RBP11.5□□□□□ -0.57
VAMP4-201ENST00000236192 FCGR3AP08637 254 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 UBE2V1Q13404 147 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 ELAVL3Q14576 367 aaKnown RBP11.5□□□□□ -0.57
VAMP4-201ENST00000236192 THSD4Q6ZMP0 1018 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 GPR84Q9NQS5 396 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 CDC42EP3Q9UKI2 254 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 YTHDF2Q9Y5A9 579 aaKnown RBP11.5□□□□□ -0.57
VAMP4-201ENST00000236192 MARF1Q9Y4F3 1742 aaKnown RBP11.5□□□□□ -0.57
VAMP4-201ENST00000236192 OTX2P32243 289 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 GALNSP34059 522 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 RIPPLY3P57055 190 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 SP6Q3SY56 376 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 WDR25Q64LD2 544 aaPredicted RBP11.5□□□□□ -0.57
VAMP4-201ENST00000236192 INSM2Q96T92 566 aaPredicted RBP11.5□□□□□ -0.57
VAMP4-201ENST00000236192 P2RX4Q99571 388 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 LPAR5Q9H1C0 372 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 FKRPQ9H9S5 495 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 ALS2Q96Q42 1657 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 GYPAP02724 150 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 DYNLT3P51808 116 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 LSM11P83369 360 aaKnown RBP eCLIP11.49□□□□□ -0.57
VAMP4-201ENST00000236192 NHLH1Q02575 133 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 CARD17Q5XLA6 110 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 OR4X1Q8NH49 305 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 MESP1Q9BRJ9 268 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 TMEM191AQ9H0A3 160 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 ZNF346Q9UL40 294 aaKnown RBP11.49□□□□□ -0.57
VAMP4-201ENST00000236192 DICER1Q9UPY3 1922 aaKnown RBP11.49□□□□□ -0.57
VAMP4-201ENST00000236192 M0R2Z0 102 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 SEMA4FO95754 770 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 GZMBP10144 247 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 MPZP25189 248 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 AADACL3Q5VUY0 350 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 FAM57BQ71RH2 274 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 TSEN54Q7Z6J9 526 aaKnown RBP11.49□□□□□ -0.57
VAMP4-201ENST00000236192 SLAMF6Q96DU3 332 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 PSENENQ9NZ42 101 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 FRRS1LQ9P0K9 344 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 PEF1Q9UBV8 284 aaKnown RBP11.49□□□□□ -0.57
VAMP4-201ENST00000236192 PITX3O75364 302 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 RNASEKQ6P5S7 137 aaKnown RBP11.49□□□□□ -0.57
VAMP4-201ENST00000236192 MARCH3Q86UD3 253 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 TGIF2LYQ8IUE0 185 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 OR1L6Q8NGR2 347 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 PRDM13Q9H4Q3 707 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 SEMA5BQ9P283 1151 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 SRPK3Q9UPE1 567 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 TRAV8-7A0A075B6U6 113 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 HYAL3O43820 417 aaPredicted RBP11.49□□□□□ -0.57
VAMP4-201ENST00000236192 OR4A8P0C604 315 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 LINC00346Q8IVM7 164 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 OR8G5Q8NG78 346 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 NANOS1Q8WY41 292 aaKnown RBP11.49□□□□□ -0.57
VAMP4-201ENST00000236192 CHRDL1Q9BU40 450 aa11.49□□□□□ -0.57
VAMP4-201ENST00000236192 OR2W5A6NFC9 320 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 SERINC4A6NH21 518 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 CBR3O75828 277 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 HOGA1Q86XE5 327 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 PARLQ9H300 379 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 CISD1Q9NZ45 108 aaKnown RBP11.48□□□□□ -0.57
VAMP4-201ENST00000236192 GPR34Q9UPC5 381 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 NEUROG3Q9Y4Z2 214 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 LY75O60449 1722 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 RHBDL1O75783 438 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 DBHP09172 617 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 RAC2P15153 192 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 CDKN1BP46527 198 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 ZNF506Q5JVG8 444 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 UNQ9370/PRO34162Q6UXP9 181 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 ERN2Q76MJ5 926 aaKnown RBP11.48□□□□□ -0.57
VAMP4-201ENST00000236192 MRPL24Q96A35 216 aaKnown RBP11.48□□□□□ -0.57
VAMP4-201ENST00000236192 SLC2A8Q9NY64 477 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 HDGFL3Q9Y3E1 203 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 KCNE3Q9Y6H6 103 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 COL24A1Q17RW2 1714 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 TRAV39A0A0B4J263 110 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 LDB3O75112 727 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 TNFSF13O75888 250 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 TIMP1P01033 207 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 IRF2P14316 349 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 TIGITQ495A1 244 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 FA2HQ7L5A8 372 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 MRGPREQ86SM8 312 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 OTOSQ8NHW6 89 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 CALHM2Q9HA72 323 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 LRIT1Q9P2V4 623 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 MRM2Q9UI43 246 aaKnown RBP11.48□□□□□ -0.57
VAMP4-201ENST00000236192 YBX2Q9Y2T7 364 aaKnown RBP11.48□□□□□ -0.57
VAMP4-201ENST00000236192 IL2RAP01589 272 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 RPS27P42677 84 aaKnown RBP11.48□□□□□ -0.57
VAMP4-201ENST00000236192 CDKN2AP42771 156 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms