RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 ATP1B3P54709 279 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 BDH1Q02338 343 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 YIF1BQ5BJH7 314 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 TEX36Q5VZQ5 186 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 LAIR2Q6ISS4 152 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 HAGHLQ6PII5 290 aaPredicted RBP9.45□□□□□ -0.9
SF3B6-201ENST00000233468 LHFPL2Q6ZUX7 228 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 GCSAMQ8N6F7 178 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 NANOGP1Q8N7R0 232 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 DEFB108BQ8NET1 73 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 RPL3LQ92901 407 aaKnown RBP9.45□□□□□ -0.9
SF3B6-201ENST00000233468 TMEM186Q96B77 213 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 SMIM19Q96E16 107 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 NEIL1Q96FI4 390 aaPredicted RBP9.45□□□□□ -0.9
SF3B6-201ENST00000233468 PDCD1LG2Q9BQ51 273 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 TMEM246Q9BRR3 403 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 PKIBQ9C010 78 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 DCAF16Q9NXF7 216 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 RASL12Q9NYN1 266 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 DNAJB11Q9UBS4 358 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 PPIAL4CA0A0B4J2A2 164 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 A0A0G2JMP0 313 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 A0A0X1KG70 313 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 FAM230AA0A1W2PPH8 454 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 PQLC2LA1A4F0 135 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 A6NIN4 97 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 SRRM5B3KS81 715 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 E9PI62 339 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 J3QT63 122 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 DENRO43583 198 aaKnown RBP9.44□□□□□ -0.9
SF3B6-201ENST00000233468 MRPS14O60783 128 aaKnown RBP9.44□□□□□ -0.9
SF3B6-201ENST00000233468 ALX3O95076 343 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 ZNF205O95201 554 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 CD1AP06126 327 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 ATF1P18846 271 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 GLRA1P23415 457 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 EEF1B2P24534 225 aaKnown RBP9.44□□□□□ -0.9
SF3B6-201ENST00000233468 IL2RGP31785 369 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 GTF2A1P52655 376 aaPredicted RBP9.44□□□□□ -0.9
SF3B6-201ENST00000233468 SLC35A2P78381 396 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 SRSF2Q01130 221 aaKnown RBP9.44□□□□□ -0.9
SF3B6-201ENST00000233468 C11orf91Q3C1V1 193 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 CD276Q5ZPR3 534 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 SFRP4Q6FHJ7 346 aaPredicted RBP9.44□□□□□ -0.9
SF3B6-201ENST00000233468 ZNF826PQ6ZT77 177 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 SLC36A1Q7Z2H8 476 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 WDR86Q86TI4 376 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 C11orf53Q8IXP5 236 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 OR4M2Q8NGB6 313 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 AQP3Q92482 292 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 TMIGD2Q96BF3 282 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 YTHDF1Q9BYJ9 559 aaKnown RBP9.44□□□□□ -0.9
SF3B6-201ENST00000233468 CCDC90BQ9GZT6 254 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 DNTTIP1Q9H147 329 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 DUSP21Q9H596 190 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 ZCCHC4Q9H5U6 513 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 PPP1R3EQ9H7J1 279 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 HIF1ANQ9NWT6 349 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 CKLFQ9UBR5 152 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 CLN8Q9UBY8 286 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 OR5V1Q9UGF6 321 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 CDC42EP3Q9UKI2 254 aa9.44□□□□□ -0.9
SF3B6-201ENST00000233468 NKX6-3A6NJ46 265 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 FAM157AC9JC47 383 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 F5H0A9 414 aaPredicted RBP9.43□□□□□ -0.9
SF3B6-201ENST00000233468 J3QLI3 93 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 PHF1O43189 567 aaPredicted RBP9.43□□□□□ -0.9
SF3B6-201ENST00000233468 NOS1APO75052 506 aaPredicted RBP9.43□□□□□ -0.9
SF3B6-201ENST00000233468 MT-ND2P03891 347 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 ACAA1P09110 424 aaPredicted RBP9.43□□□□□ -0.9
SF3B6-201ENST00000233468 WNT2P09544 360 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 RAB3AP20336 220 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 CRHBPP24387 322 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 MAPK3P27361 379 aaPredicted RBP9.43□□□□□ -0.9
SF3B6-201ENST00000233468 CD80P33681 288 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 PITPNBP48739 271 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 MTCP1P56278 107 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 GNB2P62879 340 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 PPP3R1P63098 170 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 ACSM1Q08AH1 577 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 IL24Q13007 206 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 SCGB2A2Q13296 93 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 SPHARQ15513 63 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 UBE2V2Q15819 145 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 SMIM21Q3B7S5 101 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 CHRFAM7AQ494W8 412 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 FAM201AQ5SY85 155 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 DMKNQ6E0U4 476 aaPredicted RBP9.43□□□□□ -0.9
SF3B6-201ENST00000233468 FIP1L1Q6UN15 594 aaKnown RBP9.43□□□□□ -0.9
SF3B6-201ENST00000233468 PRSS48Q7RTY5 328 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 FAM90A1Q86YD7 464 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 MKXQ8IYA7 352 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 Q8IYB0 196 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 MS4A15Q8N5U1 240 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 PARP16Q8N5Y8 322 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 TRMT10AQ8TBZ6 339 aaKnown RBP9.43□□□□□ -0.9
SF3B6-201ENST00000233468 RPS4Y2Q8TD47 263 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 GHSRQ92847 366 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 ADAT3Q96EY9 351 aaPredicted RBP9.43□□□□□ -0.9
SF3B6-201ENST00000233468 MED30Q96HR3 178 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms