RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 GAS1P54826 345 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 PCBD1P61457 104 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 FUT7Q11130 342 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 HMGN3Q15651 99 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 PRSS54Q6PEW0 395 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 RSPO3Q9BXY4 272 aaPredicted RBP12.19□□□□□ -0.46
NFKB1-201ENST00000226574 WDR13Q9H1Z4 485 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 DNAJB11Q9UBS4 358 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 CREBBPQ92793 2442 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 LOC105371267A0A1B0GV96 52 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 A0A1W2PPC1 479 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 A0A1W2PPE2 198 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 FTCDNL1E5RQL4 147 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 NXPH2O95156 264 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 CST4P01036 141 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 FABP1P07148 127 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 TBPP20226 339 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 MEOX2P50222 304 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 TGIF1Q15583 401 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 ZNF774Q6NX45 483 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.19□□□□□ -0.46
NFKB1-201ENST00000226574 PLEKHA3Q9HB20 300 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 TNFSF18Q9UNG2 199 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 TP53TG5Q9Y2B4 290 aa12.19□□□□□ -0.46
NFKB1-201ENST00000226574 HOXD4P09016 255 aaPredicted RBP12.18□□□□□ -0.46
NFKB1-201ENST00000226574 GABRA2P47869 451 aa12.18□□□□□ -0.46
NFKB1-201ENST00000226574 PDLIM3Q53GG5 364 aaPredicted RBP12.18□□□□□ -0.46
NFKB1-201ENST00000226574 AWAT1Q58HT5 328 aa12.18□□□□□ -0.46
NFKB1-201ENST00000226574 SYT13Q7L8C5 426 aa12.18□□□□□ -0.46
NFKB1-201ENST00000226574 SLC25A42Q86VD7 318 aa12.18□□□□□ -0.46
NFKB1-201ENST00000226574 SLC17A5Q9NRA2 495 aa12.18□□□□□ -0.46
NFKB1-201ENST00000226574 AADACP22760 399 aa12.18□□□□□ -0.46
NFKB1-201ENST00000226574 RPS11P62280 158 aaKnown RBP eCLIP12.18□□□□□ -0.46
NFKB1-201ENST00000226574 CATSPERDQ86XM0 798 aa12.18□□□□□ -0.46
NFKB1-201ENST00000226574 LHX4Q969G2 390 aa12.18□□□□□ -0.46
NFKB1-201ENST00000226574 CABLES2Q9BTV7 478 aa12.18□□□□□ -0.46
NFKB1-201ENST00000226574 SAMD10Q9BYL1 202 aa12.18□□□□□ -0.46
NFKB1-201ENST00000226574 C19orf12Q9NSK7 152 aa12.18□□□□□ -0.46
NFKB1-201ENST00000226574 TRAV39A0A0B4J263 110 aa12.18□□□□□ -0.46
NFKB1-201ENST00000226574 A0A1W2PPQ1 181 aa12.18□□□□□ -0.46
NFKB1-201ENST00000226574 MFSD2BA6NFX1 497 aa12.18□□□□□ -0.46
NFKB1-201ENST00000226574 TNFSF14O43557 240 aa12.18□□□□□ -0.46
NFKB1-201ENST00000226574 CYTIPO60759 359 aa12.18□□□□□ -0.46
NFKB1-201ENST00000226574 FPR2P25090 351 aa12.18□□□□□ -0.46
NFKB1-201ENST00000226574 OR2T2Q6IF00 324 aa12.18□□□□□ -0.46
NFKB1-201ENST00000226574 UBAC2Q8NBM4 344 aa12.18□□□□□ -0.46
NFKB1-201ENST00000226574 NOXO1Q8NFA2 376 aa12.18□□□□□ -0.46
NFKB1-201ENST00000226574 MRPS24Q96EL2 167 aaKnown RBP12.18□□□□□ -0.46
NFKB1-201ENST00000226574 TVP23CQ96ET8 276 aa12.18□□□□□ -0.46
NFKB1-201ENST00000226574 PLEKHA2Q9HB19 425 aa12.18□□□□□ -0.46
NFKB1-201ENST00000226574 GNG12Q9UBI6 72 aa12.18□□□□□ -0.46
NFKB1-201ENST00000226574 HSPB2A8KAH6 182 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 SIRPB1O00241 398 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 HSPB2Q16082 182 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 ZNF468Q5VIY5 522 aaPredicted RBP12.17□□□□□ -0.46
NFKB1-201ENST00000226574 OR2A2Q6IF42 318 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 TFAP2EQ6VUC0 442 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 LYZL2Q7Z4W2 148 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 C9orf40Q8IXQ3 194 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 ARHGEF39Q8N4T4 335 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 SLC25A43Q8WUT9 341 aaPredicted RBP12.17□□□□□ -0.46
NFKB1-201ENST00000226574 MRGPRX4Q96LA9 322 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 PIPOXQ9P0Z9 390 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 DUSP13Q9UII6 198 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 DOCK9Q9BZ29 2069 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 IGKV1D-42A0A075B6H8 117 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 PRR32B1ATL7 298 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 MDKP21741 143 aaPredicted RBP12.17□□□□□ -0.46
NFKB1-201ENST00000226574 DUSP3P51452 185 aaPredicted RBP12.17□□□□□ -0.46
NFKB1-201ENST00000226574 OR5C1Q8NGR4 320 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 TM4SF19Q96DZ7 209 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 MVB12AQ96EY5 273 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 PIK3IP1Q96FE7 263 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 NPDC1Q9NQX5 325 aaPredicted RBP12.17□□□□□ -0.46
NFKB1-201ENST00000226574 IGHV1OR21-1A0A087WYE8 117 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 C7orf77A4D0Y5 90 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 OR6C6A6NF89 314 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 HBE1P02100 147 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 ASAH2BP0C7U1 165 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 ZNF528Q3MIS6 628 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 DMBX1Q8NFW5 382 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 OR10J5Q8NHC4 309 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 RAB18Q9NP72 206 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 LPAR3Q9UBY5 353 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 TTC28Q96AY4 2481 aa12.17□□□□□ -0.46
NFKB1-201ENST00000226574 SERPINE3A8MV23 424 aa12.16□□□□□ -0.46
NFKB1-201ENST00000226574 FAM157BP0CG42 384 aa12.16□□□□□ -0.46
NFKB1-201ENST00000226574 MUC1P15941 1255 aaPredicted RBP12.16□□□□□ -0.46
NFKB1-201ENST00000226574 FZD5Q13467 585 aa12.16□□□□□ -0.46
NFKB1-201ENST00000226574 WIPI1Q5MNZ9 446 aaPredicted RBP12.16□□□□□ -0.46
NFKB1-201ENST00000226574 OSR2Q8N2R0 312 aa12.16□□□□□ -0.46
NFKB1-201ENST00000226574 OR8U1Q8NH10 309 aa12.16□□□□□ -0.46
NFKB1-201ENST00000226574 UCN2Q96RP3 112 aa12.16□□□□□ -0.46
NFKB1-201ENST00000226574 ANKUB1A6NFN9 424 aa12.16□□□□□ -0.46
NFKB1-201ENST00000226574 TTRP02766 147 aa12.16□□□□□ -0.46
NFKB1-201ENST00000226574 FABP4P15090 132 aa12.16□□□□□ -0.46
NFKB1-201ENST00000226574 GLB1P16278 677 aa12.16□□□□□ -0.46
NFKB1-201ENST00000226574 SSTP61278 116 aa12.16□□□□□ -0.46
NFKB1-201ENST00000226574 UQCC3Q6UW78 93 aa12.16□□□□□ -0.46
NFKB1-201ENST00000226574 SPACA9Q96E40 222 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms