RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 SUPT4H1P63272 117 aaKnown RBP21.76■■□□□ 1.07
RUNDC3A-201ENST00000225441 SRSF6Q13247 344 aaKnown RBP21.76■■□□□ 1.07
RUNDC3A-201ENST00000225441 CLN3Q13286 438 aa21.76■■□□□ 1.07
RUNDC3A-201ENST00000225441 ATP1A1-AS1Q5TC04 95 aa21.76■■□□□ 1.07
RUNDC3A-201ENST00000225441 EIF5AL1Q6IS14 154 aaKnown RBP21.76■■□□□ 1.07
RUNDC3A-201ENST00000225441 CRIP3Q6Q6R5 217 aa21.76■■□□□ 1.07
RUNDC3A-201ENST00000225441 ARL11Q969Q4 196 aa21.76■■□□□ 1.07
RUNDC3A-201ENST00000225441 CYTL1Q9NRR1 136 aa21.76■■□□□ 1.07
RUNDC3A-201ENST00000225441 HPF1Q9NWY4 346 aa21.76■■□□□ 1.07
RUNDC3A-201ENST00000225441 PCDHB10Q9UN67 800 aa21.76■■□□□ 1.07
RUNDC3A-201ENST00000225441 ABCD4O14678 606 aa21.75■■□□□ 1.07
RUNDC3A-201ENST00000225441 TPD52L2O43399 206 aaKnown RBP21.75■■□□□ 1.07
RUNDC3A-201ENST00000225441 MRPS34P82930 218 aaKnown RBP21.75■■□□□ 1.07
RUNDC3A-201ENST00000225441 IL15RAQ13261 267 aa21.75■■□□□ 1.07
RUNDC3A-201ENST00000225441 CHRFAM7AQ494W8 412 aa21.75■■□□□ 1.07
RUNDC3A-201ENST00000225441 FAM27BQ5VT28 67 aa21.75■■□□□ 1.07
RUNDC3A-201ENST00000225441 OR9K2Q8NGE7 335 aa21.75■■□□□ 1.07
RUNDC3A-201ENST00000225441 PAQR8Q8TEZ7 354 aa21.75■■□□□ 1.07
RUNDC3A-201ENST00000225441 SPSB1Q96BD6 273 aa21.75■■□□□ 1.07
RUNDC3A-201ENST00000225441 SH2D2AQ9NP31 389 aa21.75■■□□□ 1.07
RUNDC3A-201ENST00000225441 C14orf166Q9Y224 244 aaKnown RBP21.75■■□□□ 1.07
RUNDC3A-201ENST00000225441 DNASE2O00115 360 aaPredicted RBP21.74■■□□□ 1.07
RUNDC3A-201ENST00000225441 ZNF468Q5VIY5 522 aaPredicted RBP21.74■■□□□ 1.07
RUNDC3A-201ENST00000225441 POC1AQ8NBT0 407 aa21.74■■□□□ 1.07
RUNDC3A-201ENST00000225441 SAT2Q96F10 170 aaPredicted RBP21.74■■□□□ 1.07
RUNDC3A-201ENST00000225441 EHFQ9NZC4 300 aa21.74■■□□□ 1.07
RUNDC3A-201ENST00000225441 FOXD3Q9UJU5 478 aaPredicted RBP21.74■■□□□ 1.07
RUNDC3A-201ENST00000225441 TMEM218A2RU14 115 aa21.73■■□□□ 1.07
RUNDC3A-201ENST00000225441 RPS2P15880 293 aaKnown RBP21.73■■□□□ 1.07
RUNDC3A-201ENST00000225441 ITGA3P26006 1051 aa21.73■■□□□ 1.07
RUNDC3A-201ENST00000225441 RAC1P63000 192 aa21.73■■□□□ 1.07
RUNDC3A-201ENST00000225441 IL34Q6ZMJ4 242 aa21.73■■□□□ 1.07
RUNDC3A-201ENST00000225441 RTN4RL2Q86UN3 420 aa21.73■■□□□ 1.07
RUNDC3A-201ENST00000225441 C20orf196Q8IYI0 205 aa21.73■■□□□ 1.07
RUNDC3A-201ENST00000225441 ZSCAN4Q8NAM6 433 aaPredicted RBP21.73■■□□□ 1.07
RUNDC3A-201ENST00000225441 OR1S2Q8NGQ3 325 aa21.73■■□□□ 1.07
RUNDC3A-201ENST00000225441 ST6GALNAC5Q9BVH7 336 aa21.73■■□□□ 1.07
RUNDC3A-201ENST00000225441 NKX6-2Q9C056 277 aaPredicted RBP21.73■■□□□ 1.07
RUNDC3A-201ENST00000225441 DECR2Q9NUI1 292 aa21.73■■□□□ 1.07
RUNDC3A-201ENST00000225441 A0A1W2PP11 408 aa21.73■■□□□ 1.07
RUNDC3A-201ENST00000225441 H0YIZ8 118 aa21.73■■□□□ 1.07
RUNDC3A-201ENST00000225441 M0R135 149 aa21.73■■□□□ 1.07
RUNDC3A-201ENST00000225441 ATG12O94817 140 aa21.73■■□□□ 1.07
RUNDC3A-201ENST00000225441 HPNP05981 417 aa21.73■■□□□ 1.07
RUNDC3A-201ENST00000225441 UBE2V2Q15819 145 aa21.73■■□□□ 1.07
RUNDC3A-201ENST00000225441 PRAMEF20Q5VT98 475 aa21.73■■□□□ 1.07
RUNDC3A-201ENST00000225441 ZNF799Q96GE5 643 aa21.73■■□□□ 1.07
RUNDC3A-201ENST00000225441 METTL8Q9H825 291 aaKnown RBP21.73■■□□□ 1.07
RUNDC3A-201ENST00000225441 C1orf123Q9NWV4 160 aa21.73■■□□□ 1.07
RUNDC3A-201ENST00000225441 ZNF391Q9UJN7 358 aa21.73■■□□□ 1.07
RUNDC3A-201ENST00000225441 HSF4Q9ULV5 492 aa21.73■■□□□ 1.07
RUNDC3A-201ENST00000225441 F5H5K5 113 aa21.72■■□□□ 1.07
RUNDC3A-201ENST00000225441 NKX2-8O15522 239 aa21.72■■□□□ 1.07
RUNDC3A-201ENST00000225441 FCGR2AP12318 317 aa21.72■■□□□ 1.07
RUNDC3A-201ENST00000225441 WT1P19544 449 aaPredicted RBP21.72■■□□□ 1.07
RUNDC3A-201ENST00000225441 SPINK2P20155 84 aa21.72■■□□□ 1.07
RUNDC3A-201ENST00000225441 SLC9A3R2Q15599 337 aa21.72■■□□□ 1.07
RUNDC3A-201ENST00000225441 ANKRD55Q3KP44 614 aa21.72■■□□□ 1.07
RUNDC3A-201ENST00000225441 C10orf91Q5T1B1 145 aa21.72■■□□□ 1.07
RUNDC3A-201ENST00000225441 UNQ6126/PRO20091Q6UXV3 157 aa21.72■■□□□ 1.07
RUNDC3A-201ENST00000225441 SVBPQ8N300 66 aa21.72■■□□□ 1.07
RUNDC3A-201ENST00000225441 SGCZQ96LD1 299 aa21.72■■□□□ 1.07
RUNDC3A-201ENST00000225441 MMP26Q9NRE1 261 aa21.72■■□□□ 1.07
RUNDC3A-201ENST00000225441 PIGLQ9Y2B2 252 aa21.72■■□□□ 1.07
RUNDC3A-201ENST00000225441 ZIC3O60481 467 aa21.71■■□□□ 1.07
RUNDC3A-201ENST00000225441 CBR3O75828 277 aa21.71■■□□□ 1.07
RUNDC3A-201ENST00000225441 CSTBP04080 98 aaKnown RBP21.71■■□□□ 1.07
RUNDC3A-201ENST00000225441 CCL3P10147 92 aa21.71■■□□□ 1.07
RUNDC3A-201ENST00000225441 DEFA5Q01523 94 aa21.71■■□□□ 1.07
RUNDC3A-201ENST00000225441 ZNF169Q14929 603 aaPredicted RBP21.71■■□□□ 1.07
RUNDC3A-201ENST00000225441 RAB35Q15286 201 aa21.71■■□□□ 1.07
RUNDC3A-201ENST00000225441 RSPO1Q2MKA7 263 aaPredicted RBP21.71■■□□□ 1.07
RUNDC3A-201ENST00000225441 NKAPLQ5M9Q1 402 aa21.71■■□□□ 1.07
RUNDC3A-201ENST00000225441 SULF2Q8IWU5 870 aa21.71■■□□□ 1.07
RUNDC3A-201ENST00000225441 CLRN3Q8NCR9 226 aa21.71■■□□□ 1.07
RUNDC3A-201ENST00000225441 PIGQQ9BRB3 760 aa21.71■■□□□ 1.07
RUNDC3A-201ENST00000225441 SCNM1Q9BWG6 230 aa21.71■■□□□ 1.07
RUNDC3A-201ENST00000225441 ASF1BQ9NVP2 202 aa21.71■■□□□ 1.07
RUNDC3A-201ENST00000225441 DKKL1Q9UK85 242 aa21.71■■□□□ 1.07
RUNDC3A-201ENST00000225441 PRELID1Q9Y255 219 aa21.71■■□□□ 1.07
RUNDC3A-201ENST00000225441 ARGFXA6NJG6 315 aa21.71■■□□□ 1.07
RUNDC3A-201ENST00000225441 E9PLN8 166 aa21.71■■□□□ 1.07
RUNDC3A-201ENST00000225441 CTSDP07339 412 aaPredicted RBP21.71■■□□□ 1.07
RUNDC3A-201ENST00000225441 PABPC1L2AQ5JQF8 200 aa21.71■■□□□ 1.07
RUNDC3A-201ENST00000225441 PLXDC2Q6UX71 529 aa21.71■■□□□ 1.07
RUNDC3A-201ENST00000225441 C1QL2Q7Z5L3 287 aa21.71■■□□□ 1.07
RUNDC3A-201ENST00000225441 RRNAD1Q96FB5 475 aaKnown RBP21.71■■□□□ 1.07
RUNDC3A-201ENST00000225441 WASF3Q9UPY6 502 aa21.71■■□□□ 1.07
RUNDC3A-201ENST00000225441 IFNA2P01563 188 aa21.7■■□□□ 1.06
RUNDC3A-201ENST00000225441 RRADP55042 308 aa21.7■■□□□ 1.06
RUNDC3A-201ENST00000225441 PHYHD1Q5SRE7 291 aa21.7■■□□□ 1.06
RUNDC3A-201ENST00000225441 PDSS1Q5T2R2 415 aa21.7■■□□□ 1.06
RUNDC3A-201ENST00000225441 ABHD17BQ5VST6 288 aa21.7■■□□□ 1.06
RUNDC3A-201ENST00000225441 RAET1LQ5VY80 246 aa21.7■■□□□ 1.06
RUNDC3A-201ENST00000225441 ATRAIDQ6UW56 229 aa21.7■■□□□ 1.06
RUNDC3A-201ENST00000225441 Q96M66 194 aa21.7■■□□□ 1.06
RUNDC3A-201ENST00000225441 ULBP2Q9BZM5 246 aa21.7■■□□□ 1.06
RUNDC3A-201ENST00000225441 OR5H15A6NDH6 313 aa21.69■■□□□ 1.06
RUNDC3A-201ENST00000225441 CST2P09228 141 aa21.69■■□□□ 1.06
RUNDC3A-201ENST00000225441 FAHP16930 419 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms