RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 GVINP1Q7Z2Y8 2422 aa13.11□□□□□ -0.31
UBE2D4-201ENST00000222402 LRP3O75074 770 aa13.11□□□□□ -0.31
UBE2D4-201ENST00000222402 CD8AP01732 235 aa13.11□□□□□ -0.31
UBE2D4-201ENST00000222402 MELTFP08582 738 aa13.11□□□□□ -0.31
UBE2D4-201ENST00000222402 UBE2V2Q15819 145 aa13.11□□□□□ -0.31
UBE2D4-201ENST00000222402 ACER2Q5QJU3 275 aa13.11□□□□□ -0.31
UBE2D4-201ENST00000222402 LHFPL2Q6ZUX7 228 aa13.11□□□□□ -0.31
UBE2D4-201ENST00000222402 P4HA3Q7Z4N8 544 aa13.11□□□□□ -0.31
UBE2D4-201ENST00000222402 OSR2Q8N2R0 312 aa13.11□□□□□ -0.31
UBE2D4-201ENST00000222402 PRR18Q8N4B5 295 aa13.11□□□□□ -0.31
UBE2D4-201ENST00000222402 KCNE4Q8WWG9 221 aa13.11□□□□□ -0.31
UBE2D4-201ENST00000222402 C5orf66Q9H5L9 145 aa13.11□□□□□ -0.31
UBE2D4-201ENST00000222402 KCNMB2Q9Y691 235 aa13.11□□□□□ -0.31
UBE2D4-201ENST00000222402 TK1P04183 234 aa13.11□□□□□ -0.31
UBE2D4-201ENST00000222402 IKZF1Q13422 519 aa13.11□□□□□ -0.31
UBE2D4-201ENST00000222402 VAX1Q5SQQ9 334 aa13.11□□□□□ -0.31
UBE2D4-201ENST00000222402 NMES1Q9C002 83 aa13.11□□□□□ -0.31
UBE2D4-201ENST00000222402 DNTTIP1Q9H147 329 aa13.11□□□□□ -0.31
UBE2D4-201ENST00000222402 RGCCQ9H4X1 137 aa13.11□□□□□ -0.31
UBE2D4-201ENST00000222402 FIGNL2A6NMB9 653 aa13.11□□□□□ -0.31
UBE2D4-201ENST00000222402 HPP00738 406 aa13.11□□□□□ -0.31
UBE2D4-201ENST00000222402 SRD5A2P31213 254 aa13.11□□□□□ -0.31
UBE2D4-201ENST00000222402 M1APQ8TC57 530 aa13.11□□□□□ -0.31
UBE2D4-201ENST00000222402 DYRK2Q92630 601 aa13.11□□□□□ -0.31
UBE2D4-201ENST00000222402 EP300Q09472 2414 aaPredicted RBP13.11□□□□□ -0.31
UBE2D4-201ENST00000222402 OR6C65A6NJZ3 312 aa13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 TRAPPC2LH3BP13 241 aa13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 RPL35P42766 123 aaKnown RBP13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 IL1F10Q8WWZ1 152 aa13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 SULT4A1Q9BR01 284 aa13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 MYOZ1Q9NP98 299 aaPredicted RBP13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 P4HTMQ9NXG6 502 aa13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 OR6C6A6NF89 314 aa13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 K7ESF4 209 aa13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 FGF5P12034 268 aa13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 CD80P33681 288 aa13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 TRA2AQ13595 282 aaKnown RBP eCLIP13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 CSRP2Q16527 193 aa13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 SNAI3Q3KNW1 292 aa13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 PIK3IP1Q96FE7 263 aa13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 SLX1AQ9BQ83 275 aa13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 ZFP57Q9NU63 452 aa13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 SEMA5BQ9P283 1151 aa13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 SRSF10O75494 262 aaKnown RBP13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 RBMXL2O75526 392 aaKnown RBP13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 EPHA1P21709 976 aa13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 TSPO2Q5TGU0 170 aa13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 RPL7L1Q6DKI1 246 aaKnown RBP13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 OVCH2Q7RTZ1 564 aa13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 SLC39A7Q92504 469 aa13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 ANGPTL4Q9BY76 406 aa13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 OR5AC2Q9NZP5 309 aa13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 ANXA10Q9UJ72 324 aa13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 CEP250Q9BV73 2442 aa13.1□□□□□ -0.31
UBE2D4-201ENST00000222402 PTPRZ1P23471 2315 aaPredicted RBP13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 ZNF587BE7ETH6 402 aa13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 GPR31O00270 319 aa13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 IL32P24001 234 aa13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 MRPS34P82930 218 aaKnown RBP13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 SLC25A53Q5H9E4 307 aa13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 LGI3Q8N145 548 aa13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 ZSCAN4Q8NAM6 433 aaPredicted RBP13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 SGK3Q96BR1 496 aa13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 ZNF837Q96EG3 531 aaPredicted RBP13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 EDARQ9UNE0 448 aa13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 DOCK7Q96N67 2140 aa13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 A0A0U1RQV5 110 aa13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 C5orf49A4QMS7 147 aa13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 ZNHIT1O43257 154 aa13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 PDGFBP01127 241 aaPredicted RBP13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 ZNF44P15621 663 aa13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 CLINT1Q14677 625 aa13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 CCDC54Q8NEL0 328 aa13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 ABHD3Q8WU67 409 aa13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 FAM212BQ9NTI7 297 aaPredicted RBP13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 PILRBQ9UKJ0 227 aa13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 RNF222A6NCQ9 220 aa13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 MFNGO00587 321 aa13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 GEMIN2O14893 280 aaKnown RBP13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 FGF2P09038 288 aa13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 COX6A1P12074 109 aa13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 DUSP1P28562 367 aa13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 PABPC1L2AQ5JQF8 200 aa13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 MRPL14Q6P1L8 145 aaKnown RBP13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 EDEM2Q9BV94 578 aa13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 FAM96BQ9Y3D0 163 aa13.09□□□□□ -0.31
UBE2D4-201ENST00000222402 IGKV1-9A0A0C4DH69 117 aa13.08□□□□□ -0.31
UBE2D4-201ENST00000222402 CCL2P13500 99 aa13.08□□□□□ -0.31
UBE2D4-201ENST00000222402 PRF1P14222 555 aa13.08□□□□□ -0.31
UBE2D4-201ENST00000222402 SPINK2P20155 84 aa13.08□□□□□ -0.31
UBE2D4-201ENST00000222402 MLF1P58340 268 aa13.08□□□□□ -0.31
UBE2D4-201ENST00000222402 ANKRD55Q3KP44 614 aa13.08□□□□□ -0.31
UBE2D4-201ENST00000222402 CLEC9AQ6UXN8 241 aa13.08□□□□□ -0.31
UBE2D4-201ENST00000222402 Q6ZRG5 221 aa13.08□□□□□ -0.31
UBE2D4-201ENST00000222402 KCNS2Q9ULS6 477 aa13.08□□□□□ -0.31
UBE2D4-201ENST00000222402 MYO7BQ6PIF6 2116 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 A0A0A6YYD4 124 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 NXPH3O95157 252 aa13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 CSRP1P21291 193 aaKnown RBP13.08□□□□□ -0.32
UBE2D4-201ENST00000222402 APLNRP35414 380 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms