RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 PHLDA2Q53GA4 152 aa12.28□□□□□ -0.44
USH1C-201ENST00000005226 LYZL2Q7Z4W2 148 aa12.28□□□□□ -0.44
USH1C-201ENST00000005226 SGPP2Q8IWX5 399 aa12.28□□□□□ -0.44
USH1C-201ENST00000005226 MOB1AQ9H8S9 216 aa12.28□□□□□ -0.44
USH1C-201ENST00000005226 RCL1Q9Y2P8 373 aaKnown RBP12.28□□□□□ -0.44
USH1C-201ENST00000005226 TIMM10BQ9Y5J6 103 aa12.28□□□□□ -0.44
USH1C-201ENST00000005226 OR2B8PP59922 312 aa12.27□□□□□ -0.44
USH1C-201ENST00000005226 EIF5AP63241 154 aaKnown RBP12.27□□□□□ -0.44
USH1C-201ENST00000005226 ECH1Q13011 328 aa12.27□□□□□ -0.44
USH1C-201ENST00000005226 OGFOD3Q6PK18 319 aa12.27□□□□□ -0.44
USH1C-201ENST00000005226 PLXDC1Q8IUK5 500 aa12.27□□□□□ -0.44
USH1C-201ENST00000005226 FAM24BQ8N5W8 94 aa12.27□□□□□ -0.44
USH1C-201ENST00000005226 HSD17B11Q8NBQ5 300 aa12.27□□□□□ -0.44
USH1C-201ENST00000005226 OR2AE1Q8NHA4 323 aa12.27□□□□□ -0.44
USH1C-201ENST00000005226 RHBDD1Q8TEB9 315 aa12.27□□□□□ -0.44
USH1C-201ENST00000005226 CHRNA10Q9GZZ6 450 aa12.27□□□□□ -0.44
USH1C-201ENST00000005226 PADI1Q9ULC6 663 aa12.27□□□□□ -0.44
USH1C-201ENST00000005226 FBXO7Q9Y3I1 522 aa12.27□□□□□ -0.44
USH1C-201ENST00000005226 SHANK1Q9Y566 2161 aa12.27□□□□□ -0.45
USH1C-201ENST00000005226 EML6Q6ZMW3 1958 aa12.27□□□□□ -0.45
USH1C-201ENST00000005226 C5orf52A6NGY3 159 aa12.27□□□□□ -0.45
USH1C-201ENST00000005226 NAT2P11245 290 aa12.27□□□□□ -0.45
USH1C-201ENST00000005226 CCL1P22362 96 aa12.27□□□□□ -0.45
USH1C-201ENST00000005226 PIGPP57054 158 aa12.27□□□□□ -0.45
USH1C-201ENST00000005226 NHLH2Q02577 135 aa12.27□□□□□ -0.45
USH1C-201ENST00000005226 FABP9Q0Z7S8 132 aa12.27□□□□□ -0.45
USH1C-201ENST00000005226 GUK1Q16774 197 aa12.27□□□□□ -0.45
USH1C-201ENST00000005226 ADAM5Q6NVV9 412 aa12.27□□□□□ -0.45
USH1C-201ENST00000005226 PIGQQ9BRB3 760 aa12.27□□□□□ -0.45
USH1C-201ENST00000005226 RGCCQ9H4X1 137 aa12.27□□□□□ -0.45
USH1C-201ENST00000005226 NIT2Q9NQR4 276 aa12.27□□□□□ -0.45
USH1C-201ENST00000005226 B3GALT1Q9Y5Z6 326 aa12.27□□□□□ -0.45
USH1C-201ENST00000005226 VPS13AQ96RL7 3174 aa12.26□□□□□ -0.45
USH1C-201ENST00000005226 TXNL1O43396 289 aa12.26□□□□□ -0.45
USH1C-201ENST00000005226 JTBO76095 146 aa12.26□□□□□ -0.45
USH1C-201ENST00000005226 OR5AC1P0C628 307 aa12.26□□□□□ -0.45
USH1C-201ENST00000005226 OR5H8P0DN80 308 aa12.26□□□□□ -0.45
USH1C-201ENST00000005226 OR13C7P0DN81 318 aa12.26□□□□□ -0.45
USH1C-201ENST00000005226 PRF1P14222 555 aa12.26□□□□□ -0.45
USH1C-201ENST00000005226 C5orf24Q7Z6I8 188 aa12.26□□□□□ -0.45
USH1C-201ENST00000005226 TMEM156Q8N614 296 aa12.26□□□□□ -0.45
USH1C-201ENST00000005226 OR6X1Q8NH79 312 aa12.26□□□□□ -0.45
USH1C-201ENST00000005226 CD300LFQ8TDQ1 290 aa12.26□□□□□ -0.45
USH1C-201ENST00000005226 ZNF837Q96EG3 531 aaPredicted RBP12.26□□□□□ -0.45
USH1C-201ENST00000005226 MARS2Q96GW9 593 aaKnown RBP12.26□□□□□ -0.45
USH1C-201ENST00000005226 MRGPRX4Q96LA9 322 aa12.26□□□□□ -0.45
USH1C-201ENST00000005226 AKIRIN1Q9H9L7 192 aaPredicted RBP12.26□□□□□ -0.45
USH1C-201ENST00000005226 A0A1W2PPE2 198 aa12.26□□□□□ -0.45
USH1C-201ENST00000005226 FAM230AA0A1W2PPH8 454 aa12.26□□□□□ -0.45
USH1C-201ENST00000005226 ZNF850A8MQ14 1090 aa12.26□□□□□ -0.45
USH1C-201ENST00000005226 G3V3Y1 287 aa12.26□□□□□ -0.45
USH1C-201ENST00000005226 IFNA21P01568 189 aa12.26□□□□□ -0.45
USH1C-201ENST00000005226 NQO2P16083 231 aa12.26□□□□□ -0.45
USH1C-201ENST00000005226 ZNF14P17017 642 aaPredicted RBP12.26□□□□□ -0.45
USH1C-201ENST00000005226 ACKR3P25106 362 aa12.26□□□□□ -0.45
USH1C-201ENST00000005226 SNCAP37840 140 aa12.26□□□□□ -0.45
USH1C-201ENST00000005226 HNRNPKP61978 463 aaKnown RBP eCLIP12.26□□□□□ -0.45
USH1C-201ENST00000005226 PLXDC2Q6UX71 529 aa12.26□□□□□ -0.45
USH1C-201ENST00000005226 C15orf54Q8N8G6 183 aa12.26□□□□□ -0.45
USH1C-201ENST00000005226 OR52M1Q8NGK5 317 aa12.26□□□□□ -0.45
USH1C-201ENST00000005226 OR11L1Q8NGX0 322 aa12.26□□□□□ -0.45
USH1C-201ENST00000005226 WDR77Q9BQA1 342 aaPredicted RBP12.26□□□□□ -0.45
USH1C-201ENST00000005226 SCRT1Q9BWW7 348 aa12.26□□□□□ -0.45
USH1C-201ENST00000005226 RBM24Q9BX46 236 aaKnown RBP12.26□□□□□ -0.45
USH1C-201ENST00000005226 RNF122Q9H9V4 155 aa12.26□□□□□ -0.45
USH1C-201ENST00000005226 CRYM-AS1A6NIL9 109 aa12.25□□□□□ -0.45
USH1C-201ENST00000005226 DUX1O43812 170 aa12.25□□□□□ -0.45
USH1C-201ENST00000005226 PRH1P02810 166 aa12.25□□□□□ -0.45
USH1C-201ENST00000005226 FABP1P07148 127 aa12.25□□□□□ -0.45
USH1C-201ENST00000005226 CAMLGP49069 296 aa12.25□□□□□ -0.45
USH1C-201ENST00000005226 SNAI3Q3KNW1 292 aa12.25□□□□□ -0.45
USH1C-201ENST00000005226 RPUSD3Q6P087 351 aaKnown RBP12.25□□□□□ -0.45
USH1C-201ENST00000005226 OR5L1Q8NGL2 311 aa12.25□□□□□ -0.45
USH1C-201ENST00000005226 OXGR1Q96P68 337 aa12.25□□□□□ -0.45
USH1C-201ENST00000005226 ZNF385AQ96PM9 386 aaKnown RBP12.25□□□□□ -0.45
USH1C-201ENST00000005226 GSN-AS1Q9NRJ2 163 aa12.25□□□□□ -0.45
USH1C-201ENST00000005226 AK3Q9UIJ7 227 aa12.25□□□□□ -0.45
USH1C-201ENST00000005226 ZDHHC8Q9ULC8 765 aa12.25□□□□□ -0.45
USH1C-201ENST00000005226 FRYLO94915 3013 aa12.25□□□□□ -0.45
USH1C-201ENST00000005226 COL5A1P20908 1838 aaPredicted RBP12.25□□□□□ -0.45
USH1C-201ENST00000005226 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.25□□□□□ -0.45
USH1C-201ENST00000005226 TRAV20A0A0B4J274 112 aa12.25□□□□□ -0.45
USH1C-201ENST00000005226 CCDC85CA6NKD9 419 aa12.25□□□□□ -0.45
USH1C-201ENST00000005226 PIAS2O75928 621 aa12.25□□□□□ -0.45
USH1C-201ENST00000005226 ITGA3P26006 1051 aa12.25□□□□□ -0.45
USH1C-201ENST00000005226 NKAIN1Q4KMZ8 207 aa12.25□□□□□ -0.45
USH1C-201ENST00000005226 SLC25A45Q8N413 288 aa12.25□□□□□ -0.45
USH1C-201ENST00000005226 LMAN1LQ9HAT1 526 aa12.25□□□□□ -0.45
USH1C-201ENST00000005226 STARD10Q9Y365 291 aa12.25□□□□□ -0.45
USH1C-201ENST00000005226 KPTNQ9Y664 436 aa12.25□□□□□ -0.45
USH1C-201ENST00000005226 TRBV23-1A0A0A0MS06 115 aa12.24□□□□□ -0.45
USH1C-201ENST00000005226 SLC33A1O00400 549 aaPredicted RBP12.24□□□□□ -0.45
USH1C-201ENST00000005226 SUMO3P55854 103 aaPredicted RBP12.24□□□□□ -0.45
USH1C-201ENST00000005226 MTCP1P56278 107 aa12.24□□□□□ -0.45
USH1C-201ENST00000005226 OPN5Q6U736 354 aa12.24□□□□□ -0.45
USH1C-201ENST00000005226 WDSUB1Q8N9V3 476 aa12.24□□□□□ -0.45
USH1C-201ENST00000005226 OR2M3Q8NG83 312 aa12.24□□□□□ -0.45
USH1C-201ENST00000005226 UCN2Q96RP3 112 aa12.24□□□□□ -0.45
USH1C-201ENST00000005226 SPSB2Q99619 263 aa12.24□□□□□ -0.45
USH1C-201ENST00000005226 EGLN1Q9GZT9 426 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms