RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Bcap31Q61335 245 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 HepacamQ640R3 418 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Tmem127Q8BGP5 238 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Slc38a1Q8K2P7 485 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 SptssaQ8R207 71 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Olfr1094Q8VF13 330 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 GMCL1P1Q99N64 498 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Tex12Q9CR81 123 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Znf319Q9ERR8 581 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Muc5acE9QAQ8 3455 aa18.5■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Gm10439A2AJU2 433 aaKnown RBP18.5■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Vmn1r9A2RST7 299 aa18.5■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Adap1E9PY16 374 aa18.5■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Zfp688E9Q5M9 274 aa18.5■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Vmn1r67G5E8C1 305 aa18.5■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Bnip2O54940 326 aa18.5■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 SnrpbP27048 231 aaKnown RBP18.5■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Cdc25bP30306 576 aa18.5■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 S100a11P50543 98 aaKnown RBP18.5■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Dus4lQ32M08 324 aa18.5■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Glyr1Q922P9 546 aaKnown RBP18.5■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Borcs8Q9D6Y4 120 aa18.5■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 AspdhQ9DCQ2 287 aa18.5■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Olfr896-ps1A0A1L1SRZ8 308 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Amy2P00688 508 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Cbr2P08074 244 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Them4Q3UUI3 230 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Slc17a1Q61983 465 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Snrnp70Q62376 448 aaKnown RBP18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Ovch2Q7M761 609 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Slc6a15Q8BG16 729 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Rab9bQ8BHH2 201 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Coq3Q8BMS4 370 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 AfmidQ8K4H1 305 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Rnf121Q8R1Z9 327 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Olfr656Q8VGX9 329 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Hyal1Q91ZJ9 462 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Ccdc107Q9DCC3 242 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 GlceQ9EPS3 618 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Wdr61Q9ERF3 305 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Ighv1-24A0A0A6YY24 117 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Igkv6-15A0A140T8M5 115 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Gpr31F8VQN3 319 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Alox12bO70582 701 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 ApelaP0DMC4 54 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Cd8bP10300 213 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Oprm1P42866 398 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Fosl2P47930 326 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Itgb8Q0VBD0 767 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Samd12Q0VE29 161 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Gm10912Q3UXH0 145 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 6430531B16RikQ3V2J1 307 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Nkain2Q4PNJ2 208 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Zfp729aQ4QQP3 973 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 PmelQ60696 626 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Snrnp40Q6PE01 358 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Tas2r3Q7TQA7 316 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Slc25a44Q8BGF9 314 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 ArsjQ8BM89 598 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 EogtQ8BYW9 527 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Olfr780Q8VEU0 312 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Acox3Q9EPL9 700 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Tmub1Q9JMG3 245 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Mapk7Q9WVS8 806 aa18.49■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Gm34653A0A1L1SR01 368 aa18.48■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Zfp334A2A4U6 679 aa18.48■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Lcn5A2AJB7 192 aa18.48■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Eif4eP63073 217 aaKnown RBP18.48■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Rsu1Q01730 277 aa18.48■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Hddc2Q3SXD3 199 aa18.48■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Btn1a1Q62556 524 aa18.48■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Olfr304Q7TS03 333 aa18.48■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Trmt61aQ80XC2 290 aa18.48■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Rdh9Q8K5C8 317 aa18.48■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Sf3b4Q8QZY9 424 aaKnown RBP18.48■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Vmn1r21Q8R2C6 297 aa18.48■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Olfr99Q8VFE4 305 aa18.48■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Cnih4Q9CX13 139 aa18.48■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Tmem175Q9CXY1 499 aa18.48■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Tmed11Q9D2R4 215 aa18.48■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Smim23Q9DAL0 136 aa18.48■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 C1galt1Q9JJ06 363 aa18.48■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Kiaa1549Q68FD9 1940 aa18.48■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Gm4858A0A0A6YWS7 318 aa18.47■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 AI182371A2AS37 356 aa18.47■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 LexmA2AVQ5 414 aa18.47■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Mfsd4b5E9PYY6 479 aa18.47■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Lin7bO88951 207 aa18.47■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Atp5j2P56135 88 aaKnown RBP18.47■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 HgfQ08048 728 aa18.47■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Ankrd33bQ3U0L2 486 aa18.47■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Lpcat4Q6NVG1 524 aa18.47■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Chst9Q76EC5 413 aa18.47■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Olfr1162Q7TR28 314 aa18.47■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Gpr139Q80UC8 345 aa18.47■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 RinlQ80UW3 563 aa18.47■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Ssuh2Q8C3L1 340 aa18.47■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Asxl3Q8C4A5 2259 aa18.47■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Vmn1r8Q8R2C2 303 aa18.47■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Dapk2Q8VDF3 370 aa18.47■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 37 ms