RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Sectm1aQ921W8 192 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Neurl1Q923S6 574 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr642Q924X8 314 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Glo1Q9CPU0 184 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Ndufb7Q9CR61 137 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Dppa2Q9CWH0 301 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Rpusd4Q9CWX4 377 aaKnown RBP6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Rab3bQ9CZT8 219 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Psmb3Q9R1P1 205 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr545Q9WU94 316 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Slc7a5Q9Z127 512 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Trbv20A0A0B4J1H5 111 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr419E9Q0Y7 313 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr739E9Q1P0 309 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Gm4181E9Q7X3 184 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Cldn34aG3UW52 211 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Hprt1P00493 218 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 GipP48756 144 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 S100a11P50543 98 aaKnown RBP6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 CdaP56389 146 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 4930480E11RikQ0VG34 394 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Rnf149Q3U2C5 394 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 C1rlQ3UZ09 482 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Cd55bQ61476 407 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Taf6Q62311 678 aaKnown RBP6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Znf260Q62513 407 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Polr2mQ6P6I6 366 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Eci3Q78JN3 317 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Pik3ip1Q7TMJ8 264 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr1061Q7TR72 313 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr1058Q7TR74 316 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Zer1Q80ZJ6 779 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Mfsd8Q8BH31 519 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Csnk1a1Q8BK63 337 aaKnown RBP6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 PcgF3Q8BTQ0 241 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Acaa2Q8BWT1 397 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Hbq1aQ8BYM1 145 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Gm11541Q8C4D8 108 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Wipf1Q8K1I7 493 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr1489Q8VFQ5 313 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Bcdin3dQ91YP1 285 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Vps25Q9CQ80 176 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 OxsmQ9D404 459 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Q9D9C7 252 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Ethe1Q9DCM0 254 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 C1galt1c1Q9JMG2 316 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Stub1Q9WUD1 304 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Pcnx3Q8VI59 2028 aa6.13□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr1018A2ASV3 311 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Gm6890A2BG94 208 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Obp2bA2BHR0 176 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Gm11127A7VMS2 374 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr1511E9PWU0 318 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Gm43517E9PYS1 339 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr1510E9PZZ6 318 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Esp36G3UZD8 160 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Cd59aO55186 123 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 ApelaP0DMC4 54 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Fbxw20Q5U467 468 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Arhgef39Q66JY6 344 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 AI987944Q7TPX5 406 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Slc25a44Q8BGF9 314 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Nabp1Q8BGW5 198 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Gtdc1Q8BW56 445 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Ctdsp2Q8BX07 270 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Tmem125Q8CHQ6 216 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 D2hgdhQ8CIM3 535 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Adhfe1Q8R0N6 465 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Vmn1r215Q8R264 300 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Rhbdl1Q8VC82 373 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Plxdc1Q91ZV7 500 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Med6Q921D4 246 aaKnown RBP6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Rnaseh2cQ9CQ18 166 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 1700029P11RikQ9CQ68 150 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Mettl18Q9CZ09 362 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Efcab10Q9D581 132 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 ShpkQ9D5J6 476 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr948Q9EQ95 321 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 RbmxQ9WV02 391 aaKnown RBP6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Trbc1A0A0A6YWV4 173 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Olfr896-ps1A0A1L1SRZ8 308 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Scgb2b3D2XZ38 112 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Gm4177D3YTX5 305 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Gm16434J3QN10 205 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Vmn1r127K7N6J5 305 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Vmn1r142K7N6U0 305 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Vmn1r94K7N6X3 305 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Vmn1r115K7N6Y3 295 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Vmn1r159K7N701 305 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Sult2a4L7N245 285 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 4930555G01RikL7N253 205 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 BckdkO55028 412 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Gpr50O88495 591 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 P01852 173 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 P18524 117 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Wnt4P22724 351 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Dlx2P40764 332 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Cldn18P56857 264 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Tcfl5Q32NY8 489 aa6.12□□□□□ -1.43
Bdnf-201ENSMUST00000053317 Tmem69Q3KQJ0 245 aa6.12□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 39.9 ms