RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 ITPKCQ96DU7 683 aa6.2□□□□□ -1.42
PHGDH-225ENST00000641720 SMIM19Q96E16 107 aa6.2□□□□□ -1.42
PHGDH-225ENST00000641720 ADAT3Q96EY9 351 aaPredicted RBP6.2□□□□□ -1.42
PHGDH-225ENST00000641720 MEGF10Q96KG7 1140 aa6.2□□□□□ -1.42
PHGDH-225ENST00000641720 PGLYRP3Q96LB9 341 aa6.2□□□□□ -1.42
PHGDH-225ENST00000641720 SUCNR1Q9BXA5 334 aa6.2□□□□□ -1.42
PHGDH-225ENST00000641720 MS4A5Q9H3V2 200 aa6.2□□□□□ -1.42
PHGDH-225ENST00000641720 TRIM36Q9NQ86 728 aa6.2□□□□□ -1.42
PHGDH-225ENST00000641720 ZNF275Q9NSD4 429 aaPredicted RBP6.2□□□□□ -1.42
PHGDH-225ENST00000641720 TMEM100Q9NV29 134 aa6.2□□□□□ -1.42
PHGDH-225ENST00000641720 CHCHD3Q9NX63 227 aaKnown RBP6.2□□□□□ -1.42
PHGDH-225ENST00000641720 DCAF16Q9NXF7 216 aa6.2□□□□□ -1.42
PHGDH-225ENST00000641720 BABAM2Q9NXR7 383 aa6.2□□□□□ -1.42
PHGDH-225ENST00000641720 ERGIC3Q9Y282 383 aa6.2□□□□□ -1.42
PHGDH-225ENST00000641720 PIGLQ9Y2B2 252 aa6.2□□□□□ -1.42
PHGDH-225ENST00000641720 LRCH1Q9Y2L9 728 aa6.2□□□□□ -1.42
PHGDH-225ENST00000641720 PPIAL4AQ9Y536 164 aa6.2□□□□□ -1.42
PHGDH-225ENST00000641720 TRBV2A0A0J9YWF9 115 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 ZNF816-ZNF321PA0A0X1KG74 233 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 TMEM238LA0A1B0GVL6 79 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 TMEM212A6NML5 194 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 ANKRD30BLA7E2S9 258 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 ZNF850A8MQ14 1090 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 OGG1O15527 345 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 PLPP2O43688 288 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 CDC14BO60729 498 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 CST4P01036 141 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 ISG15P05161 165 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 PRTN3P24158 256 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 LIPAP38571 399 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 DDOSTP39656 456 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 MAP2K3P46734 347 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 RPS11P62280 158 aaKnown RBP eCLIP6.19□□□□□ -1.42
PHGDH-225ENST00000641720 MRPS11P82912 194 aaKnown RBP6.19□□□□□ -1.42
PHGDH-225ENST00000641720 MRPL28Q13084 256 aaKnown RBP6.19□□□□□ -1.42
PHGDH-225ENST00000641720 MAB21L1Q13394 359 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 MED22Q15528 200 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 OR8G1Q15617 311 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 PCGF3Q3KNV8 242 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 CCDC58Q4VC31 144 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 CEP78Q5JTW2 689 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 FAM209AQ5JX71 171 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 TMEM244Q5VVB8 128 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 PRAMEF6Q5VXH4 476 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 TMEM42Q69YG0 159 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 DMKNQ6E0U4 476 aaPredicted RBP6.19□□□□□ -1.42
PHGDH-225ENST00000641720 ASPHD2Q6ICH7 369 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 ZNF773Q6PK81 442 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 KRT74Q7RTS7 529 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 EGFL6Q8IUX8 553 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 ZDHHC23Q8IYP9 409 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 SPARTQ8N0X7 666 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 CSNK2A3Q8NEV1 391 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 OR13C3Q8NGS6 347 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 OR51F2Q8NH61 342 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 OR5AK2Q8NH90 309 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 HAVCR2Q8TDQ0 301 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 WFDC12Q8WWY7 111 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 OPALINQ96PE5 141 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 OR2V2Q96R30 315 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 JMJD8Q96S16 334 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 MYCBPQ99417 103 aaPredicted RBP6.19□□□□□ -1.42
PHGDH-225ENST00000641720 NARFLQ9H6Q4 476 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 SAP30LQ9HAJ7 183 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 ACOT13Q9NPJ3 140 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 GPR173Q9NS66 373 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 NKIRAS2Q9NYR9 191 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 ZNF69Q9UC07 566 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 ENPP5Q9UJA9 477 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 ZDHHC8Q9ULC8 765 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 HHLA2Q9UM44 414 aa6.19□□□□□ -1.42
PHGDH-225ENST00000641720 HUWE1Q7Z6Z7 4374 aaKnown RBP6.19□□□□□ -1.42
PHGDH-225ENST00000641720 IGHV1-69-2A0A0G2JMI3 117 aa6.18□□□□□ -1.42
PHGDH-225ENST00000641720 TRBV5-5A0A0J9YX44 114 aa6.18□□□□□ -1.42
PHGDH-225ENST00000641720 ANKRD61A6NGH8 418 aa6.18□□□□□ -1.42
PHGDH-225ENST00000641720 DHRS7CA6NNS2 312 aa6.18□□□□□ -1.42
PHGDH-225ENST00000641720 C3orf80F5H4A9 247 aa6.18□□□□□ -1.42
PHGDH-225ENST00000641720 GMDSO60547 372 aa6.18□□□□□ -1.42
PHGDH-225ENST00000641720 MTRF1O75570 445 aaKnown RBP6.18□□□□□ -1.42
PHGDH-225ENST00000641720 IGHV2-5P01817 119 aa6.18□□□□□ -1.42
PHGDH-225ENST00000641720 ERCC1P07992 297 aaPredicted RBP6.18□□□□□ -1.42
PHGDH-225ENST00000641720 RNASE1P07998 156 aaKnown RBP6.18□□□□□ -1.42
PHGDH-225ENST00000641720 ATP6V1B1P15313 513 aa6.18□□□□□ -1.42
PHGDH-225ENST00000641720 CELP19835 753 aa6.18□□□□□ -1.42
PHGDH-225ENST00000641720 MDKP21741 143 aaPredicted RBP6.18□□□□□ -1.42
PHGDH-225ENST00000641720 TNFSF4P23510 183 aa6.18□□□□□ -1.42
PHGDH-225ENST00000641720 PMELP40967 661 aa6.18□□□□□ -1.42
PHGDH-225ENST00000641720 CD200P41217 278 aa6.18□□□□□ -1.42
PHGDH-225ENST00000641720 GPR6P46095 362 aaPredicted RBP6.18□□□□□ -1.42
PHGDH-225ENST00000641720 SOX2P48431 317 aa6.18□□□□□ -1.42
PHGDH-225ENST00000641720 GPM6AP51674 278 aa6.18□□□□□ -1.42
PHGDH-225ENST00000641720 TAS2R43P59537 309 aa6.18□□□□□ -1.42
PHGDH-225ENST00000641720 BDH1Q02338 343 aa6.18□□□□□ -1.42
PHGDH-225ENST00000641720 EMX1Q04741 257 aaPredicted RBP6.18□□□□□ -1.42
PHGDH-225ENST00000641720 ACSM1Q08AH1 577 aa6.18□□□□□ -1.42
PHGDH-225ENST00000641720 RIPPLY1Q0D2K3 151 aa6.18□□□□□ -1.42
PHGDH-225ENST00000641720 INSL4Q14641 139 aa6.18□□□□□ -1.42
PHGDH-225ENST00000641720 SPHARQ15513 63 aa6.18□□□□□ -1.42
PHGDH-225ENST00000641720 MPPED2Q15777 294 aa6.18□□□□□ -1.42
PHGDH-225ENST00000641720 UBE2V2Q15819 145 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms