RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	HOXC5	Q00444	222 aa		5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	NAAA	Q02083	359 aa		5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	PUDP	Q08623	228 aa		5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	PMS2P3	Q13401	168 aa		5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	OR1Q1	Q15612	314 aa		5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	TMEM249	Q2WGJ8	235 aa		5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	DPPA2	Q7Z7J5	298 aa		5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	HIPK1	Q86Z02	1210 aa		5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	FUNDC1	Q8IVP5	155 aa		5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	OR13F1	Q8NGS4	319 aa		5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	CD300LF	Q8TDQ1	290 aa		5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	GIPC3	Q8TF64	312 aa		5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	GLYATL2	Q8WU03	294 aa		5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	RPL3L	Q92901	407 aa	Known RBP	5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	ZBTB9	Q96C00	473 aa		5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	FBXO17	Q96EF6	278 aa		5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	MRPL53	Q96EL3	112 aa	Known RBP	5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	MAGEB18	Q96M61	343 aa		5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	OR2M2	Q96R28	347 aa		5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	EBF4	Q9BQW3	602 aa		5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	RAB1B	Q9H0U4	201 aa		5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	ACOXL	Q9NUZ1	547 aa		5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	HIF1AN	Q9NWT6	349 aa		5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	MRPL22	Q9NWU5	206 aa	Known RBP	5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	MRPL39	Q9NYK5	338 aa	Known RBP	5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	C1RL	Q9NZP8	487 aa		5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	VAPA	Q9P0L0	249 aa		5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	LRP12	Q9Y561	859 aa		5.29	□□□□□ -1.56
CASC19-238	ENST00000641523	NBEAL1	Q6ZS30	2694 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	IGHV4-30-2	A0A087WSY4	118 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	LOC390937	A0A1W2PQ73	354 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	MEX3A	A1L020	520 aa	Known RBP	5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	DNAJC9-AS1	A6NH13	148 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	BBIP1	A8MTZ0	92 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	TEX46	H3BTG2	121 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	TRAF3IP2	O43734	574 aa	Predicted RBP	5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	CHP2	O43745	196 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	MGRN1	O60291	552 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	CECR9	P0C854	216 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	MSR1	P21757	451 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	AQP1	P29972	269 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	IFNA8	P32881	189 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	PPOX	P50336	477 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	MMP15	P51511	669 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	ARHGDIB	P52566	201 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	POU3F1	Q03052	451 aa	Predicted RBP	5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	KRTAP1-1	Q07627	177 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	SLC3A1	Q07837	685 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	CYLC2	Q14093	348 aa	Predicted RBP	5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	MAPRE2	Q15555	327 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	GSG1	Q2KHT4	349 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	CEACAM16	Q2WEN9	425 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	COQ5	Q5HYK3	327 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	PAGE3	Q5JUK9	113 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	C6orf52	Q5T4I8	152 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	CYB5R2	Q6BCY4	276 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	REP15	Q6BDI9	236 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	C11orf87	Q6NUJ2	197 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	MSRB3	Q8IXL7	192 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	C20orf196	Q8IYI0	205 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	TMEM123	Q8N131	208 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	ZNF525	Q8N782	197 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	OR6N1	Q8NGY5	312 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	SPATA3	Q8NHX4	192 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	GPX8	Q8TED1	209 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	C10orf105	Q8TEF2	133 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	PIGC	Q92535	297 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	HIST1H2AC	Q93077	130 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	TECTB	Q96PL2	329 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	CGREF1	Q99674	301 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	ANKRD60	Q9BZ19	345 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	ULBP2	Q9BZM5	246 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	POLR2J2	Q9GZM3	115 aa	Known RBP	5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	POLR2J3	Q9H1A7	115 aa	Known RBP	5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	SEMA6A	Q9H2E6	1030 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	C1orf198	Q9H425	327 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	SLA2	Q9H6Q3	261 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	TMEM165	Q9HC07	324 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	DYNLRB1	Q9NP97	96 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	SLC52A3	Q9NQ40	469 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	PTTG2	Q9NZH5	202 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	RCC2	Q9P258	522 aa	Known RBP	5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	B3GAT1	Q9P2W7	334 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	ERVK-18	Q9QC07	812 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	WDR83OS	Q9Y284	106 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	PIGL	Q9Y2B2	252 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	POFUT2	Q9Y2G5	429 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	ARFGEF3	Q5TH69	2177 aa		5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	CHD3	Q12873	2000 aa	Known RBP	5.28	□□□□□ -1.56
CASC19-238	ENST00000641523	IGKV1D-42	A0A075B6H8	117 aa		5.27	□□□□□ -1.57
CASC19-238	ENST00000641523	TRAV24	A0A0B4J272	114 aa		5.27	□□□□□ -1.57
CASC19-238	ENST00000641523	TRAPPC13	A5PLN9	417 aa		5.27	□□□□□ -1.57
CASC19-238	ENST00000641523	GMNC	A6NCL1	334 aa		5.27	□□□□□ -1.57
CASC19-238	ENST00000641523		M0R3G1	203 aa		5.27	□□□□□ -1.57
CASC19-238	ENST00000641523	EDF1	O60869	148 aa	Known RBP	5.27	□□□□□ -1.57
CASC19-238	ENST00000641523	DFFB	O76075	338 aa		5.27	□□□□□ -1.57
CASC19-238	ENST00000641523	UBL3	O95164	117 aa		5.27	□□□□□ -1.57
CASC19-238	ENST00000641523	FARS2	O95363	451 aa	Known RBP	5.27	□□□□□ -1.57
CASC19-238	ENST00000641523	RAB36	O95755	333 aa		5.27	□□□□□ -1.57
CASC19-238	ENST00000641523	CLPTM1	O96005	669 aa		5.27	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms