RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 TMUB1Q9BVT8 246 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 PRDM14Q9GZV8 571 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 DNAJB12Q9NXW2 375 aaKnown RBP5.45□□□□□ -1.54
SCN1A-212ENST00000636194 AGRNO00468 2067 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 DIP2CQ9Y2E4 1556 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 C10orf71Q711Q0 1435 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 P01737 135 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 BGLAPP02818 100 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 TYMSP04818 313 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 CD1DP15813 335 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 JUNBP17275 347 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-212ENST00000636194 TAL1P17542 331 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-212ENST00000636194 ADRA1AP35348 466 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 THBS4P35443 961 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 ILKQ13418 452 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 VAX1Q5SQQ9 334 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 TCEAL8Q8IYN2 117 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 ZNF714Q96N38 554 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 FBXL2Q9UKC9 423 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 ELF5Q9UKW6 265 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-212ENST00000636194 MMP17Q9ULZ9 603 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 PLXND1Q9Y4D7 1925 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 F13BP05160 661 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 ACHEP22303 614 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 TSPOP30536 169 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 SSTR2P30874 369 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 PMS2P11Q13670 270 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 ZNF77Q15935 545 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 XKR7Q5GH72 579 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 FAM71F2Q6NXP2 309 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 KIR3DL3Q8N743 410 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 OR10J6PQ8NGY7 276 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 MEGF10Q96KG7 1140 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 ZNF696Q9H7X3 374 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 TMEM167BQ9NRX6 74 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 TNFRSF10CO14798 259 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 CST3P01034 146 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-212ENST00000636194 MALP21145 153 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 LIMK1P53667 647 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 SLC10A2Q12908 348 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-212ENST00000636194 NFATC3Q12968 1075 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 CEACAM7Q14002 265 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 HAPLN4Q86UW8 402 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 CMBLQ96DG6 245 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 METTL26Q96S19 204 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 PEBP4Q96S96 227 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 TOLLIPQ9H0E2 274 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 HIST1H1CP16403 213 aaKnown RBP5.45□□□□□ -1.54
SCN1A-212ENST00000636194 ALKBH1Q13686 389 aaKnown RBP5.45□□□□□ -1.54
SCN1A-212ENST00000636194 DTX2Q86UW9 622 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 DRAXINQ8NBI3 349 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-212ENST00000636194 OR4B1Q8NGF8 309 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 APOBEC3DQ96AK3 386 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-212ENST00000636194 PHYHIPLQ96FC7 376 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 ZNF552Q9H707 407 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-212ENST00000636194 SLIT2O94813 1529 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 C1orf167Q5SNV9 1468 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 SONP18583 2426 aaKnown RBP5.45□□□□□ -1.54
SCN1A-212ENST00000636194 FAM208BQ5VWN6 2430 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 ARRDC5A6NEK1 342 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 SERINC4A6NH21 518 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 SIRPB1O00241 398 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 TIMP1P01033 207 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 GYPBP06028 91 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 CD14P08571 375 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 FGF5P12034 268 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 RPS4Y1P22090 263 aaKnown RBP5.45□□□□□ -1.54
SCN1A-212ENST00000636194 CCR9P51686 369 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 DNLZQ5SXM8 178 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 ANKRD33Q7Z3H0 272 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 TMEM251Q8N6I4 163 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 OR9Q2Q8NGE9 314 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 CLDN23Q96B33 292 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 HIST1H4GQ99525 98 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 SLC25A22Q9H936 323 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 RGPD4Q7Z3J3 1758 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 NME1P15531 152 aaKnown RBP5.45□□□□□ -1.54
SCN1A-212ENST00000636194 SIX1Q15475 284 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-212ENST00000636194 MIDNQ504T8 468 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 DCAF12L1Q5VU92 463 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 WDR25Q64LD2 544 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-212ENST00000636194 LCN15Q6UWW0 184 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 LIAT1Q6ZQX7 453 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 MBOAT2Q6ZWT7 520 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 MED25Q71SY5 747 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 PELI3Q8N2H9 469 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 ADAT3Q96EY9 351 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-212ENST00000636194 SDR39U1Q9NRG7 319 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-212ENST00000636194 RABAC1Q9UI14 185 aa5.45□□□□□ -1.54
SCN1A-212ENST00000636194 MAGI3Q5TCQ9 1506 aa5.44□□□□□ -1.54
SCN1A-212ENST00000636194 LOC389332A0A1B0GUA5 103 aa5.44□□□□□ -1.54
SCN1A-212ENST00000636194 AP4M1O00189 453 aa5.44□□□□□ -1.54
SCN1A-212ENST00000636194 GDNFP39905 211 aa5.44□□□□□ -1.54
SCN1A-212ENST00000636194 SELENBP1Q13228 472 aa5.44□□□□□ -1.54
SCN1A-212ENST00000636194 ELAVL1Q15717 326 aaKnown RBP5.44□□□□□ -1.54
SCN1A-212ENST00000636194 TBPL2Q6SJ96 375 aa5.44□□□□□ -1.54
SCN1A-212ENST00000636194 DCXRQ7Z4W1 244 aa5.44□□□□□ -1.54
SCN1A-212ENST00000636194 DUSP18Q8NEJ0 188 aa5.44□□□□□ -1.54
SCN1A-212ENST00000636194 APIPQ96GX9 242 aa5.44□□□□□ -1.54
SCN1A-212ENST00000636194 SYT17Q9BSW7 474 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms