RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 ADAT3Q96EY9 351 aaPredicted RBP8.15□□□□□ -1.1
LINC00339-210ENST00000635675 TMEM246Q9BRR3 403 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 CHST5Q9GZS9 411 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 PATZ1Q9HBE1 687 aaKnown RBP8.15□□□□□ -1.1
LINC00339-210ENST00000635675 GPR173Q9NS66 373 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 CHCHD3Q9NX63 227 aaKnown RBP8.15□□□□□ -1.1
LINC00339-210ENST00000635675 HHLA2Q9UM44 414 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 PCDHB10Q9UN67 800 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 SIRT4Q9Y6E7 314 aaPredicted RBP8.15□□□□□ -1.1
LINC00339-210ENST00000635675 TRBV2A0A0J9YWF9 115 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 hCG_1807616A0A1W2PRN6 198 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 DPPA5A6NC42 116 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 CCDC160A6NGH7 325 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 TMEM212A6NML5 194 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 CEACAM18A8MTB9 384 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 INAFM1C9JVW0 142 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 F5H0A9 414 aaPredicted RBP8.14□□□□□ -1.11
LINC00339-210ENST00000635675 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.14□□□□□ -1.11
LINC00339-210ENST00000635675 LGALS8O00214 317 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 LALBAP00709 142 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 MSMBP08118 114 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 EGR1P18146 543 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 CPT2P23786 658 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 PSMB9P28065 219 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 RNLSQ5VYX0 342 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 TEX36Q5VZQ5 186 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 SFRP4Q6FHJ7 346 aaPredicted RBP8.14□□□□□ -1.11
LINC00339-210ENST00000635675 FAM166AQ6J272 317 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 NANOGP1Q8N7R0 232 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 BOLLQ8N9W6 283 aaKnown RBP8.14□□□□□ -1.11
LINC00339-210ENST00000635675 DEFB108BQ8NET1 73 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 OR10Z1Q8NGY1 313 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 OR5AK2Q8NH90 309 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 LRRC29Q8WV35 223 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 PP6455Q8WZ26 134 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 AQP3Q92482 292 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 FGGYQ96C11 551 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 PDCD1LG2Q9BQ51 273 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 CDCA4Q9BXL8 241 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 DUSP21Q9H596 190 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 PLEKHA1Q9HB21 404 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 VCX3AQ9NNX9 186 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 NF1P21359 2839 aa8.14□□□□□ -1.11
LINC00339-210ENST00000635675 OOEPA6NGQ2 149 aa8.13□□□□□ -1.11
LINC00339-210ENST00000635675 SRRM5B3KS81 715 aa8.13□□□□□ -1.11
LINC00339-210ENST00000635675 C3orf80F5H4A9 247 aa8.13□□□□□ -1.11
LINC00339-210ENST00000635675 PLPP2O43688 288 aa8.13□□□□□ -1.11
LINC00339-210ENST00000635675 RHBDL1O75783 438 aa8.13□□□□□ -1.11
LINC00339-210ENST00000635675 SERPINA3P01011 423 aa8.13□□□□□ -1.11
LINC00339-210ENST00000635675 TFAP2AP05549 437 aa8.13□□□□□ -1.11
LINC00339-210ENST00000635675 ZFP36P26651 326 aaKnown RBP8.13□□□□□ -1.11
LINC00339-210ENST00000635675 CD80P33681 288 aa8.13□□□□□ -1.11
LINC00339-210ENST00000635675 DVL1P1P54792 670 aaPredicted RBP8.13□□□□□ -1.11
LINC00339-210ENST00000635675 DOC2BQ14184 412 aa8.13□□□□□ -1.11
LINC00339-210ENST00000635675 CDK5R1Q15078 307 aa8.13□□□□□ -1.11
LINC00339-210ENST00000635675 LYPD2Q6UXB3 125 aa8.13□□□□□ -1.11
LINC00339-210ENST00000635675 DCDC5Q6ZRR9 648 aa8.13□□□□□ -1.11
LINC00339-210ENST00000635675 UTS2BQ765I0 119 aa8.13□□□□□ -1.11
LINC00339-210ENST00000635675 FAM90A1Q86YD7 464 aa8.13□□□□□ -1.11
LINC00339-210ENST00000635675 SVOPQ8N4V2 548 aa8.13□□□□□ -1.11
LINC00339-210ENST00000635675 OR13C3Q8NGS6 347 aa8.13□□□□□ -1.11
LINC00339-210ENST00000635675 OR51F2Q8NH61 342 aa8.13□□□□□ -1.11
LINC00339-210ENST00000635675 RGP1Q92546 391 aaPredicted RBP8.13□□□□□ -1.11
LINC00339-210ENST00000635675 TECTBQ96PL2 329 aa8.13□□□□□ -1.11
LINC00339-210ENST00000635675 COMMD4Q9H0A8 199 aa8.13□□□□□ -1.11
LINC00339-210ENST00000635675 LPAR2Q9HBW0 351 aa8.13□□□□□ -1.11
LINC00339-210ENST00000635675 TRIM36Q9NQ86 728 aa8.13□□□□□ -1.11
LINC00339-210ENST00000635675 TMEM160Q9NX00 188 aa8.13□□□□□ -1.11
LINC00339-210ENST00000635675 MIOXQ9UGB7 285 aa8.13□□□□□ -1.11
LINC00339-210ENST00000635675 ARHGAP32A7KAX9 2087 aa8.13□□□□□ -1.11
LINC00339-210ENST00000635675 IGKV1-27A0A075B6S5 117 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 TRAV38-1A0A0B4J264 116 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 TRAV20A0A0B4J274 112 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 IGKV1-9A0A0C4DH69 117 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 MYL12BO14950 172 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 AKR7A2O43488 359 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 NDUFA2O43678 99 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 GATBO75879 557 aaKnown RBP8.12□□□□□ -1.11
LINC00339-210ENST00000635675 INMTO95050 263 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 HSMCR30P0CW71 290 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 MUC1P15941 1255 aaPredicted RBP8.12□□□□□ -1.11
LINC00339-210ENST00000635675 MPZP25189 248 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 HAAOP46952 286 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 FUT6P51993 359 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 WNT4P56705 351 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 SEC61A1P61619 476 aaKnown RBP8.12□□□□□ -1.11
LINC00339-210ENST00000635675 EMX1Q04741 257 aaPredicted RBP8.12□□□□□ -1.11
LINC00339-210ENST00000635675 IRF3Q14653 427 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 MED22Q15528 200 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 KCNJ8Q15842 424 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 DMKNQ6E0U4 476 aaPredicted RBP8.12□□□□□ -1.11
LINC00339-210ENST00000635675 HAGHLQ6PII5 290 aaPredicted RBP8.12□□□□□ -1.11
LINC00339-210ENST00000635675 ZNF841Q6ZN19 808 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 PRSS48Q7RTY5 328 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 GPR141Q7Z602 305 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 GLCCI1Q86VQ1 547 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 ZNF573Q86YE8 665 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 PARP16Q8N5Y8 322 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 ZNF671Q8TAW3 534 aa8.12□□□□□ -1.11
LINC00339-210ENST00000635675 GHSRQ92847 366 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms