RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 PMP22Q01453 160 aa8□□□□□ -1.13
VCL-206ENST00000623461 ZNRF4Q8WWF5 429 aa8□□□□□ -1.13
VCL-206ENST00000623461 APH1AQ96BI3 265 aa8□□□□□ -1.13
VCL-206ENST00000623461 ZNF799Q96GE5 643 aa8□□□□□ -1.13
VCL-206ENST00000623461 ADGRG7Q96K78 797 aa8□□□□□ -1.13
VCL-206ENST00000623461 MUC1P15941 1255 aaPredicted RBP8□□□□□ -1.13
VCL-206ENST00000623461 FCER1GP30273 86 aa8□□□□□ -1.13
VCL-206ENST00000623461 ELOBQ15370 118 aa8□□□□□ -1.13
VCL-206ENST00000623461 ZNF385CQ66K41 422 aaPredicted RBP8□□□□□ -1.13
VCL-206ENST00000623461 CLEC18BQ6UXF7 455 aa8□□□□□ -1.13
VCL-206ENST00000623461 CDC20BQ86Y33 519 aa8□□□□□ -1.13
VCL-206ENST00000623461 SPACA5Q96QH8 159 aa8□□□□□ -1.13
VCL-206ENST00000623461 ZPBPQ9BS86 351 aa8□□□□□ -1.13
VCL-206ENST00000623461 SOX15O60248 233 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 CT45A10P0DMU9 189 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 DRD1P21728 446 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 FOLR3P41439 243 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 GABRA4P48169 554 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 BPIFB3P59826 476 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 ZNF738Q8NE65 137 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 NAT6Q93015 286 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 SPSB1Q96BD6 273 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 RTL8AQ9BWD3 113 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 PRDM7Q9NQW5 492 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 NOSIPQ9Y314 301 aaKnown RBP7.99□□□□□ -1.13
VCL-206ENST00000623461 KIAA1324LA8MWY0 1029 aaPredicted RBP7.99□□□□□ -1.13
VCL-206ENST00000623461 CD99P14209 185 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 FAM3AP98173 230 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 CLN3Q13286 438 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 SHHQ15465 462 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 KHDC3LQ587J8 217 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 FFAR4Q5NUL3 377 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 ATP5SQ99766 215 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 TPPP3Q9BW30 176 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 GDE1Q9NZC3 331 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 AMDHD2Q9Y303 409 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 C3orf85A0A1B0GTC6 90 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 TNFRSF10CO14798 259 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 ONECUT2O95948 504 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 TTRP02766 147 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 GDF1P27539 372 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 CLDN15P56746 228 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 CACNA1CQ13936 2221 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 SHBQ15464 509 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 TMEM104Q8NE00 496 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 PHOSPHO2Q8TCD6 241 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 HHIPQ96QV1 700 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 POLDIP2Q9Y2S7 368 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 CCL27Q9Y4X3 112 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 GAPDHP04406 335 aaKnown RBP7.99□□□□□ -1.13
VCL-206ENST00000623461 ZNF121P58317 390 aaPredicted RBP7.99□□□□□ -1.13
VCL-206ENST00000623461 HLA-DRB5Q30154 266 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 TMEM97Q5BJF2 176 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 PRR27Q6MZM9 219 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 BTNL3Q6UXE8 466 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 FA2HQ7L5A8 372 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 SPNS2Q8IVW8 549 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 WFDC5Q8TCV5 224 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 KCNE4Q8WWG9 221 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 CALHM2Q9HA72 323 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 BOKQ9UMX3 212 aaPredicted RBP7.99□□□□□ -1.13
VCL-206ENST00000623461 TIMM10BQ9Y5J6 103 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 POLR2AP24928 1970 aaKnown RBP7.99□□□□□ -1.13
VCL-206ENST00000623461 IGLV3-16A0A075B6K0 115 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 TRAV34A0A0B4J273 112 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 NPIPB9F8W1W9 429 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 GPR37O15354 613 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 ADAP1O75689 374 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 CFDP00746 253 aaPredicted RBP7.99□□□□□ -1.13
VCL-206ENST00000623461 CEBPBP17676 345 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 SLC37A1P57057 533 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 POLR2GP62487 172 aaKnown RBP eCLIP7.99□□□□□ -1.13
VCL-206ENST00000623461 FZD2Q14332 565 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 ZNF468Q5VIY5 522 aaPredicted RBP7.99□□□□□ -1.13
VCL-206ENST00000623461 ZNF813Q6ZN06 617 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 CA13Q8N1Q1 262 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 OXGR1Q96P68 337 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 LRRC3BQ96PB8 259 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 TMEM191AQ9H0A3 160 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 OR51B6Q9H340 312 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 FAM24AA6NFZ4 105 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 HS3ST1O14792 307 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 SH2D1BO14796 132 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 GEMIN2O14893 280 aaKnown RBP7.99□□□□□ -1.13
VCL-206ENST00000623461 FUT6P51993 359 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 MYPOPQ86VE0 399 aaPredicted RBP7.99□□□□□ -1.13
VCL-206ENST00000623461 CISD2Q8N5K1 135 aaKnown RBP7.99□□□□□ -1.13
VCL-206ENST00000623461 STARD4Q96DR4 205 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 ARHGAP5-AS1Q96IT6 56 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 ELOVL1Q9BW60 279 aa7.99□□□□□ -1.13
VCL-206ENST00000623461 MASP2O00187 686 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 PLRG1O43660 514 aaKnown RBP7.98□□□□□ -1.13
VCL-206ENST00000623461 OR7C2O60412 319 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 RPL13AP40429 203 aaKnown RBP7.98□□□□□ -1.13
VCL-206ENST00000623461 ST3GAL6Q9Y274 331 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 PLXNA1Q9UIW2 1896 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 CXorf65A6NEN9 183 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 ZNF732B4DXR9 585 aa7.98□□□□□ -1.13
VCL-206ENST00000623461 TOX3O15405 576 aaPredicted RBP7.98□□□□□ -1.13
VCL-206ENST00000623461 SELEP16581 610 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms