RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 CLDN17P56750 224 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 DCDP81605 110 aaKnown RBP6.17□□□□□ -1.42
NEDD9-216ENST00000620854 MRPS34P82930 218 aaKnown RBP6.17□□□□□ -1.42
NEDD9-216ENST00000620854 HLA-BQ31612 363 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 ANKRD55Q3KP44 614 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 ZNF260Q3ZCT1 412 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 DCAF12Q5T6F0 453 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 PGAP1Q75T13 922 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 MRPL21Q7Z2W9 205 aaKnown RBP6.17□□□□□ -1.42
NEDD9-216ENST00000620854 OR56B2PQ8NGI1 322 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 TERB2Q8NHR7 220 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 SLC25A43Q8WUT9 341 aaPredicted RBP6.17□□□□□ -1.42
NEDD9-216ENST00000620854 HIST1H2BAQ96A08 127 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 ADAT3Q96EY9 351 aaPredicted RBP6.17□□□□□ -1.42
NEDD9-216ENST00000620854 ENY2Q9NPA8 101 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 FAM86C1Q9NVL1 165 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 LUZP4Q9P127 313 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 MMP24Q9Y5R2 645 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 C7orf77A4D0Y5 90 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 SHISA8B8ZZ34 492 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 IFNA4P05014 189 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 BCKDHBP21953 392 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 SP6Q3SY56 376 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 AWAT1Q58HT5 328 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 OGFOD3Q6PK18 319 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 FIP1L1Q6UN15 594 aaKnown RBP6.17□□□□□ -1.42
NEDD9-216ENST00000620854 SLC30A7Q8NEW0 376 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 SLC26A10Q8NG04 563 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 SNIP1Q8TAD8 396 aaKnown RBP6.17□□□□□ -1.42
NEDD9-216ENST00000620854 IFI44Q8TCB0 444 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 GPBAR1Q8TDU6 330 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 C5orf66Q9H5L9 145 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 TUBG2Q9NRH3 451 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 RCL1Q9Y2P8 373 aaKnown RBP6.17□□□□□ -1.42
NEDD9-216ENST00000620854 CARHSP1Q9Y2V2 147 aaKnown RBP6.17□□□□□ -1.42
NEDD9-216ENST00000620854 TMEM184BQ9Y519 407 aaPredicted RBP6.17□□□□□ -1.42
NEDD9-216ENST00000620854 DOPEY2Q9Y3R5 2298 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 TRAV36DV7A0A075B6V5 113 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 IGKV1D-43A0A0B4J1Z2 117 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 FAM221AA4D161 298 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 ZNF705FA8MVS1 300 aaPredicted RBP6.17□□□□□ -1.42
NEDD9-216ENST00000620854 NPIPB9F8W1W9 429 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 EIF1BO60739 113 aaKnown RBP6.17□□□□□ -1.42
NEDD9-216ENST00000620854 ZNF705DP0CH99 300 aaPredicted RBP6.17□□□□□ -1.42
NEDD9-216ENST00000620854 ZNF705BP0CI00 300 aaPredicted RBP6.17□□□□□ -1.42
NEDD9-216ENST00000620854 EIF1P41567 113 aaKnown RBP6.17□□□□□ -1.42
NEDD9-216ENST00000620854 NXPH1P58417 271 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 ZNF117Q03924 483 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 ECH1Q13011 328 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 TMEM128Q5BJH2 165 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 SOHLH1Q5JUK2 328 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 PLCXD3Q63HM9 321 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 FAM166AQ6J272 317 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 C5orf46Q6UWT4 87 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 APCDD1LQ8NCL9 501 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 OR51E1Q8TCB6 317 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 TSLPQ969D9 159 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 SPIN2AQ99865 258 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 SPIN2BQ9BPZ2 258 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 ZNF251Q9BRH9 671 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 EDEM2Q9BV94 578 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 OR10A2Q9H208 303 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 SLCO5A1Q9H2Y9 848 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 IGHV3-64DA0A0J9YX35 117 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 A0A1B0GX78 115 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 H7C1Q1 480 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 M0R296 226 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 ATXN7O15265 892 aaPredicted RBP6.16□□□□□ -1.42
NEDD9-216ENST00000620854 XRCC2O43543 280 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 IFNA1P01562 189 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 IGHV3-9P01782 118 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 GPR3P46089 330 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 PRSS12P56730 875 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 UBE2KP61086 200 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 RPL27P61353 136 aaKnown RBP6.16□□□□□ -1.42
NEDD9-216ENST00000620854 SKP2Q13309 424 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 PRTGQ2VWP7 1150 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 HIST2H3PS2Q5TEC6 136 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 SLC22A24Q8N4F4 322 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 OR56B1Q8NGI3 324 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 KCNG3Q8TAE7 436 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.16□□□□□ -1.42
NEDD9-216ENST00000620854 EDARADDQ8WWZ3 215 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 HAS2Q92819 552 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 REEP6Q96HR9 211 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 ARHGAP5-AS1Q96IT6 56 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 SUCNR1Q9BXA5 334 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 GCM1Q9NP62 436 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 RAB22AQ9UL26 194 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 SPTAN1Q13813 2472 aaKnown RBP6.16□□□□□ -1.42
NEDD9-216ENST00000620854 SPTBN1Q01082 2364 aaKnown RBP6.16□□□□□ -1.42
NEDD9-216ENST00000620854 CD300LBA8K4G0 201 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 OPRM1P35372 400 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 MPLP40238 635 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 HTR5AP47898 357 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 MFAP5Q13361 173 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 LTC4SQ16873 150 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 MIDNQ504T8 468 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 ABHD17BQ5VST6 288 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 C1orf140Q5VVS0 124 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms