RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 HAGHLQ6PII5 290 aaPredicted RBP9.02□□□□□ -0.97
TARDBP-223ENST00000620632 CRIP3Q6Q6R5 217 aa9.02□□□□□ -0.97
TARDBP-223ENST00000620632 DUX4L9Q6RFH8 374 aaPredicted RBP9.02□□□□□ -0.97
TARDBP-223ENST00000620632 TMPRSS11AQ6ZMR5 421 aa9.02□□□□□ -0.97
TARDBP-223ENST00000620632 FAM90A1Q86YD7 464 aa9.02□□□□□ -0.97
TARDBP-223ENST00000620632 CALHM1Q8IU99 346 aa9.02□□□□□ -0.97
TARDBP-223ENST00000620632 C1orf87Q8N0U7 546 aa9.02□□□□□ -0.97
TARDBP-223ENST00000620632 ZNF676Q8N7Q3 588 aa9.02□□□□□ -0.97
TARDBP-223ENST00000620632 NANOGP1Q8N7R0 232 aa9.02□□□□□ -0.97
TARDBP-223ENST00000620632 LINC01356Q8N9X3 169 aa9.02□□□□□ -0.97
TARDBP-223ENST00000620632 OR13C3Q8NGS6 347 aa9.02□□□□□ -0.97
TARDBP-223ENST00000620632 OR13C5Q8NGS8 318 aa9.02□□□□□ -0.97
TARDBP-223ENST00000620632 OR5AK2Q8NH90 309 aa9.02□□□□□ -0.97
TARDBP-223ENST00000620632 TRMT10AQ8TBZ6 339 aaKnown RBP9.02□□□□□ -0.97
TARDBP-223ENST00000620632 PGLYRP3Q96LB9 341 aa9.02□□□□□ -0.97
TARDBP-223ENST00000620632 OR5M11Q96RB7 305 aa9.02□□□□□ -0.97
TARDBP-223ENST00000620632 ZNF184Q99676 751 aaPredicted RBP9.02□□□□□ -0.97
TARDBP-223ENST00000620632 DUSP21Q9H596 190 aa9.02□□□□□ -0.97
TARDBP-223ENST00000620632 PLEKHA1Q9HB21 404 aa9.02□□□□□ -0.97
TARDBP-223ENST00000620632 BABAM2Q9NXR7 383 aa9.02□□□□□ -0.97
TARDBP-223ENST00000620632 CTSZQ9UBR2 303 aa9.02□□□□□ -0.97
TARDBP-223ENST00000620632 DUX4Q9UBX2 424 aa9.02□□□□□ -0.97
TARDBP-223ENST00000620632 HHLA2Q9UM44 414 aa9.02□□□□□ -0.97
TARDBP-223ENST00000620632 LSM2Q9Y333 95 aaKnown RBP9.02□□□□□ -0.97
TARDBP-223ENST00000620632 PNMA8CA0A1B0GUJ8 204 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 OOEPA6NGQ2 149 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 A8MV72 311 aaPredicted RBP9.01□□□□□ -0.97
TARDBP-223ENST00000620632 KIAA1324LA8MWY0 1029 aaPredicted RBP9.01□□□□□ -0.97
TARDBP-223ENST00000620632 SRRM5B3KS81 715 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 B4DSR2 109 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 LGALS8O00214 317 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 AKR7A2O43488 359 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 PLPP2O43688 288 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 GYPAP02724 150 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 MT-ND2P03891 347 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 MSMBP08118 114 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 WNT2P09544 360 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 AMY2BP19961 511 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 WNT4P56705 351 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 GMFBP60983 142 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 RPS11P62280 158 aaKnown RBP eCLIP9.01□□□□□ -0.97
TARDBP-223ENST00000620632 LCN2P80188 198 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 CCDC58Q4VC31 144 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 RNLSQ5VYX0 342 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 TEX36Q5VZQ5 186 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 FAM166AQ6J272 317 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 ZNF841Q6ZN19 808 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 ANGPTL5Q86XS5 388 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 BATF2Q8N1L9 274 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 MUC20Q8N307 709 aaPredicted RBP9.01□□□□□ -0.97
TARDBP-223ENST00000620632 FGFRL1Q8N441 504 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 SPICQ8N5J4 248 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 CCDC54Q8NEL0 328 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 AQP3Q92482 292 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 C10orf35Q96D05 121 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 RAB39BQ96DA2 213 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 SMIM19Q96E16 107 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 ZNF488Q96MN9 340 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 HIST1H2AAQ96QV6 131 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 MYCBPQ99417 103 aaPredicted RBP9.01□□□□□ -0.97
TARDBP-223ENST00000620632 CDCA4Q9BXL8 241 aa9.01□□□□□ -0.97
TARDBP-223ENST00000620632 CHCHD3Q9NX63 227 aaKnown RBP9.01□□□□□ -0.97
TARDBP-223ENST00000620632 NIPBLQ6KC79 2804 aaeCLIP9□□□□□ -0.97
TARDBP-223ENST00000620632 FAM230AA0A1W2PPH8 454 aa9□□□□□ -0.97
TARDBP-223ENST00000620632 MYL12BO14950 172 aa9□□□□□ -0.97
TARDBP-223ENST00000620632 PHF1O43189 567 aaPredicted RBP9□□□□□ -0.97
TARDBP-223ENST00000620632 DENRO43583 198 aaKnown RBP9□□□□□ -0.97
TARDBP-223ENST00000620632 RPS2P15880 293 aaKnown RBP9□□□□□ -0.97
TARDBP-223ENST00000620632 ZNF12P17014 697 aa9□□□□□ -0.97
TARDBP-223ENST00000620632 HOXB4P17483 251 aaPredicted RBP9□□□□□ -0.97
TARDBP-223ENST00000620632 ATF1P18846 271 aa9□□□□□ -0.97
TARDBP-223ENST00000620632 HAAOP46952 286 aa9□□□□□ -0.97
TARDBP-223ENST00000620632 SOX2P48431 317 aa9□□□□□ -0.97
TARDBP-223ENST00000620632 DVL1P1P54792 670 aaPredicted RBP9□□□□□ -0.97
TARDBP-223ENST00000620632 MED21Q13503 144 aa9□□□□□ -0.97
TARDBP-223ENST00000620632 DCDC5Q6ZRR9 648 aa9□□□□□ -0.97
TARDBP-223ENST00000620632 IL17RELQ6ZVW7 336 aa9□□□□□ -0.97
TARDBP-223ENST00000620632 UTS2BQ765I0 119 aa9□□□□□ -0.97
TARDBP-223ENST00000620632 OR10Z1Q8NGY1 313 aa9□□□□□ -0.97
TARDBP-223ENST00000620632 HAVCR2Q8TDQ0 301 aa9□□□□□ -0.97
TARDBP-223ENST00000620632 PP6455Q8WZ26 134 aa9□□□□□ -0.97
TARDBP-223ENST00000620632 GHSRQ92847 366 aa9□□□□□ -0.97
TARDBP-223ENST00000620632 TMEM186Q96B77 213 aa9□□□□□ -0.97
TARDBP-223ENST00000620632 ORAI1Q96D31 301 aa9□□□□□ -0.97
TARDBP-223ENST00000620632 SPACA5Q96QH8 159 aa9□□□□□ -0.97
TARDBP-223ENST00000620632 COMMD4Q9H0A8 199 aa9□□□□□ -0.97
TARDBP-223ENST00000620632 SMURF1Q9HCE7 757 aa9□□□□□ -0.97
TARDBP-223ENST00000620632 TRIM36Q9NQ86 728 aa9□□□□□ -0.97
TARDBP-223ENST00000620632 SNTG1Q9NSN8 517 aa9□□□□□ -0.97
TARDBP-223ENST00000620632 HIF1ANQ9NWT6 349 aa9□□□□□ -0.97
TARDBP-223ENST00000620632 SCN3BQ9NY72 215 aa9□□□□□ -0.97
TARDBP-223ENST00000620632 PCDHB10Q9UN67 800 aa9□□□□□ -0.97
TARDBP-223ENST00000620632 NF1P21359 2839 aa8.99□□□□□ -0.97
TARDBP-223ENST00000620632 TRAV38-1A0A0B4J264 116 aa8.99□□□□□ -0.97
TARDBP-223ENST00000620632 TRBV5-5A0A0J9YX44 114 aa8.99□□□□□ -0.97
TARDBP-223ENST00000620632 A8MXK9 166 aa8.99□□□□□ -0.97
TARDBP-223ENST00000620632 F8VVB4 439 aa8.99□□□□□ -0.97
TARDBP-223ENST00000620632 F8VWA3 439 aa8.99□□□□□ -0.97
TARDBP-223ENST00000620632 TRAPPC2LH3BP13 241 aa8.99□□□□□ -0.97
TARDBP-223ENST00000620632 J3QT63 122 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms