RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 LYPD3O95274 346 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 KNG1P01042 644 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 NBEAP1P0C6P0 100 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 GIMD1P0DJR0 217 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 KLK2P20151 261 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 PPP1CCP36873 323 aaKnown RBP9.18□□□□□ -0.94
VPS11-207ENST00000620429 FHITP49789 147 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 TMEM33P57088 247 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 BTN3A2P78410 334 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 FOXK1P85037 733 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 BATFQ16520 125 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 TMEM128Q5BJH2 165 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 GRINAQ7Z429 371 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 WDFY1Q8IWB7 410 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 ZNF679Q8IYX0 411 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 APCDD1LQ8NCL9 501 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 AQP3Q92482 292 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 KTI12Q96EK9 354 aaPredicted RBP9.18□□□□□ -0.94
VPS11-207ENST00000620429 RNF2Q99496 336 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 LINC01565O15544 149 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 KAT7O95251 611 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 CSN2P05814 226 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 CCR5P51681 352 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 PRPS1P60891 318 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 RPL19P84098 196 aaKnown RBP9.18□□□□□ -0.94
VPS11-207ENST00000620429 SPEM2Q0P670 501 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 FAM166AQ6J272 317 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 OR4N5Q8IXE1 308 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 OR10C1Q96KK4 312 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 CLUHP3Q96NS8 147 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 KXD1Q9BQD3 176 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 RPP25Q9BUL9 199 aaKnown RBP9.18□□□□□ -0.94
VPS11-207ENST00000620429 CNTD2Q9H8S5 307 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 MBNL1Q9NR56 388 aaKnown RBP9.18□□□□□ -0.94
VPS11-207ENST00000620429 IKZF2Q9UKS7 526 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 RNF150Q9ULK6 438 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 OR1A2Q9Y585 309 aa9.18□□□□□ -0.94
VPS11-207ENST00000620429 C2orf16Q68DN1 1984 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 KMT2EQ8IZD2 1858 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 SLC17A2O00624 439 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 HSPB1P04792 205 aaKnown RBP9.17□□□□□ -0.94
VPS11-207ENST00000620429 DBIP07108 87 aaKnown RBP9.17□□□□□ -0.94
VPS11-207ENST00000620429 SLC6A6P31641 620 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 DRD3P35462 400 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 RAB28P51157 221 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 FGF8P55075 233 aaPredicted RBP9.17□□□□□ -0.94
VPS11-207ENST00000620429 HLA-DRB3P79483 266 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 RAB11BQ15907 218 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 ZNF684Q5T5D7 378 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 H1FOOQ8IZA3 346 aaPredicted RBP9.17□□□□□ -0.94
VPS11-207ENST00000620429 ZNF619Q8N2I2 560 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 LRRC25Q8N386 305 aaPredicted RBP9.17□□□□□ -0.94
VPS11-207ENST00000620429 C10orf53Q8N6V4 93 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 SLC41A2Q96JW4 573 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 NMNAT2Q9BZQ4 307 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 RBKSQ9H477 322 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 FBXO34Q9NWN3 711 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 MEMO1Q9Y316 297 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 AHRRA9YTQ3 701 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 CYR61O00622 381 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 SFT2D2O95562 160 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 PRH1P02810 166 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 CTXN2P0C2S0 81 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 NID1P14543 1247 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 HIST1H1CP16403 213 aaKnown RBP9.17□□□□□ -0.94
VPS11-207ENST00000620429 ZNF708P17019 499 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 SERPINA2P20848 420 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 APOBEC1P41238 236 aaKnown RBP9.17□□□□□ -0.94
VPS11-207ENST00000620429 SOX2P48431 317 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 UBE2G2P60604 165 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 RPS20P60866 119 aaKnown RBP9.17□□□□□ -0.94
VPS11-207ENST00000620429 PNRC1Q12796 327 aaPredicted RBP9.17□□□□□ -0.94
VPS11-207ENST00000620429 CEBPEQ15744 281 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 MLF2Q15773 248 aaPredicted RBP9.17□□□□□ -0.94
VPS11-207ENST00000620429 TMEM176BQ3YBM2 270 aaPredicted RBP9.17□□□□□ -0.94
VPS11-207ENST00000620429 TMEM52BQ4KMG9 183 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 C1orf189Q5VU69 101 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 FAM174AQ8TBP5 190 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 PYGO2Q9BRQ0 406 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 ADAP2Q9NPF8 381 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 SLC7A11Q9UPY5 501 aa9.17□□□□□ -0.94
VPS11-207ENST00000620429 TTC28Q96AY4 2481 aa9.16□□□□□ -0.94
VPS11-207ENST00000620429 MYO9BQ13459 2157 aa9.16□□□□□ -0.94
VPS11-207ENST00000620429 ATG2BQ96BY7 2078 aa9.16□□□□□ -0.94
VPS11-207ENST00000620429 TRPM6Q9BX84 2022 aa9.16□□□□□ -0.94
VPS11-207ENST00000620429 MUC22E2RYF6 1773 aaPredicted RBP9.16□□□□□ -0.94
VPS11-207ENST00000620429 C1QTNF3-AMACRE9PGA6 284 aa9.16□□□□□ -0.94
VPS11-207ENST00000620429 K7N7A8 449 aa9.16□□□□□ -0.94
VPS11-207ENST00000620429 IFNA6P05013 189 aa9.16□□□□□ -0.94
VPS11-207ENST00000620429 GRPRP30550 384 aa9.16□□□□□ -0.94
VPS11-207ENST00000620429 S100A7P31151 101 aa9.16□□□□□ -0.94
VPS11-207ENST00000620429 VAMP2P63027 116 aa9.16□□□□□ -0.94
VPS11-207ENST00000620429 HIST1H3AP68431 136 aa9.16□□□□□ -0.94
VPS11-207ENST00000620429 TEX43Q6ZNM6 134 aa9.16□□□□□ -0.94
VPS11-207ENST00000620429 ZNF627Q7L945 461 aa9.16□□□□□ -0.94
VPS11-207ENST00000620429 TMPRSS7Q7RTY8 843 aa9.16□□□□□ -0.94
VPS11-207ENST00000620429 OR6K6Q8NGW6 343 aa9.16□□□□□ -0.94
VPS11-207ENST00000620429 OR2V1Q8NHB1 315 aa9.16□□□□□ -0.94
VPS11-207ENST00000620429 TMEM170AQ8WVE7 144 aa9.16□□□□□ -0.94
VPS11-207ENST00000620429 COX14Q96I36 57 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms