RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 MAB21L1Q13394 359 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 RAB11BQ15907 218 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 NKPD1Q17RQ9 610 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 C2orf76Q3KRA6 126 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 ZNF404Q494X3 552 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 HES5Q5TA89 166 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 AGAP6Q5VW22 663 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 ASCL4Q6XD76 172 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 ZNF573Q86YE8 665 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 CELF2-AS1Q8N7Q2 184 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 ZNF611Q8N823 705 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 ZSCAN4Q8NAM6 433 aaPredicted RBP6.82□□□□□ -1.32
CPNE3-209ENST00000620393 OR2Z1Q8NG97 314 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 OR4D6Q8NGJ1 314 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 OR6M1Q8NGM8 313 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 MCFD2Q8NI22 146 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 ACOT12Q8WYK0 555 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 AP3S1Q92572 193 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 GTF3AQ92664 365 aaKnown RBP6.82□□□□□ -1.32
CPNE3-209ENST00000620393 DVL3Q92997 716 aaPredicted RBP6.82□□□□□ -1.32
CPNE3-209ENST00000620393 FBXW5Q969U6 566 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 CPNE2Q96FN4 548 aaPredicted RBP6.82□□□□□ -1.32
CPNE3-209ENST00000620393 PSMG3-AS1Q96PY0 264 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 DIRC2Q96SL1 478 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 GPER1Q99527 375 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 ADAT1Q9BUB4 502 aaKnown RBP6.82□□□□□ -1.32
CPNE3-209ENST00000620393 MRI1Q9BV20 369 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 RTL8AQ9BWD3 113 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 MMP27Q9H306 513 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 OR51I2Q9H344 312 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 MS4A5Q9H3V2 200 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 PLGRKTQ9HBL7 147 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 C14orf119Q9NWQ9 140 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 NKIRAS2Q9NYR9 191 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 PTTG2Q9NZH5 202 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 DAPK2Q9UIK4 370 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 FBXO9Q9UK97 447 aaPredicted RBP6.82□□□□□ -1.32
CPNE3-209ENST00000620393 ZDHHC8Q9ULC8 765 aa6.82□□□□□ -1.32
CPNE3-209ENST00000620393 MYO18BQ8IUG5 2567 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 ANKHD1Q8IWZ3 2542 aaKnown RBP6.81□□□□□ -1.32
CPNE3-209ENST00000620393 C17orf100A8MU93 164 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 F5H5P2 479 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 M0R233 179 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 CTDSP2O14595 271 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 PTBP3O95758 552 aaKnown RBP6.81□□□□□ -1.32
CPNE3-209ENST00000620393 CD8AP01732 235 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 IGHV1-46P01743 117 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 GRPP07492 148 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 DANCRP0C864 163 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 UBBP0CG47 229 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 TMEM225BP0DP42 221 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 NAT2P11245 290 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 CD200P41217 278 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 HAAOP46952 286 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 BMXP51813 675 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 CAPZA1P52907 286 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 CLDN12P56749 244 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 SCAND1P57086 179 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 ZP1P60852 638 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 TLE4Q04727 773 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 P2RY14Q15391 338 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 MZT2AQ6P582 158 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 GLIPR1L1Q6UWM5 242 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 C1QL2Q7Z5L3 287 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 CALHM1Q8IU99 346 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 C11orf53Q8IXP5 236 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 SAXO1Q8IYX7 474 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 PNLDC1Q8NA58 520 aaKnown RBP6.81□□□□□ -1.32
CPNE3-209ENST00000620393 PXT1Q8NFP0 134 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 OR10AD1Q8NGE0 317 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 OR51D1Q8NGF3 324 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 ZNF671Q8TAW3 534 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 TNFAIP8L1Q8WVP5 186 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 RFT1Q96AA3 541 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 FAM3DQ96BQ1 224 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 ELMOD3Q96FG2 381 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 NKX3-1Q99801 234 aaPredicted RBP6.81□□□□□ -1.32
CPNE3-209ENST00000620393 PKIBQ9C010 78 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 LIN7BQ9HAP6 207 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 CBLN4Q9NTU7 201 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 FAIMQ9NVQ4 179 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 COMMD3Q9UBI1 195 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 GHRLQ9UBU3 117 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 OR5V1Q9UGF6 321 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 IL19Q9UHD0 177 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 SPATA2Q9UM82 520 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 ING4Q9UNL4 249 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 MRPS28Q9Y2Q9 187 aaKnown RBP6.81□□□□□ -1.32
CPNE3-209ENST00000620393 USP9XQ93008 2570 aaPredicted RBP6.81□□□□□ -1.32
CPNE3-209ENST00000620393 HCFC1P51610 2035 aa6.81□□□□□ -1.32
CPNE3-209ENST00000620393 HEATR1Q9H583 2144 aaKnown RBP6.8□□□□□ -1.32
CPNE3-209ENST00000620393 A0A0B4J203 849 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 LRP5LA4QPB2 252 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 CDIPTO14735 213 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 LDLRAD4O15165 306 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 CLPXO76031 633 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 UBR5O95071 2799 aaPredicted RBP6.8□□□□□ -1.32
CPNE3-209ENST00000620393 BPNT1O95861 308 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 PAHP00439 452 aa6.8□□□□□ -1.32
CPNE3-209ENST00000620393 CD55P08174 381 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms