RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 NPIPA1Q9UND3 350 aa11.86□□□□□ -0.51
PCDHA11-202ENST00000616325 TRBV6-7A0A0A0MS04 114 aa11.86□□□□□ -0.51
PCDHA11-202ENST00000616325 TLE1Q04724 770 aa11.86□□□□□ -0.51
PCDHA11-202ENST00000616325 DLX2Q07687 328 aaPredicted RBP11.86□□□□□ -0.51
PCDHA11-202ENST00000616325 FAM166AQ6J272 317 aa11.86□□□□□ -0.51
PCDHA11-202ENST00000616325 LANCL2Q9NS86 450 aa11.86□□□□□ -0.51
PCDHA11-202ENST00000616325 GPR132Q9UNW8 380 aa11.86□□□□□ -0.51
PCDHA11-202ENST00000616325 FAM157AC9JC47 383 aa11.86□□□□□ -0.51
PCDHA11-202ENST00000616325 TAAR5O14804 337 aa11.86□□□□□ -0.51
PCDHA11-202ENST00000616325 RPL27P61353 136 aaKnown RBP11.86□□□□□ -0.51
PCDHA11-202ENST00000616325 SUPT4H1P63272 117 aaKnown RBP11.86□□□□□ -0.51
PCDHA11-202ENST00000616325 CCL20P78556 96 aa11.86□□□□□ -0.51
PCDHA11-202ENST00000616325 NHLH2Q02577 135 aa11.86□□□□□ -0.51
PCDHA11-202ENST00000616325 PRTGQ2VWP7 1150 aa11.86□□□□□ -0.51
PCDHA11-202ENST00000616325 ZNF784Q8NCA9 323 aaPredicted RBP11.86□□□□□ -0.51
PCDHA11-202ENST00000616325 ARHGAP5-AS1Q96IT6 56 aa11.86□□□□□ -0.51
PCDHA11-202ENST00000616325 ABHD14AQ9BUJ0 271 aa11.86□□□□□ -0.51
PCDHA11-202ENST00000616325 HS3ST3B1Q9Y662 390 aa11.86□□□□□ -0.51
PCDHA11-202ENST00000616325 FRYQ5TBA9 3013 aa11.86□□□□□ -0.51
PCDHA11-202ENST00000616325 TMED7-TICAM2A0A0A6YYA0 188 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 DBX1A6NMT0 343 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 CDAP32320 146 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 ZNF93P35789 620 aaPredicted RBP11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 GABRA4P48169 554 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 FXYD4P59646 89 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 CHRFAM7AQ494W8 412 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 NKAIN1Q4KMZ8 207 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 FAHD2BQ6P2I3 314 aaPredicted RBP11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 ZNF574Q6ZN55 896 aaPredicted RBP11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 Q6ZS52 159 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 OR10AD1Q8NGE0 317 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 FAHD2AQ96GK7 314 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 GNRHR2Q96P88 292 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 HSF4Q9ULV5 492 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 IGKV1D-43A0A0B4J1Z2 117 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 TRGC1P0CF51 173 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 FOSL2P15408 326 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 SNU13P55769 128 aaKnown RBP11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 ERVFRD-1P60508 538 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 SPCS3P61009 180 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 SLC35A1P78382 337 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 DLK1P80370 383 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 TSPO2Q5TGU0 170 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 LANCL3Q6ZV70 420 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 ABHD12BQ7Z5M8 362 aaPredicted RBP11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 SUMF1Q8NBK3 374 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 MRPL24Q96A35 216 aaKnown RBP11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 DUSP15Q9H1R2 295 aaPredicted RBP11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 SLC5A6Q9Y289 635 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 NXPH3O95157 252 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 BCKDHBP21953 392 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 SLC6A9P48067 706 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 SPEM2Q0P670 501 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 LRRC75AQ8NAA5 344 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 SLC26A10Q8NG04 563 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 PTPMT1Q8WUK0 201 aaPredicted RBP11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 TUBA4BQ9H853 241 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 LIPGQ9Y5X9 500 aa11.85□□□□□ -0.51
PCDHA11-202ENST00000616325 WDFY4Q6ZS81 3184 aa11.84□□□□□ -0.51
PCDHA11-202ENST00000616325 PGA4P0DJD7 388 aa11.84□□□□□ -0.51
PCDHA11-202ENST00000616325 PGA5P0DJD9 388 aa11.84□□□□□ -0.51
PCDHA11-202ENST00000616325 ZNF20P17024 532 aa11.84□□□□□ -0.51
PCDHA11-202ENST00000616325 APLNRP35414 380 aa11.84□□□□□ -0.51
PCDHA11-202ENST00000616325 KLHL24Q6TFL4 600 aa11.84□□□□□ -0.51
PCDHA11-202ENST00000616325 BATF2Q8N1L9 274 aa11.84□□□□□ -0.51
PCDHA11-202ENST00000616325 OR51E1Q8TCB6 317 aa11.84□□□□□ -0.51
PCDHA11-202ENST00000616325 THRSPQ92748 146 aa11.84□□□□□ -0.51
PCDHA11-202ENST00000616325 STARD10Q9Y365 291 aa11.84□□□□□ -0.51
PCDHA11-202ENST00000616325 HDGFL3Q9Y3E1 203 aa11.84□□□□□ -0.51
PCDHA11-202ENST00000616325 PCDH15Q96QU1 1955 aa11.84□□□□□ -0.51
PCDHA11-202ENST00000616325 ZNF25P17030 456 aaPredicted RBP11.84□□□□□ -0.51
PCDHA11-202ENST00000616325 RNF4P78317 190 aa11.84□□□□□ -0.51
PCDHA11-202ENST00000616325 C1orf140Q5VVS0 124 aa11.84□□□□□ -0.51
PCDHA11-202ENST00000616325 OPN5Q6U736 354 aa11.84□□□□□ -0.51
PCDHA11-202ENST00000616325 SLC43A2Q8N370 569 aa11.84□□□□□ -0.51
PCDHA11-202ENST00000616325 POC1AQ8NBT0 407 aa11.84□□□□□ -0.51
PCDHA11-202ENST00000616325 FRZBQ92765 325 aa11.84□□□□□ -0.51
PCDHA11-202ENST00000616325 ADAT3Q96EY9 351 aaPredicted RBP11.84□□□□□ -0.51
PCDHA11-202ENST00000616325 SCARF2Q96GP6 870 aaPredicted RBP11.84□□□□□ -0.51
PCDHA11-202ENST00000616325 LMAN1LQ9HAT1 526 aa11.84□□□□□ -0.51
PCDHA11-202ENST00000616325 ZNF724A8MTY0 619 aa11.83□□□□□ -0.51
PCDHA11-202ENST00000616325 BTF3P20290 206 aaKnown RBP11.83□□□□□ -0.51
PCDHA11-202ENST00000616325 PAX6P26367 422 aa11.83□□□□□ -0.51
PCDHA11-202ENST00000616325 SLC37A1P57057 533 aa11.83□□□□□ -0.51
PCDHA11-202ENST00000616325 ZNF429Q86V71 674 aa11.83□□□□□ -0.51
PCDHA11-202ENST00000616325 OR51T1Q8NGJ9 327 aa11.83□□□□□ -0.51
PCDHA11-202ENST00000616325 OR52N5Q8NH56 324 aa11.83□□□□□ -0.51
PCDHA11-202ENST00000616325 RTBDNQ9BSG5 229 aaPredicted RBP11.83□□□□□ -0.51
PCDHA11-202ENST00000616325 TRAV36DV7A0A075B6V5 113 aa11.83□□□□□ -0.52
PCDHA11-202ENST00000616325 MBP02144 154 aa11.83□□□□□ -0.52
PCDHA11-202ENST00000616325 HSD11B1P28845 292 aa11.83□□□□□ -0.52
PCDHA11-202ENST00000616325 IL2RGP31785 369 aa11.83□□□□□ -0.52
PCDHA11-202ENST00000616325 RAB1AP62820 205 aa11.83□□□□□ -0.52
PCDHA11-202ENST00000616325 TLE3Q04726 772 aa11.83□□□□□ -0.52
PCDHA11-202ENST00000616325 HIST2H3PS2Q5TEC6 136 aa11.83□□□□□ -0.52
PCDHA11-202ENST00000616325 TMEM268Q5VZI3 342 aa11.83□□□□□ -0.52
PCDHA11-202ENST00000616325 SULF2Q8IWU5 870 aa11.83□□□□□ -0.52
PCDHA11-202ENST00000616325 ZNF440Q8IYI8 595 aa11.83□□□□□ -0.52
PCDHA11-202ENST00000616325 TMEM123Q8N131 208 aa11.83□□□□□ -0.52
PCDHA11-202ENST00000616325 OR13G1Q8NGZ3 307 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms