RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 OR10Z1Q8NGY1 313 aa13.92□□□□□ -0.18
IRF1-211ENST00000613424 TRMT10AQ8TBZ6 339 aaKnown RBP13.92□□□□□ -0.18
IRF1-211ENST00000613424 NPRL2Q8WTW4 380 aa13.92□□□□□ -0.18
IRF1-211ENST00000613424 RAB39BQ96DA2 213 aa13.92□□□□□ -0.18
IRF1-211ENST00000613424 TECTBQ96PL2 329 aa13.92□□□□□ -0.18
IRF1-211ENST00000613424 OR5M11Q96RB7 305 aa13.92□□□□□ -0.18
IRF1-211ENST00000613424 TMEM246Q9BRR3 403 aa13.92□□□□□ -0.18
IRF1-211ENST00000613424 CCDC90BQ9GZT6 254 aa13.92□□□□□ -0.18
IRF1-211ENST00000613424 PATZ1Q9HBE1 687 aaKnown RBP13.92□□□□□ -0.18
IRF1-211ENST00000613424 PCDHB10Q9UN67 800 aa13.92□□□□□ -0.18
IRF1-211ENST00000613424 DHDHQ9UQ10 334 aa13.92□□□□□ -0.18
IRF1-211ENST00000613424 ZNF281Q9Y2X9 895 aa13.92□□□□□ -0.18
IRF1-211ENST00000613424 LSM2Q9Y333 95 aaKnown RBP13.92□□□□□ -0.18
IRF1-211ENST00000613424 IGKV1-9A0A0C4DH69 117 aa13.91□□□□□ -0.18
IRF1-211ENST00000613424 PNMA8CA0A1B0GUJ8 204 aa13.91□□□□□ -0.18
IRF1-211ENST00000613424 FAM230AA0A1W2PPH8 454 aa13.91□□□□□ -0.18
IRF1-211ENST00000613424 C3orf80F5H4A9 247 aa13.91□□□□□ -0.18
IRF1-211ENST00000613424 LGALS8O00214 317 aa13.91□□□□□ -0.18
IRF1-211ENST00000613424 RHBDL1O75783 438 aa13.91□□□□□ -0.18
IRF1-211ENST00000613424 ATF1P18846 271 aa13.91□□□□□ -0.18
IRF1-211ENST00000613424 EEF1B2P24534 225 aaKnown RBP13.91□□□□□ -0.18
IRF1-211ENST00000613424 HAAOP46952 286 aa13.91□□□□□ -0.18
IRF1-211ENST00000613424 FUT6P51993 359 aa13.91□□□□□ -0.18
IRF1-211ENST00000613424 ACSM1Q08AH1 577 aa13.91□□□□□ -0.18
IRF1-211ENST00000613424 SPHARQ15513 63 aa13.91□□□□□ -0.18
IRF1-211ENST00000613424 HAGHLQ6PII5 290 aaPredicted RBP13.91□□□□□ -0.18
IRF1-211ENST00000613424 ZNF573Q86YE8 665 aa13.91□□□□□ -0.18
IRF1-211ENST00000613424 SERPINA12Q8IW75 414 aa13.91□□□□□ -0.18
IRF1-211ENST00000613424 LINC01356Q8N9X3 169 aa13.91□□□□□ -0.18
IRF1-211ENST00000613424 GPR148Q8TDV2 347 aa13.91□□□□□ -0.18
IRF1-211ENST00000613424 TSEN15Q8WW01 171 aaKnown RBP13.91□□□□□ -0.18
IRF1-211ENST00000613424 AQP3Q92482 292 aa13.91□□□□□ -0.18
IRF1-211ENST00000613424 PGLYRP3Q96LB9 341 aa13.91□□□□□ -0.18
IRF1-211ENST00000613424 BLOC1S6Q9UL45 172 aa13.91□□□□□ -0.18
IRF1-211ENST00000613424 SVEP1Q4LDE5 3571 aa13.9□□□□□ -0.18
IRF1-211ENST00000613424 IGKV1-27A0A075B6S5 117 aa13.9□□□□□ -0.18
IRF1-211ENST00000613424 OOEPA6NGQ2 149 aa13.9□□□□□ -0.18
IRF1-211ENST00000613424 CEACAM18A8MTB9 384 aa13.9□□□□□ -0.18
IRF1-211ENST00000613424 SRRM5B3KS81 715 aa13.9□□□□□ -0.18
IRF1-211ENST00000613424 B4DSR2 109 aa13.9□□□□□ -0.18
IRF1-211ENST00000613424 AKR7A2O43488 359 aa13.9□□□□□ -0.18
IRF1-211ENST00000613424 PLPP2O43688 288 aa13.9□□□□□ -0.18
IRF1-211ENST00000613424 TGFAP01135 160 aa13.9□□□□□ -0.18
IRF1-211ENST00000613424 CD1AP06126 327 aa13.9□□□□□ -0.18
IRF1-211ENST00000613424 WNT2P09544 360 aa13.9□□□□□ -0.18
IRF1-211ENST00000613424 ZNF16P17020 682 aaPredicted RBP13.9□□□□□ -0.18
IRF1-211ENST00000613424 CELP19835 753 aa13.9□□□□□ -0.18
IRF1-211ENST00000613424 SOX2P48431 317 aa13.9□□□□□ -0.18
IRF1-211ENST00000613424 BDH1Q02338 343 aa13.9□□□□□ -0.18
IRF1-211ENST00000613424 CNN3Q15417 329 aaKnown RBP13.9□□□□□ -0.18
IRF1-211ENST00000613424 MED22Q15528 200 aa13.9□□□□□ -0.18
IRF1-211ENST00000613424 TEX36Q5VZQ5 186 aa13.9□□□□□ -0.18
IRF1-211ENST00000613424 ANGPTL5Q86XS5 388 aa13.9□□□□□ -0.18
IRF1-211ENST00000613424 PARP16Q8N5Y8 322 aa13.9□□□□□ -0.18
IRF1-211ENST00000613424 OR5D14Q8NGL3 314 aa13.9□□□□□ -0.18
IRF1-211ENST00000613424 ZNF671Q8TAW3 534 aa13.9□□□□□ -0.18
IRF1-211ENST00000613424 SEH1LQ96EE3 360 aa13.9□□□□□ -0.18
IRF1-211ENST00000613424 BORCS8Q96FH0 119 aa13.9□□□□□ -0.18
IRF1-211ENST00000613424 ZCCHC4Q9H5U6 513 aa13.9□□□□□ -0.18
IRF1-211ENST00000613424 YAE1D1Q9NRH1 226 aa13.9□□□□□ -0.18
IRF1-211ENST00000613424 MIOXQ9UGB7 285 aa13.9□□□□□ -0.18
IRF1-211ENST00000613424 ABCA2Q9BZC7 2435 aa13.9□□□□□ -0.18
IRF1-211ENST00000613424 TLN2Q9Y4G6 2542 aa13.89□□□□□ -0.19
IRF1-211ENST00000613424 IGHV3OR15-7A0A075B7D8 119 aa13.89□□□□□ -0.19
IRF1-211ENST00000613424 TRAV38-1A0A0B4J264 116 aa13.89□□□□□ -0.19
IRF1-211ENST00000613424 F5H0A9 414 aaPredicted RBP13.89□□□□□ -0.19
IRF1-211ENST00000613424 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.89□□□□□ -0.19
IRF1-211ENST00000613424 TNFRSF13BO14836 293 aaPredicted RBP13.89□□□□□ -0.19
IRF1-211ENST00000613424 OCM2P0CE71 109 aa13.89□□□□□ -0.19
IRF1-211ENST00000613424 PRKACBP22694 351 aa13.89□□□□□ -0.19
IRF1-211ENST00000613424 MAP2K4P45985 399 aa13.89□□□□□ -0.19
IRF1-211ENST00000613424 GMFBP60983 142 aa13.89□□□□□ -0.19
IRF1-211ENST00000613424 RPS11P62280 158 aaKnown RBP eCLIP13.89□□□□□ -0.19
IRF1-211ENST00000613424 YIF1BQ5BJH7 314 aa13.89□□□□□ -0.19
IRF1-211ENST00000613424 LYPD2Q6UXB3 125 aa13.89□□□□□ -0.19
IRF1-211ENST00000613424 DCDC5Q6ZRR9 648 aa13.89□□□□□ -0.19
IRF1-211ENST00000613424 CALHM1Q8IU99 346 aa13.89□□□□□ -0.19
IRF1-211ENST00000613424 DNAAF1Q8NEP3 725 aa13.89□□□□□ -0.19
IRF1-211ENST00000613424 OR13C5Q8NGS8 318 aa13.89□□□□□ -0.19
IRF1-211ENST00000613424 OR13C9Q8NGT0 318 aa13.89□□□□□ -0.19
IRF1-211ENST00000613424 YTHDF1Q9BYJ9 559 aaKnown RBP13.89□□□□□ -0.19
IRF1-211ENST00000613424 WDR13Q9H1Z4 485 aa13.89□□□□□ -0.19
IRF1-211ENST00000613424 LPAR2Q9HBW0 351 aa13.89□□□□□ -0.19
IRF1-211ENST00000613424 TRBV5-5A0A0J9YX44 114 aa13.88□□□□□ -0.19
IRF1-211ENST00000613424 J3QT63 122 aa13.88□□□□□ -0.19
IRF1-211ENST00000613424 SYNGR1O43759 233 aa13.88□□□□□ -0.19
IRF1-211ENST00000613424 ALX3O95076 343 aa13.88□□□□□ -0.19
IRF1-211ENST00000613424 GYPAP02724 150 aa13.88□□□□□ -0.19
IRF1-211ENST00000613424 MUC1P15941 1255 aaPredicted RBP13.88□□□□□ -0.19
IRF1-211ENST00000613424 MPZP25189 248 aa13.88□□□□□ -0.19
IRF1-211ENST00000613424 AZGP1P25311 298 aaKnown RBP13.88□□□□□ -0.19
IRF1-211ENST00000613424 RBP2P50120 134 aa13.88□□□□□ -0.19
IRF1-211ENST00000613424 ATP1B3P54709 279 aa13.88□□□□□ -0.19
IRF1-211ENST00000613424 GABARAPL2P60520 117 aa13.88□□□□□ -0.19
IRF1-211ENST00000613424 SEC61A1P61619 476 aaKnown RBP13.88□□□□□ -0.19
IRF1-211ENST00000613424 KCNJ8Q15842 424 aa13.88□□□□□ -0.19
IRF1-211ENST00000613424 MICBQ29980 383 aa13.88□□□□□ -0.19
IRF1-211ENST00000613424 FAM166AQ6J272 317 aa13.88□□□□□ -0.19
IRF1-211ENST00000613424 FAM90A1Q86YD7 464 aa13.88□□□□□ -0.19
IRF1-211ENST00000613424 TMEM106AQ96A25 262 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms