RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 TPTEP56180 551 aa5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 SPATA46Q5T0L3 261 aa5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 KCTD18Q6PI47 426 aaPredicted RBP5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 CRIP3Q6Q6R5 217 aa5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 DPY19L4Q7Z388 723 aa5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 DCXRQ7Z4W1 244 aa5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 ERI1Q8IV48 349 aaKnown RBP5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 LINC00346Q8IVM7 164 aa5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 ZNF101Q8IZC7 436 aa5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 BBS1Q8NFJ9 593 aa5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 OR8B3Q8NGG8 313 aa5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 OR6N2Q8NGY6 317 aa5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 OR5R1Q8NH85 324 aa5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 RHOXF1Q8NHV9 184 aa5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 SLC25A40Q8TBP6 338 aa5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 KLF14Q8TD94 323 aaPredicted RBP5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 RNF133Q8WVZ7 376 aa5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 ITFG2Q969R8 447 aa5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 APOBEC3DQ96AK3 386 aaPredicted RBP5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 ZNF582Q96NG8 517 aaPredicted RBP5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 OR8B2Q96RD0 313 aa5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 CNN2Q99439 309 aaKnown RBP5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 KCNJ15Q99712 375 aa5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 ADI1Q9BV57 179 aa5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 MED20Q9H944 212 aa5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 PNRC2Q9NPJ4 139 aaKnown RBP5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 INPP5EQ9NRR6 644 aa5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 SERTAD4Q9NUC0 356 aa5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 CLN6Q9NWW5 311 aa5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 CLN8Q9UBY8 286 aa5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 CGGBP1Q9UFW8 167 aaPredicted RBP5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 LAMP5Q9UJQ1 280 aa5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 PPP1R3CQ9UQK1 317 aa5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 RRP15Q9Y3B9 282 aaKnown RBP5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 FAM96BQ9Y3D0 163 aa5.85□□□□□ -1.47
PTCHD3P1-201ENST00000612350 IRGMA1A4Y4 181 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 ACOD1A6NK06 481 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 FSTL3O95633 263 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 GHRHP01286 108 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 LIPFP07098 398 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 FBP1P09467 338 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 OR2T7P0C7T2 308 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 GABRB1P18505 474 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 ALOX5APP20292 161 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 CCNOP22674 350 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 ATP6V1E1P36543 226 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 CAPGP40121 348 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 WNT5AP41221 380 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 CSNK2BP67870 215 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 ACTC1P68032 377 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 ACTA1P68133 377 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 ADARB1P78563 741 aaKnown RBP5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 ROM1Q03395 351 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 EIF2B1Q14232 305 aaKnown RBP5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 TAF13Q15543 124 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 ZNF404Q494X3 552 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 ZNF691Q5VV52 312 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 CORO6Q6QEF8 472 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 DRAM2Q6UX65 266 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 LYPD2Q6UXB3 125 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 CFAP77Q6ZQR2 320 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 Q6ZR03 302 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 COLCA1Q6ZS62 124 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 PDZD9Q8IXQ8 264 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 ENTHD1Q8IYW4 607 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 OR4C13Q8NGP0 309 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 OR2T27Q8NH04 317 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 ITLN1Q8WWA0 313 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 CYGBQ8WWM9 190 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 TFAP2CQ92754 450 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 SLAMF6Q96DU3 332 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 RCHY1Q96PM5 261 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 COPS4Q9BT78 406 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 ABHD6Q9BV23 337 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 MROQ9BYG7 248 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 OR2J1Q9GZK6 312 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 OPA3Q9H6K4 179 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 RANBP3Q9H6Z4 567 aaPredicted RBP5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 ADGRL4Q9HBW9 690 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 RPL36Q9Y3U8 105 aaKnown RBP5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 MAB21L2Q9Y586 359 aa5.84□□□□□ -1.47
PTCHD3P1-201ENST00000612350 HUWE1Q7Z6Z7 4374 aaKnown RBP5.83□□□□□ -1.48
PTCHD3P1-201ENST00000612350 ZNF670-ZNF695F2Z2N8 137 aa5.83□□□□□ -1.48
PTCHD3P1-201ENST00000612350 F5H5K5 113 aa5.83□□□□□ -1.48
PTCHD3P1-201ENST00000612350 F8W735 103 aaPredicted RBP5.83□□□□□ -1.48
PTCHD3P1-201ENST00000612350 M0R135 149 aa5.83□□□□□ -1.48
PTCHD3P1-201ENST00000612350 SELENOFO60613 162 aa5.83□□□□□ -1.48
PTCHD3P1-201ENST00000612350 ENTPD6O75354 484 aa5.83□□□□□ -1.48
PTCHD3P1-201ENST00000612350 SULT1C4O75897 302 aa5.83□□□□□ -1.48
PTCHD3P1-201ENST00000612350 FADS2O95864 444 aaKnown RBP5.83□□□□□ -1.48
PTCHD3P1-201ENST00000612350 CYB5R3P00387 301 aaPredicted RBP5.83□□□□□ -1.48
PTCHD3P1-201ENST00000612350 CHRM2P08172 466 aa5.83□□□□□ -1.48
PTCHD3P1-201ENST00000612350 H2BFMP0C1H6 154 aa5.83□□□□□ -1.48
PTCHD3P1-201ENST00000612350 ACSM4P0C7M7 580 aa5.83□□□□□ -1.48
PTCHD3P1-201ENST00000612350 CFL1P23528 166 aaKnown RBP5.83□□□□□ -1.48
PTCHD3P1-201ENST00000612350 HSD11B1P28845 292 aa5.83□□□□□ -1.48
PTCHD3P1-201ENST00000612350 PSMB10P40306 273 aa5.83□□□□□ -1.48
PTCHD3P1-201ENST00000612350 VHLP40337 213 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms