RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 RAB3BP20337 219 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 NFYAP23511 347 aaPredicted RBP6.09□□□□□ -1.43
CBWD1-219ENST00000611457 CDKN1AP38936 164 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 CAV3P56539 151 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 PSG4Q00888 419 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 OLIG3Q7RTU3 272 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 TMEM17Q86X19 198 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 MUC20Q8N307 709 aaPredicted RBP6.09□□□□□ -1.43
CBWD1-219ENST00000611457 SLC30A7Q8NEW0 376 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 SEMA6DQ8NFY4 1073 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 OR5L1Q8NGL2 311 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 OR56B4Q8NH76 319 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 ELMOD3Q96FG2 381 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 NKX6-2Q9C056 277 aaPredicted RBP6.09□□□□□ -1.43
CBWD1-219ENST00000611457 APCP25054 2843 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 ZNF407Q9C0G0 2248 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 A0A0G2JK05 382 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 TRBV4-1A0A0J9YWV2 114 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 A1L4Q6 167 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 PRAF2O60831 178 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 FOXG1P55316 489 aaPredicted RBP6.09□□□□□ -1.43
CBWD1-219ENST00000611457 CLRN1P58418 232 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 MSMPQ1L6U9 139 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 LY6G6FQ5SQ64 297 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 PYHIN1Q6K0P9 492 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 OR1F12Q8NHA8 337 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 NSMAFQ92636 917 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 KCTD12Q96CX2 325 aaKnown RBP6.09□□□□□ -1.43
CBWD1-219ENST00000611457 RNFT2Q96EX2 444 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 CMTM3Q96MX0 182 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 GPA33Q99795 319 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 LINC00574Q9H8X3 128 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 RHCGQ9UBD6 479 aa6.09□□□□□ -1.43
CBWD1-219ENST00000611457 HELZ2Q9BYK8 2649 aaKnown RBP6.09□□□□□ -1.44
CBWD1-219ENST00000611457 IGHV3-15A0A0B4J1V0 119 aa6.09□□□□□ -1.44
CBWD1-219ENST00000611457 SGCEO43556 437 aa6.09□□□□□ -1.44
CBWD1-219ENST00000611457 ALDOBP05062 364 aa6.09□□□□□ -1.44
CBWD1-219ENST00000611457 LPLP06858 475 aa6.09□□□□□ -1.44
CBWD1-219ENST00000611457 COL8A1P27658 744 aa6.09□□□□□ -1.44
CBWD1-219ENST00000611457 FABP6P51161 128 aa6.09□□□□□ -1.44
CBWD1-219ENST00000611457 RPS25P62851 125 aaKnown RBP6.09□□□□□ -1.44
CBWD1-219ENST00000611457 PITPNAQ00169 270 aa6.09□□□□□ -1.44
CBWD1-219ENST00000611457 AADACL4Q5VUY2 407 aa6.09□□□□□ -1.44
CBWD1-219ENST00000611457 CYB5R2Q6BCY4 276 aa6.09□□□□□ -1.44
CBWD1-219ENST00000611457 PGAP1Q75T13 922 aa6.09□□□□□ -1.44
CBWD1-219ENST00000611457 NRMQ8IXM6 262 aa6.09□□□□□ -1.44
CBWD1-219ENST00000611457 SAXO1Q8IYX7 474 aa6.09□□□□□ -1.44
CBWD1-219ENST00000611457 STPG2Q8N412 459 aa6.09□□□□□ -1.44
CBWD1-219ENST00000611457 OR52N1Q8NH53 320 aa6.09□□□□□ -1.44
CBWD1-219ENST00000611457 CXorf58Q96LI9 332 aa6.09□□□□□ -1.44
CBWD1-219ENST00000611457 ZNF649Q9BS31 505 aa6.09□□□□□ -1.44
CBWD1-219ENST00000611457 OR52D1Q9H346 318 aa6.09□□□□□ -1.44
CBWD1-219ENST00000611457 MRPL22Q9NWU5 206 aaKnown RBP6.09□□□□□ -1.44
CBWD1-219ENST00000611457 PIP5K1CO60331 668 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 GASTP01350 101 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 S100A8P05109 93 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 ELK1P19419 428 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 PVALBP20472 110 aaPredicted RBP6.08□□□□□ -1.44
CBWD1-219ENST00000611457 S100A11P31949 105 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 OR1E2P47887 323 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 CCR4P51679 360 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 LSM11P83369 360 aaKnown RBP eCLIP6.08□□□□□ -1.44
CBWD1-219ENST00000611457 CLEC12BQ2HXU8 276 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 HES5Q5TA89 166 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 HAGHLQ6PII5 290 aaPredicted RBP6.08□□□□□ -1.44
CBWD1-219ENST00000611457 ZNF813Q6ZN06 617 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 BTN2A1Q7KYR7 527 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 MYPOPQ86VE0 399 aaPredicted RBP6.08□□□□□ -1.44
CBWD1-219ENST00000611457 C12orf45Q8N5I9 185 aaPredicted RBP6.08□□□□□ -1.44
CBWD1-219ENST00000611457 TCEANCQ8N8B7 351 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 OR52I1Q8NGK6 324 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 SGK3Q96BR1 496 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 NPTNQ9Y639 398 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 CELSR3Q9NYQ7 3312 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 USP9XQ93008 2570 aaPredicted RBP6.08□□□□□ -1.44
CBWD1-219ENST00000611457 LOC100509620A0A075B734 347 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 SELENOFO60613 162 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 PLAUP00749 431 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 RENP00797 406 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 IGHV2-5P01817 119 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 AQP2P41181 271 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 RAP2BP61225 183 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 LMO4P61968 165 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 PIN1Q13526 163 aaPredicted RBP6.08□□□□□ -1.44
CBWD1-219ENST00000611457 IDNKQ5T6J7 187 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 METTL11BQ5VVY1 283 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 ZNF774Q6NX45 483 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 ALKAL2Q6UX46 152 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 SLC16A9Q7RTY1 509 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 OAFQ86UD1 273 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 LDLRAD3Q86YD5 345 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 GID4Q8IVV7 300 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 SPAG16Q8N0X2 631 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 LILRB2Q8N423 598 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 OR8G5Q8NG78 346 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 OR10S1Q8NGN2 331 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 RNF166Q96A37 237 aaPredicted RBP6.08□□□□□ -1.44
CBWD1-219ENST00000611457 NUDT16L1Q9BRJ7 211 aaKnown RBP6.08□□□□□ -1.44
CBWD1-219ENST00000611457 IFT27Q9BW83 186 aa6.08□□□□□ -1.44
CBWD1-219ENST00000611457 CDC42EP3Q9UKI2 254 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms