RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 RIPK1Q13546 671 aa11.92□□□□□ -0.5
HDDC2-209ENST00000609477 ATPAF1Q5TC12 328 aaPredicted RBP11.92□□□□□ -0.5
HDDC2-209ENST00000609477 CD276Q5ZPR3 534 aa11.92□□□□□ -0.5
HDDC2-209ENST00000609477 SFRP4Q6FHJ7 346 aaPredicted RBP11.92□□□□□ -0.5
HDDC2-209ENST00000609477 FAM90A1Q86YD7 464 aa11.92□□□□□ -0.5
HDDC2-209ENST00000609477 DEFB108BQ8NET1 73 aa11.92□□□□□ -0.5
HDDC2-209ENST00000609477 RPL3LQ92901 407 aaKnown RBP11.92□□□□□ -0.5
HDDC2-209ENST00000609477 TMEM80Q96HE8 168 aa11.92□□□□□ -0.5
HDDC2-209ENST00000609477 DMRTB1Q96MA1 342 aa11.92□□□□□ -0.5
HDDC2-209ENST00000609477 CHCHD3Q9NX63 227 aaKnown RBP11.92□□□□□ -0.5
HDDC2-209ENST00000609477 POLDIP2Q9Y2S7 368 aa11.92□□□□□ -0.5
HDDC2-209ENST00000609477 NAV3Q8IVL0 2385 aa11.92□□□□□ -0.5
HDDC2-209ENST00000609477 PQLC2LA1A4F0 135 aa11.91□□□□□ -0.5
HDDC2-209ENST00000609477 OR4C45A6NMZ5 311 aa11.91□□□□□ -0.5
HDDC2-209ENST00000609477 NOS1APO75052 506 aaPredicted RBP11.91□□□□□ -0.5
HDDC2-209ENST00000609477 LIPFP07098 398 aa11.91□□□□□ -0.5
HDDC2-209ENST00000609477 GNAO1P09471 354 aa11.91□□□□□ -0.5
HDDC2-209ENST00000609477 SRP14P37108 136 aaKnown RBP11.91□□□□□ -0.5
HDDC2-209ENST00000609477 RBMXP38159 391 aaKnown RBP11.91□□□□□ -0.5
HDDC2-209ENST00000609477 FUT6P51993 359 aa11.91□□□□□ -0.5
HDDC2-209ENST00000609477 NANOS3P60323 173 aaKnown RBP11.91□□□□□ -0.5
HDDC2-209ENST00000609477 CNN3Q15417 329 aaKnown RBP11.91□□□□□ -0.5
HDDC2-209ENST00000609477 ODF4Q2M2E3 257 aa11.91□□□□□ -0.5
HDDC2-209ENST00000609477 WDR25Q64LD2 544 aaPredicted RBP11.91□□□□□ -0.5
HDDC2-209ENST00000609477 RPL22L1Q6P5R6 122 aaKnown RBP11.91□□□□□ -0.5
HDDC2-209ENST00000609477 BTNL3Q6UXE8 466 aa11.91□□□□□ -0.5
HDDC2-209ENST00000609477 ZNF841Q6ZN19 808 aa11.91□□□□□ -0.5
HDDC2-209ENST00000609477 UTS2BQ765I0 119 aa11.91□□□□□ -0.5
HDDC2-209ENST00000609477 SLC36A1Q7Z2H8 476 aa11.91□□□□□ -0.5
HDDC2-209ENST00000609477 ZNF676Q8N7Q3 588 aa11.91□□□□□ -0.5
HDDC2-209ENST00000609477 BOLLQ8N9W6 283 aaKnown RBP11.91□□□□□ -0.5
HDDC2-209ENST00000609477 DNAAF1Q8NEP3 725 aa11.91□□□□□ -0.5
HDDC2-209ENST00000609477 AQP3Q92482 292 aa11.91□□□□□ -0.5
HDDC2-209ENST00000609477 TMPRSS13Q9BYE2 586 aa11.91□□□□□ -0.5
HDDC2-209ENST00000609477 FGF23Q9GZV9 251 aaPredicted RBP11.91□□□□□ -0.5
HDDC2-209ENST00000609477 COMMD4Q9H0A8 199 aa11.91□□□□□ -0.5
HDDC2-209ENST00000609477 C7orf69Q9H7B7 122 aa11.91□□□□□ -0.5
HDDC2-209ENST00000609477 METTL17Q9H7H0 456 aaPredicted RBP11.91□□□□□ -0.5
HDDC2-209ENST00000609477 ISG20L2Q9H9L3 353 aaKnown RBP11.91□□□□□ -0.5
HDDC2-209ENST00000609477 INSIG2Q9Y5U4 225 aa11.91□□□□□ -0.5
HDDC2-209ENST00000609477 DOCK11Q5JSL3 2073 aa11.91□□□□□ -0.5
HDDC2-209ENST00000609477 TRAPPC2LH3BP13 241 aa11.9□□□□□ -0.5
HDDC2-209ENST00000609477 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.9□□□□□ -0.5
HDDC2-209ENST00000609477 ADAM20O43506 726 aa11.9□□□□□ -0.5
HDDC2-209ENST00000609477 ECDO95905 644 aaPredicted RBP11.9□□□□□ -0.5
HDDC2-209ENST00000609477 EGR1P18146 543 aa11.9□□□□□ -0.5
HDDC2-209ENST00000609477 MPZP25189 248 aa11.9□□□□□ -0.5
HDDC2-209ENST00000609477 CD80P33681 288 aa11.9□□□□□ -0.5
HDDC2-209ENST00000609477 HAAOP46952 286 aa11.9□□□□□ -0.5
HDDC2-209ENST00000609477 HSPA13P48723 471 aa11.9□□□□□ -0.5
HDDC2-209ENST00000609477 SEC61A1P61619 476 aaKnown RBP11.9□□□□□ -0.5
HDDC2-209ENST00000609477 PAX2Q02962 417 aa11.9□□□□□ -0.5
HDDC2-209ENST00000609477 LYPD2Q6UXB3 125 aa11.9□□□□□ -0.5
HDDC2-209ENST00000609477 ZNF771Q7L3S4 317 aaPredicted RBP11.9□□□□□ -0.5
HDDC2-209ENST00000609477 RDH10Q8IZV5 341 aa11.9□□□□□ -0.5
HDDC2-209ENST00000609477 OR52N1Q8NH53 320 aa11.9□□□□□ -0.5
HDDC2-209ENST00000609477 OR5AK2Q8NH90 309 aa11.9□□□□□ -0.5
HDDC2-209ENST00000609477 NANPQ8TBE9 248 aa11.9□□□□□ -0.5
HDDC2-209ENST00000609477 NRG4Q8WWG1 115 aa11.9□□□□□ -0.5
HDDC2-209ENST00000609477 RAB40AQ8WXH6 277 aa11.9□□□□□ -0.5
HDDC2-209ENST00000609477 MED30Q96HR3 178 aa11.9□□□□□ -0.5
HDDC2-209ENST00000609477 MRI1Q9BV20 369 aa11.9□□□□□ -0.5
HDDC2-209ENST00000609477 PKIBQ9C010 78 aa11.9□□□□□ -0.5
HDDC2-209ENST00000609477 NEK6Q9HC98 313 aa11.9□□□□□ -0.5
HDDC2-209ENST00000609477 GPR173Q9NS66 373 aa11.9□□□□□ -0.5
HDDC2-209ENST00000609477 DNAJB11Q9UBS4 358 aa11.9□□□□□ -0.5
HDDC2-209ENST00000609477 SVEP1Q4LDE5 3571 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 TRBV2A0A0J9YWF9 115 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 KIR2DS1A0A191URI9 304 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 J3QT63 122 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 TMPRSS2O15393 492 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 PHF1O43189 567 aaPredicted RBP11.89□□□□□ -0.51
HDDC2-209ENST00000609477 ALX3O95076 343 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 ZFPL1O95159 310 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 GYPAP02724 150 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 ZNF20P17024 532 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 PRKACBP22694 351 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 GLRA1P23415 457 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 ETV1P50549 477 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 PAX8Q06710 450 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 ST3GAL4Q11206 333 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 IL24Q13007 206 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 UBE2V2Q15819 145 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 STUMQ69YW2 141 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 HAGHLQ6PII5 290 aaPredicted RBP11.89□□□□□ -0.51
HDDC2-209ENST00000609477 C1QL2Q7Z5L3 287 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 PRIMA1Q86XR5 153 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 C19orf18Q8NEA5 215 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 GGHQ92820 318 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 DACT3Q96B18 629 aaPredicted RBP11.89□□□□□ -0.51
HDDC2-209ENST00000609477 SPSB1Q96BD6 273 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 TMIGD2Q96BF3 282 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 MMP26Q9NRE1 261 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 BABAM2Q9NXR7 383 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 PSORS1C1Q9UIG5 152 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 METRNQ9UJH8 293 aa11.89□□□□□ -0.51
HDDC2-209ENST00000609477 ANK3Q12955 4377 aaKnown RBP11.89□□□□□ -0.51
HDDC2-209ENST00000609477 LOC105371242A0A075B767 164 aa11.88□□□□□ -0.51
HDDC2-209ENST00000609477 IGHV2-70DA0A0C4DH43 119 aa11.88□□□□□ -0.51
HDDC2-209ENST00000609477 AKR7A2O43488 359 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms