RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 GLRA1P23415 457 aa10.15□□□□□ -0.78
CTSA-210ENST00000606000 ATP6V1E1P36543 226 aa10.15□□□□□ -0.78
CTSA-210ENST00000606000 KIR3DL2P43630 455 aa10.15□□□□□ -0.78
CTSA-210ENST00000606000 ARF6P62330 175 aa10.15□□□□□ -0.78
CTSA-210ENST00000606000 BAMBIQ13145 260 aa10.15□□□□□ -0.78
CTSA-210ENST00000606000 DEFB112Q30KQ8 113 aa10.15□□□□□ -0.78
CTSA-210ENST00000606000 CD276Q5ZPR3 534 aa10.15□□□□□ -0.78
CTSA-210ENST00000606000 C9orf139Q6ZV77 190 aa10.15□□□□□ -0.78
CTSA-210ENST00000606000 CATSPERDQ86XM0 798 aa10.15□□□□□ -0.78
CTSA-210ENST00000606000 PDZD9Q8IXQ8 264 aa10.15□□□□□ -0.78
CTSA-210ENST00000606000 PRSS35Q8N3Z0 413 aa10.15□□□□□ -0.78
CTSA-210ENST00000606000 OR2T27Q8NH04 317 aa10.15□□□□□ -0.78
CTSA-210ENST00000606000 ANGPTL6Q8NI99 470 aa10.15□□□□□ -0.78
CTSA-210ENST00000606000 TRMT10AQ8TBZ6 339 aaKnown RBP10.15□□□□□ -0.78
CTSA-210ENST00000606000 AQP3Q92482 292 aa10.15□□□□□ -0.78
CTSA-210ENST00000606000 RNFT2Q96EX2 444 aa10.15□□□□□ -0.78
CTSA-210ENST00000606000 WDFY2Q96P53 400 aa10.15□□□□□ -0.78
CTSA-210ENST00000606000 NLKQ9UBE8 527 aa10.15□□□□□ -0.78
CTSA-210ENST00000606000 GNG8Q9UK08 70 aa10.15□□□□□ -0.78
CTSA-210ENST00000606000 ORC6Q9Y5N6 252 aa10.15□□□□□ -0.78
CTSA-210ENST00000606000 IGKV1D-17A0A075B6S4 117 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 CENPVL3A0A0U1RRI6 287 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 TMEM89A2RUT3 159 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 NKX6-3A6NJ46 265 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 METTL15A6NJ78 407 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 OR5B21A6NL26 309 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 OR2AT4A6NND4 320 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 NDUFB3O43676 98 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 MTRF1O75570 445 aaKnown RBP10.14□□□□□ -0.79
CTSA-210ENST00000606000 CCL1P22362 96 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 HAAOP46952 286 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 MTNR1AP48039 350 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 TGM4P49221 684 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 CEBPDP49716 269 aaPredicted RBP10.14□□□□□ -0.79
CTSA-210ENST00000606000 ISL1P61371 349 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 SLC9A3R2Q15599 337 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 CLVS2Q5SYC1 327 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 ZBTB37Q5TC79 503 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 TMEM42Q69YG0 159 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 C12orf54Q6X4T0 127 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 RBMS3Q6XE24 437 aaKnown RBP10.14□□□□□ -0.79
CTSA-210ENST00000606000 ZNF788Q6ZQV5 615 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 Q6ZSR3 168 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 SLC36A1Q7Z2H8 476 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 RDH10Q8IZV5 341 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 PQLC1Q8N2U9 271 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 PNLDC1Q8NA58 520 aaKnown RBP10.14□□□□□ -0.79
CTSA-210ENST00000606000 OR5A2Q8NGI9 324 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 NPRL2Q8WTW4 380 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 H1FXQ92522 213 aaKnown RBP10.14□□□□□ -0.79
CTSA-210ENST00000606000 LHX4Q969G2 390 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 C12orf43Q96C57 262 aaKnown RBP10.14□□□□□ -0.79
CTSA-210ENST00000606000 TNFRSF19Q9NS68 423 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 ONECUT1Q9UBC0 465 aa10.14□□□□□ -0.79
CTSA-210ENST00000606000 PQLC2LA1A4F0 135 aa10.13□□□□□ -0.79
CTSA-210ENST00000606000 J3QRE1 110 aa10.13□□□□□ -0.79
CTSA-210ENST00000606000 PSG2P11465 335 aa10.13□□□□□ -0.79
CTSA-210ENST00000606000 GABRB1P18505 474 aa10.13□□□□□ -0.79
CTSA-210ENST00000606000 PRTN3P24158 256 aa10.13□□□□□ -0.79
CTSA-210ENST00000606000 CFPP27918 469 aa10.13□□□□□ -0.79
CTSA-210ENST00000606000 GABRA2P47869 451 aa10.13□□□□□ -0.79
CTSA-210ENST00000606000 SNRPGP62308 76 aaKnown RBP10.13□□□□□ -0.79
CTSA-210ENST00000606000 TMED1Q13445 227 aa10.13□□□□□ -0.79
CTSA-210ENST00000606000 ATPAF1Q5TC12 328 aaPredicted RBP10.13□□□□□ -0.79
CTSA-210ENST00000606000 GPR157Q5UAW9 335 aa10.13□□□□□ -0.79
CTSA-210ENST00000606000 METTL11BQ5VVY1 283 aa10.13□□□□□ -0.79
CTSA-210ENST00000606000 VMO1Q7Z5L0 202 aa10.13□□□□□ -0.79
CTSA-210ENST00000606000 ANGPTL5Q86XS5 388 aa10.13□□□□□ -0.79
CTSA-210ENST00000606000 CALHM1Q8IU99 346 aa10.13□□□□□ -0.79
CTSA-210ENST00000606000 ENTHD1Q8IYW4 607 aa10.13□□□□□ -0.79
CTSA-210ENST00000606000 ZNRF1Q8ND25 227 aa10.13□□□□□ -0.79
CTSA-210ENST00000606000 GCDHQ92947 438 aaPredicted RBP10.13□□□□□ -0.79
CTSA-210ENST00000606000 RFKQ969G6 155 aa10.13□□□□□ -0.79
CTSA-210ENST00000606000 TMIGD2Q96BF3 282 aa10.13□□□□□ -0.79
CTSA-210ENST00000606000 DCTN5Q9BTE1 182 aa10.13□□□□□ -0.79
CTSA-210ENST00000606000 SIRT7Q9NRC8 400 aa10.13□□□□□ -0.79
CTSA-210ENST00000606000 SLC25A10Q9UBX3 287 aaPredicted RBP10.13□□□□□ -0.79
CTSA-210ENST00000606000 ZNF222Q9UK12 451 aa10.13□□□□□ -0.79
CTSA-210ENST00000606000 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.13□□□□□ -0.79
CTSA-210ENST00000606000 MAB21L2Q9Y586 359 aa10.13□□□□□ -0.79
CTSA-210ENST00000606000 GMPPBQ9Y5P6 360 aa10.13□□□□□ -0.79
CTSA-210ENST00000606000 IGKV1-27A0A075B6S5 117 aa10.12□□□□□ -0.79
CTSA-210ENST00000606000 A0A1B0GVI7 797 aa10.12□□□□□ -0.79
CTSA-210ENST00000606000 LOC107986453A0A1B0GWG9 222 aa10.12□□□□□ -0.79
CTSA-210ENST00000606000 FAM230AA0A1W2PPH8 454 aa10.12□□□□□ -0.79
CTSA-210ENST00000606000 ANKRD61A6NGH8 418 aa10.12□□□□□ -0.79
CTSA-210ENST00000606000 J3QT63 122 aa10.12□□□□□ -0.79
CTSA-210ENST00000606000 DLGAP1O14490 977 aa10.12□□□□□ -0.79
CTSA-210ENST00000606000 SIGLEC5O15389 551 aa10.12□□□□□ -0.79
CTSA-210ENST00000606000 HOXA3O43365 443 aaPredicted RBP10.12□□□□□ -0.79
CTSA-210ENST00000606000 SYT7O43581 403 aa10.12□□□□□ -0.79
CTSA-210ENST00000606000 SULT1C4O75897 302 aa10.12□□□□□ -0.79
CTSA-210ENST00000606000 ECDO95905 644 aaPredicted RBP10.12□□□□□ -0.79
CTSA-210ENST00000606000 LIPFP07098 398 aa10.12□□□□□ -0.79
CTSA-210ENST00000606000 NDUFB7P17568 137 aa10.12□□□□□ -0.79
CTSA-210ENST00000606000 OR12D2P58182 307 aa10.12□□□□□ -0.79
CTSA-210ENST00000606000 NANOS3P60323 173 aaKnown RBP10.12□□□□□ -0.79
CTSA-210ENST00000606000 IL13RA1P78552 427 aa10.12□□□□□ -0.79
CTSA-210ENST00000606000 ZNF91Q05481 1191 aa10.12□□□□□ -0.79
CTSA-210ENST00000606000 KLRD1Q13241 179 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms