RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 SFXN3Q9BWM7 321 aa10.17□□□□□ -0.78
VRK3-223ENST00000601341 CHIAQ9BZP6 476 aa10.17□□□□□ -0.78
VRK3-223ENST00000601341 PNRC2Q9NPJ4 139 aaKnown RBP10.17□□□□□ -0.78
VRK3-223ENST00000601341 PROCRQ9UNN8 238 aa10.17□□□□□ -0.78
VRK3-223ENST00000601341 PHF3Q92576 2039 aaKnown RBP10.17□□□□□ -0.78
VRK3-223ENST00000601341 RP1L1Q8IWN7 2480 aaPredicted RBP10.17□□□□□ -0.78
VRK3-223ENST00000601341 SGCEO43556 437 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 RP2O75695 350 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 CRYZL1O95825 349 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 IL18BPO95998 194 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 UBBP0CG47 229 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 GLI4P10075 376 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 GRB2P62993 217 aaKnown RBP10.16□□□□□ -0.78
VRK3-223ENST00000601341 SPOCK1Q08629 439 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 BAMBIQ13145 260 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 GK2Q14410 553 aaPredicted RBP10.16□□□□□ -0.78
VRK3-223ENST00000601341 C4orf46Q504U0 113 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 TOR2AQ5JU69 321 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 ST6GALNAC3Q8NDV1 305 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 OR4D6Q8NGJ1 314 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 FGGYQ96C11 551 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 CNTD2Q9H8S5 307 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 PLEK2Q9NYT0 353 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 CGGBP1Q9UFW8 167 aaPredicted RBP10.16□□□□□ -0.78
VRK3-223ENST00000601341 TINAGQ9UJW2 476 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 MED12LQ86YW9 2145 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 ITPR1Q14643 2758 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 ATRXP46100 2492 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 A0A096LPE4 126 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 A0A1B0GTI1 187 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 A0A1W2PPZ6 126 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 RFPL4AA6NLU0 287 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 TMEM14DPA8MWL7 114 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 RFPL4AL1F8VTS6 287 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 P2RY10O00398 339 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 CGAP01215 116 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 AMY2AP04746 511 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 GSTP1P09211 210 aaKnown RBP10.16□□□□□ -0.78
VRK3-223ENST00000601341 ZNF32P17041 273 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 CASP6P55212 293 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 ARPC4P59998 168 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 ECH1Q13011 328 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 RAB35Q15286 201 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 DPPA2Q7Z7J5 298 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 C12orf45Q8N5I9 185 aaPredicted RBP10.16□□□□□ -0.78
VRK3-223ENST00000601341 NAXEQ8NCW5 288 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 OR52B4Q8NGK2 314 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 OR1K1Q8NGR3 316 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 SCARB1Q8WTV0 552 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 OR2H1Q9GZK4 316 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 POFUT1Q9H488 388 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 GHRLQ9UBU3 117 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 ANAPC10Q9UM13 185 aa10.16□□□□□ -0.78
VRK3-223ENST00000601341 CFDP00746 253 aaPredicted RBP10.15□□□□□ -0.78
VRK3-223ENST00000601341 APOC1P02654 83 aa10.15□□□□□ -0.78
VRK3-223ENST00000601341 MMP7P09237 267 aaPredicted RBP10.15□□□□□ -0.78
VRK3-223ENST00000601341 PATE4P0C8F1 98 aa10.15□□□□□ -0.78
VRK3-223ENST00000601341 IGHV1-2P23083 117 aa10.15□□□□□ -0.78
VRK3-223ENST00000601341 OPRM1P35372 400 aa10.15□□□□□ -0.78
VRK3-223ENST00000601341 UBE2MP61081 183 aaKnown RBP10.15□□□□□ -0.78
VRK3-223ENST00000601341 PSG4Q00888 419 aa10.15□□□□□ -0.78
VRK3-223ENST00000601341 ZNF345Q14585 488 aa10.15□□□□□ -0.78
VRK3-223ENST00000601341 HLXQ14774 488 aaPredicted RBP10.15□□□□□ -0.78
VRK3-223ENST00000601341 ACTBL2Q562R1 376 aa10.15□□□□□ -0.78
VRK3-223ENST00000601341 RNASE10Q5GAN6 216 aaKnown RBP10.15□□□□□ -0.78
VRK3-223ENST00000601341 LIN54Q6MZP7 749 aa10.15□□□□□ -0.78
VRK3-223ENST00000601341 Q6ZSR3 168 aa10.15□□□□□ -0.78
VRK3-223ENST00000601341 BEND4Q6ZU67 534 aa10.15□□□□□ -0.78
VRK3-223ENST00000601341 TMUB2Q71RG4 321 aa10.15□□□□□ -0.78
VRK3-223ENST00000601341 SLC25A42Q86VD7 318 aa10.15□□□□□ -0.78
VRK3-223ENST00000601341 CCDC36Q8IYA8 594 aa10.15□□□□□ -0.78
VRK3-223ENST00000601341 BPIFB2Q8N4F0 458 aa10.15□□□□□ -0.78
VRK3-223ENST00000601341 PAQR4Q8N4S7 273 aaPredicted RBP10.15□□□□□ -0.78
VRK3-223ENST00000601341 OR1J2Q8NGS2 313 aa10.15□□□□□ -0.78
VRK3-223ENST00000601341 KCNG3Q8TAE7 436 aa10.15□□□□□ -0.78
VRK3-223ENST00000601341 BCL2L2Q92843 193 aaPredicted RBP10.15□□□□□ -0.78
VRK3-223ENST00000601341 SPTSSAQ969W0 71 aa10.15□□□□□ -0.78
VRK3-223ENST00000601341 C10orf35Q96D05 121 aa10.15□□□□□ -0.78
VRK3-223ENST00000601341 KCNN3Q9UGI6 736 aa10.15□□□□□ -0.78
VRK3-223ENST00000601341 A0A0D9SG52 128 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 H3BSH0 61 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 GOSR2O14653 212 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 SLC25A4P12235 298 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 ZNF35P13682 527 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 ZNF20P17024 532 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 NAT1P18440 290 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 ARR3P36575 388 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 GNALP38405 381 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 ALDH3B1P43353 468 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 PRKXP51817 358 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 P2RY6Q15077 328 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 PNLIPRP3Q17RR3 467 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 ATPAF1Q5TC12 328 aaPredicted RBP10.14□□□□□ -0.79
VRK3-223ENST00000601341 ZNF774Q6NX45 483 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 C11orf88Q6PI97 169 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 RFPL4BQ6ZWI9 263 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 DOK3Q7L591 496 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 SLC51BQ86UW2 128 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 COMMD7Q86VX2 200 aa10.14□□□□□ -0.79
VRK3-223ENST00000601341 ZNF283Q8N7M2 679 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms