RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 POMT1Q9Y6A1 747 aa15.48■□□□□ 0.07
PNKP-213ENST00000599543 IGHV1-69DA0A0B4J2H0 117 aa15.47■□□□□ 0.07
PNKP-213ENST00000599543 TMEM269A0A1B0GVZ9 245 aa15.47■□□□□ 0.07
PNKP-213ENST00000599543 FCN3O75636 299 aa15.47■□□□□ 0.07
PNKP-213ENST00000599543 KNG1P01042 644 aa15.47■□□□□ 0.07
PNKP-213ENST00000599543 IGHV1-69P01742 117 aa15.47■□□□□ 0.07
PNKP-213ENST00000599543 DBTP11182 482 aaKnown RBP15.47■□□□□ 0.07
PNKP-213ENST00000599543 CAPGP40121 348 aa15.47■□□□□ 0.07
PNKP-213ENST00000599543 AQP4P55087 323 aa15.47■□□□□ 0.07
PNKP-213ENST00000599543 RAG2P55895 527 aa15.47■□□□□ 0.07
PNKP-213ENST00000599543 ROM1Q03395 351 aa15.47■□□□□ 0.07
PNKP-213ENST00000599543 TP53I3Q53FA7 332 aa15.47■□□□□ 0.07
PNKP-213ENST00000599543 WDR38Q5JTN6 314 aa15.47■□□□□ 0.07
PNKP-213ENST00000599543 SLC36A1Q7Z2H8 476 aa15.47■□□□□ 0.07
PNKP-213ENST00000599543 YIPF7Q8N8F6 280 aa15.47■□□□□ 0.07
PNKP-213ENST00000599543 C12orf43Q96C57 262 aaKnown RBP15.47■□□□□ 0.07
PNKP-213ENST00000599543 CCL13Q99616 98 aa15.47■□□□□ 0.07
PNKP-213ENST00000599543 MICU1Q9BPX6 476 aa15.47■□□□□ 0.07
PNKP-213ENST00000599543 BEX1Q9HBH7 125 aa15.47■□□□□ 0.07
PNKP-213ENST00000599543 C8orf4Q9NR00 106 aa15.47■□□□□ 0.07
PNKP-213ENST00000599543 RPUSD1Q9UJJ7 312 aaKnown RBP15.47■□□□□ 0.07
PNKP-213ENST00000599543 RHBDD3Q9Y3P4 386 aa15.47■□□□□ 0.07
PNKP-213ENST00000599543 H3BSH0 61 aa15.46■□□□□ 0.07
PNKP-213ENST00000599543 CDIPTO14735 213 aa15.46■□□□□ 0.07
PNKP-213ENST00000599543 OR2T7P0C7T2 308 aa15.46■□□□□ 0.07
PNKP-213ENST00000599543 CDONQ4KMG0 1287 aa15.46■□□□□ 0.07
PNKP-213ENST00000599543 TTC23Q5W5X9 447 aa15.46■□□□□ 0.07
PNKP-213ENST00000599543 TREML4Q6UXN2 200 aa15.46■□□□□ 0.07
PNKP-213ENST00000599543 C17orf107Q6ZR85 190 aa15.46■□□□□ 0.07
PNKP-213ENST00000599543 OR2T27Q8NH04 317 aa15.46■□□□□ 0.07
PNKP-213ENST00000599543 TBC1D15Q8TC07 691 aa15.46■□□□□ 0.07
PNKP-213ENST00000599543 ITPKCQ96DU7 683 aa15.46■□□□□ 0.07
PNKP-213ENST00000599543 RTL8AQ9BWD3 113 aa15.46■□□□□ 0.07
PNKP-213ENST00000599543 CNTD2Q9H8S5 307 aa15.46■□□□□ 0.07
PNKP-213ENST00000599543 ONECUT1Q9UBC0 465 aa15.46■□□□□ 0.07
PNKP-213ENST00000599543 MYRFQ9Y2G1 1151 aa15.46■□□□□ 0.07
PNKP-213ENST00000599543 KPTNQ9Y664 436 aa15.46■□□□□ 0.07
PNKP-213ENST00000599543 A0A1B0GVI7 797 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 A0A1B0GW55 424 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 DAPL1A0PJW8 107 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 MPZL2O60487 215 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 SRSF10O75494 262 aaKnown RBP15.45■□□□□ 0.06
PNKP-213ENST00000599543 ATP6V1G2O95670 118 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 DUX4L2P0CJ85 424 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 DUX4L3P0CJ86 424 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 DUX4L4P0CJ87 422 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 DUX4L5P0CJ88 424 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 DUX4L6P0CJ89 424 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 DUX4L7P0CJ90 424 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 IKZF1Q13422 519 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 TMED1Q13445 227 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 ODF4Q2M2E3 257 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 DUX4L9Q6RFH8 374 aaPredicted RBP15.45■□□□□ 0.06
PNKP-213ENST00000599543 VMO1Q7Z5L0 202 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 COMMD2Q86X83 199 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 PDZD9Q8IXQ8 264 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 FGFRL1Q8N441 504 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 FAM216BQ8N7L0 139 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 MNTQ99583 582 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 PBOV1Q9GZY1 135 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 TLNRD1Q9H1K6 362 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 VCXQ9H320 206 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 NIPAL2Q9H841 368 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 ABCB9Q9NP78 766 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 C1RLQ9NZP8 487 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 DNAJB11Q9UBS4 358 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 DUX4Q9UBX2 424 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 GNG8Q9UK08 70 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 SLC22A13Q9Y226 551 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 MPC1Q9Y5U8 109 aa15.45■□□□□ 0.06
PNKP-213ENST00000599543 WNK1Q9H4A3 2382 aa15.44■□□□□ 0.06
PNKP-213ENST00000599543 METTL15A6NJ78 407 aa15.44■□□□□ 0.06
PNKP-213ENST00000599543 LOC110117498-PIK3R3F6TDL0 507 aa15.44■□□□□ 0.06
PNKP-213ENST00000599543 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.44■□□□□ 0.06
PNKP-213ENST00000599543 J3QRE1 110 aa15.44■□□□□ 0.06
PNKP-213ENST00000599543 NDUFB3O43676 98 aa15.44■□□□□ 0.06
PNKP-213ENST00000599543 ZNF254O75437 659 aa15.44■□□□□ 0.06
PNKP-213ENST00000599543 NDUFA7O95182 113 aa15.44■□□□□ 0.06
PNKP-213ENST00000599543 KRT8P05787 483 aa15.44■□□□□ 0.06
PNKP-213ENST00000599543 GMFBP60983 142 aa15.44■□□□□ 0.06
PNKP-213ENST00000599543 EGR3Q06889 387 aa15.44■□□□□ 0.06
PNKP-213ENST00000599543 PRDX4Q13162 271 aa15.44■□□□□ 0.06
PNKP-213ENST00000599543 ZNF829Q3KNS6 432 aaPredicted RBP15.44■□□□□ 0.06
PNKP-213ENST00000599543 LRRC10Q5BKY1 277 aa15.44■□□□□ 0.06
PNKP-213ENST00000599543 ZNF684Q5T5D7 378 aa15.44■□□□□ 0.06
PNKP-213ENST00000599543 DEGS2Q6QHC5 323 aa15.44■□□□□ 0.06
PNKP-213ENST00000599543 KCTD8Q6ZWB6 473 aa15.44■□□□□ 0.06
PNKP-213ENST00000599543 LHFPL3Q86UP9 236 aa15.44■□□□□ 0.06
PNKP-213ENST00000599543 CMTM4Q8IZR5 234 aa15.44■□□□□ 0.06
PNKP-213ENST00000599543 KIR3DL3Q8N743 410 aa15.44■□□□□ 0.06
PNKP-213ENST00000599543 OR52I1Q8NGK6 324 aa15.44■□□□□ 0.06
PNKP-213ENST00000599543 OR51E1Q8TCB6 317 aa15.44■□□□□ 0.06
PNKP-213ENST00000599543 WFDC12Q8WWY7 111 aa15.44■□□□□ 0.06
PNKP-213ENST00000599543 DYRK2Q92630 601 aa15.44■□□□□ 0.06
PNKP-213ENST00000599543 SEH1LQ96EE3 360 aa15.44■□□□□ 0.06
PNKP-213ENST00000599543 Q96MT0 163 aa15.44■□□□□ 0.06
PNKP-213ENST00000599543 EXOGQ9Y2C4 368 aaKnown RBP15.44■□□□□ 0.06
PNKP-213ENST00000599543 R4GMQ9 66 aa15.44■□□□□ 0.06
PNKP-213ENST00000599543 A0A0U1RQK1 487 aa15.43■□□□□ 0.06
PNKP-213ENST00000599543 NKX6-3A6NJ46 265 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms