RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 SCCPDHQ8NBX0 429 aa12.09□□□□□ -0.47
VRK3-213ENST00000597215 TSPAN14Q8NG11 270 aa12.09□□□□□ -0.47
VRK3-213ENST00000597215 OR14A2Q96R54 314 aa12.09□□□□□ -0.47
VRK3-213ENST00000597215 NR1H4Q96RI1 486 aaPredicted RBP12.09□□□□□ -0.47
VRK3-213ENST00000597215 TMED9Q9BVK6 235 aa12.09□□□□□ -0.47
VRK3-213ENST00000597215 WIPI2Q9Y4P8 454 aa12.09□□□□□ -0.47
VRK3-213ENST00000597215 ITPR3Q14573 2671 aa12.09□□□□□ -0.47
VRK3-213ENST00000597215 A0A087WXM4 84 aa12.08□□□□□ -0.48
VRK3-213ENST00000597215 IGKV1-9A0A0C4DH69 117 aa12.08□□□□□ -0.48
VRK3-213ENST00000597215 J3QT63 122 aa12.08□□□□□ -0.48
VRK3-213ENST00000597215 IGHV2-70P01814 119 aa12.08□□□□□ -0.48
VRK3-213ENST00000597215 RAB3AP20336 220 aa12.08□□□□□ -0.48
VRK3-213ENST00000597215 USF1P22415 310 aaPredicted RBP12.08□□□□□ -0.48
VRK3-213ENST00000597215 PSMA1P25786 263 aaKnown RBP12.08□□□□□ -0.48
VRK3-213ENST00000597215 PSMB9P28065 219 aa12.08□□□□□ -0.48
VRK3-213ENST00000597215 HAAOP46952 286 aa12.08□□□□□ -0.48
VRK3-213ENST00000597215 RBP2P50120 134 aa12.08□□□□□ -0.48
VRK3-213ENST00000597215 ATP1B3P54709 279 aa12.08□□□□□ -0.48
VRK3-213ENST00000597215 BTG1P62324 171 aa12.08□□□□□ -0.48
VRK3-213ENST00000597215 PPP3R1P63098 170 aa12.08□□□□□ -0.48
VRK3-213ENST00000597215 AVPI1Q5T686 147 aa12.08□□□□□ -0.48
VRK3-213ENST00000597215 HAGHLQ6PII5 290 aaPredicted RBP12.08□□□□□ -0.48
VRK3-213ENST00000597215 WDR82Q6UXN9 313 aa12.08□□□□□ -0.48
VRK3-213ENST00000597215 OR10Z1Q8NGY1 313 aa12.08□□□□□ -0.48
VRK3-213ENST00000597215 LRRC29Q8WV35 223 aa12.08□□□□□ -0.48
VRK3-213ENST00000597215 DERL3Q96Q80 235 aa12.08□□□□□ -0.48
VRK3-213ENST00000597215 VCX3AQ9NNX9 186 aa12.08□□□□□ -0.48
VRK3-213ENST00000597215 TAS2R4Q9NYW5 299 aa12.08□□□□□ -0.48
VRK3-213ENST00000597215 CKLFQ9UBR5 152 aa12.08□□□□□ -0.48
VRK3-213ENST00000597215 POLDIP2Q9Y2S7 368 aa12.08□□□□□ -0.48
VRK3-213ENST00000597215 PPIAL4EA0A075B759 164 aa12.07□□□□□ -0.48
VRK3-213ENST00000597215 A0A096LNT2 108 aa12.07□□□□□ -0.48
VRK3-213ENST00000597215 TRBV5-7A0A0A0MS05 114 aa12.07□□□□□ -0.48
VRK3-213ENST00000597215 IGHV4-61A0A0C4DH41 118 aa12.07□□□□□ -0.48
VRK3-213ENST00000597215 ISPDA4D126 451 aa12.07□□□□□ -0.48
VRK3-213ENST00000597215 PPIAL4DF5H284 164 aa12.07□□□□□ -0.48
VRK3-213ENST00000597215 FSTL3O95633 263 aa12.07□□□□□ -0.48
VRK3-213ENST00000597215 HCKP08631 526 aa12.07□□□□□ -0.48
VRK3-213ENST00000597215 PPIAL4FP0DN26 164 aa12.07□□□□□ -0.48
VRK3-213ENST00000597215 FSTP19883 344 aa12.07□□□□□ -0.48
VRK3-213ENST00000597215 GABRA5P31644 462 aa12.07□□□□□ -0.48
VRK3-213ENST00000597215 RBMXP38159 391 aaKnown RBP12.07□□□□□ -0.48
VRK3-213ENST00000597215 RPS25P62851 125 aaKnown RBP12.07□□□□□ -0.48
VRK3-213ENST00000597215 LOXL1Q08397 574 aaPredicted RBP12.07□□□□□ -0.48
VRK3-213ENST00000597215 ACSM3Q53FZ2 586 aa12.07□□□□□ -0.48
VRK3-213ENST00000597215 ZNF529Q6P280 563 aa12.07□□□□□ -0.48
VRK3-213ENST00000597215 BOLLQ8N9W6 283 aaKnown RBP12.07□□□□□ -0.48
VRK3-213ENST00000597215 ZNF671Q8TAW3 534 aa12.07□□□□□ -0.48
VRK3-213ENST00000597215 AQP3Q92482 292 aa12.07□□□□□ -0.48
VRK3-213ENST00000597215 PKIBQ9C010 78 aa12.07□□□□□ -0.48
VRK3-213ENST00000597215 PPIAL4AQ9Y536 164 aa12.07□□□□□ -0.48
VRK3-213ENST00000597215 CELSR1Q9NYQ6 3014 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 IGKV1-27A0A075B6S5 117 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 SRRM5B3KS81 715 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 CCRL2O00421 344 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 MAGEB3O15480 346 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 GPX5O75715 221 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 LHBP01229 141 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 MPZP25189 248 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 MDH2P40926 338 aaKnown RBP12.06□□□□□ -0.48
VRK3-213ENST00000597215 MTCP1P56278 107 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 ZMYND11Q15326 602 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 NEDD8Q15843 81 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 SSX1Q16384 188 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 TMEM155Q4W5P6 130 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 FAM201AQ5SY85 155 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 ASPHD2Q6ICH7 369 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 UNQ9370/PRO34162Q6UXP9 181 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 LRRC28Q86X40 367 aaPredicted RBP12.06□□□□□ -0.48
VRK3-213ENST00000597215 ANGPTL5Q86XS5 388 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 MUC20Q8N307 709 aaPredicted RBP12.06□□□□□ -0.48
VRK3-213ENST00000597215 CIARTQ8N365 385 aaPredicted RBP12.06□□□□□ -0.48
VRK3-213ENST00000597215 SPICQ8N5J4 248 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 GCSAMQ8N6F7 178 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 TMEM203Q969S6 136 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 CPNE2Q96FN4 548 aaPredicted RBP12.06□□□□□ -0.48
VRK3-213ENST00000597215 COX4I2Q96KJ9 171 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 GAL3ST1Q99999 423 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 NARFLQ9H6Q4 476 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 METTL17Q9H7H0 456 aaPredicted RBP12.06□□□□□ -0.48
VRK3-213ENST00000597215 NOX4Q9NPH5 578 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 TMEM138Q9NPI0 162 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 NDUFB11Q9NX14 153 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 FOXJ3Q9UPW0 622 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 SF3B6Q9Y3B4 125 aaKnown RBP12.06□□□□□ -0.48
VRK3-213ENST00000597215 CR1P17927 2039 aa12.06□□□□□ -0.48
VRK3-213ENST00000597215 TRAV38-1A0A0B4J264 116 aa12.05□□□□□ -0.48
VRK3-213ENST00000597215 A0A1W2PPK0 400 aa12.05□□□□□ -0.48
VRK3-213ENST00000597215 LGALS8O00214 317 aa12.05□□□□□ -0.48
VRK3-213ENST00000597215 SMAD7O15105 426 aaKnown RBP12.05□□□□□ -0.48
VRK3-213ENST00000597215 RHBDL1O75783 438 aa12.05□□□□□ -0.48
VRK3-213ENST00000597215 SC5DO75845 299 aa12.05□□□□□ -0.48
VRK3-213ENST00000597215 RGS9O75916 674 aaPredicted RBP12.05□□□□□ -0.48
VRK3-213ENST00000597215 INMTO95050 263 aa12.05□□□□□ -0.48
VRK3-213ENST00000597215 ZNF205O95201 554 aa12.05□□□□□ -0.48
VRK3-213ENST00000597215 ALDOBP05062 364 aa12.05□□□□□ -0.48
VRK3-213ENST00000597215 HEXAP06865 529 aa12.05□□□□□ -0.48
VRK3-213ENST00000597215 IGFBP3P17936 291 aaPredicted RBP12.05□□□□□ -0.48
VRK3-213ENST00000597215 EGR1P18146 543 aa12.05□□□□□ -0.48
VRK3-213ENST00000597215 BDKRB2P30411 391 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms