RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 DNAJB11Q9UBS4 358 aa14.44□□□□□ -0.1
SHKBP1-212ENST00000596163 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.43□□□□□ -0.1
SHKBP1-212ENST00000596163 TMEM212A6NML5 194 aa14.43□□□□□ -0.1
SHKBP1-212ENST00000596163 GNAO1P09471 354 aa14.43□□□□□ -0.1
SHKBP1-212ENST00000596163 LIMS3P0CW19 117 aa14.43□□□□□ -0.1
SHKBP1-212ENST00000596163 LIMS4P0CW20 117 aa14.43□□□□□ -0.1
SHKBP1-212ENST00000596163 ZNF20P17024 532 aa14.43□□□□□ -0.1
SHKBP1-212ENST00000596163 FUT6P51993 359 aa14.43□□□□□ -0.1
SHKBP1-212ENST00000596163 RIPK1Q13546 671 aa14.43□□□□□ -0.1
SHKBP1-212ENST00000596163 CNN3Q15417 329 aaKnown RBP14.43□□□□□ -0.1
SHKBP1-212ENST00000596163 KRTAP21-3Q3LHN1 58 aa14.43□□□□□ -0.1
SHKBP1-212ENST00000596163 CCDC58Q4VC31 144 aa14.43□□□□□ -0.1
SHKBP1-212ENST00000596163 CD276Q5ZPR3 534 aa14.43□□□□□ -0.1
SHKBP1-212ENST00000596163 LYPD2Q6UXB3 125 aa14.43□□□□□ -0.1
SHKBP1-212ENST00000596163 BTNL3Q6UXE8 466 aa14.43□□□□□ -0.1
SHKBP1-212ENST00000596163 SLC36A1Q7Z2H8 476 aa14.43□□□□□ -0.1
SHKBP1-212ENST00000596163 FBLIM1Q8WUP2 373 aa14.43□□□□□ -0.1
SHKBP1-212ENST00000596163 GGHQ92820 318 aa14.43□□□□□ -0.1
SHKBP1-212ENST00000596163 CHST5Q9GZS9 411 aa14.43□□□□□ -0.1
SHKBP1-212ENST00000596163 FGF23Q9GZV9 251 aaPredicted RBP14.43□□□□□ -0.1
SHKBP1-212ENST00000596163 C7orf69Q9H7B7 122 aa14.43□□□□□ -0.1
SHKBP1-212ENST00000596163 NEK6Q9HC98 313 aa14.43□□□□□ -0.1
SHKBP1-212ENST00000596163 RASL12Q9NYN1 266 aa14.43□□□□□ -0.1
SHKBP1-212ENST00000596163 POLDIP2Q9Y2S7 368 aa14.43□□□□□ -0.1
SHKBP1-212ENST00000596163 SONP18583 2426 aaKnown RBP14.43□□□□□ -0.1
SHKBP1-212ENST00000596163 PQLC2LA1A4F0 135 aa14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 A6NIN4 97 aa14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 OR4C45A6NMZ5 311 aa14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 H3BSH0 61 aa14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 TNFRSF13BO14836 293 aaPredicted RBP14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 PHF1O43189 567 aaPredicted RBP14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 GYPAP02724 150 aa14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 EGR1P18146 543 aa14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 GLRA1P23415 457 aa14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 HAAOP46952 286 aa14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 HSPA13P48723 471 aa14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 ETV1P50549 477 aa14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 AQP4P55087 323 aa14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 SEC61A1P61619 476 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 ST3GAL4Q11206 333 aa14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 C11orf91Q3C1V1 193 aa14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 WDR25Q64LD2 544 aaPredicted RBP14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 RPL22L1Q6P5R6 122 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 HAGHLQ6PII5 290 aaPredicted RBP14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 IL17RELQ6ZVW7 336 aa14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 FAM90A1Q86YD7 464 aa14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 BPIFB6Q8NFQ5 453 aa14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 OR5AK2Q8NH90 309 aa14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 AQP3Q92482 292 aa14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 TMIGD2Q96BF3 282 aa14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 DNTTIP1Q9H147 329 aa14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 KAAG1Q9UBP8 84 aa14.42□□□□□ -0.1
SHKBP1-212ENST00000596163 IGHV3OR15-7A0A075B7D8 119 aa14.41□□□□□ -0.1
SHKBP1-212ENST00000596163 TRBV2A0A0J9YWF9 115 aa14.41□□□□□ -0.1
SHKBP1-212ENST00000596163 FAM230AA0A1W2PPH8 454 aa14.41□□□□□ -0.1
SHKBP1-212ENST00000596163 KIAA1324LA8MWY0 1029 aaPredicted RBP14.41□□□□□ -0.1
SHKBP1-212ENST00000596163 J3QT63 122 aa14.41□□□□□ -0.1
SHKBP1-212ENST00000596163 AKR7A2O43488 359 aa14.41□□□□□ -0.1
SHKBP1-212ENST00000596163 OCM2P0CE71 109 aa14.41□□□□□ -0.1
SHKBP1-212ENST00000596163 OCMP0CE72 109 aaPredicted RBP14.41□□□□□ -0.1
SHKBP1-212ENST00000596163 PRKACBP22694 351 aa14.41□□□□□ -0.1
SHKBP1-212ENST00000596163 DMRTC1Q5HYR2 192 aa14.41□□□□□ -0.1
SHKBP1-212ENST00000596163 UTS2BQ765I0 119 aa14.41□□□□□ -0.1
SHKBP1-212ENST00000596163 STX19Q8N4C7 294 aa14.41□□□□□ -0.1
SHKBP1-212ENST00000596163 OR13C3Q8NGS6 347 aa14.41□□□□□ -0.1
SHKBP1-212ENST00000596163 RAB40AQ8WXH6 277 aa14.41□□□□□ -0.1
SHKBP1-212ENST00000596163 FGGYQ96C11 551 aa14.41□□□□□ -0.1
SHKBP1-212ENST00000596163 BORCS8Q96FH0 119 aa14.41□□□□□ -0.1
SHKBP1-212ENST00000596163 MRI1Q9BV20 369 aa14.41□□□□□ -0.1
SHKBP1-212ENST00000596163 TMPRSS13Q9BYE2 586 aa14.41□□□□□ -0.1
SHKBP1-212ENST00000596163 BABAM2Q9NXR7 383 aa14.41□□□□□ -0.1
SHKBP1-212ENST00000596163 SCN3BQ9NY72 215 aa14.41□□□□□ -0.1
SHKBP1-212ENST00000596163 PSORS1C1Q9UIG5 152 aa14.41□□□□□ -0.1
SHKBP1-212ENST00000596163 INSIG2Q9Y5U4 225 aa14.41□□□□□ -0.1
SHKBP1-212ENST00000596163 MALRD1Q5VYJ5 2156 aa14.41□□□□□ -0.1
SHKBP1-212ENST00000596163 LOC105371242A0A075B767 164 aa14.4□□□□□ -0.1
SHKBP1-212ENST00000596163 NKX6-3A6NJ46 265 aa14.4□□□□□ -0.1
SHKBP1-212ENST00000596163 TRAPPC2LH3BP13 241 aa14.4□□□□□ -0.1
SHKBP1-212ENST00000596163 TMPRSS2O15393 492 aa14.4□□□□□ -0.1
SHKBP1-212ENST00000596163 ECDO95905 644 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-212ENST00000596163 ATP1B3P54709 279 aa14.4□□□□□ -0.1
SHKBP1-212ENST00000596163 GMFBP60983 142 aa14.4□□□□□ -0.1
SHKBP1-212ENST00000596163 HOXA4Q00056 320 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-212ENST00000596163 UBE2V2Q15819 145 aa14.4□□□□□ -0.1
SHKBP1-212ENST00000596163 ATPAF1Q5TC12 328 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-212ENST00000596163 ZNF841Q6ZN19 808 aa14.4□□□□□ -0.1
SHKBP1-212ENST00000596163 DNAAF1Q8NEP3 725 aa14.4□□□□□ -0.1
SHKBP1-212ENST00000596163 OR52N1Q8NH53 320 aa14.4□□□□□ -0.1
SHKBP1-212ENST00000596163 NANPQ8TBE9 248 aa14.4□□□□□ -0.1
SHKBP1-212ENST00000596163 MED30Q96HR3 178 aa14.4□□□□□ -0.1
SHKBP1-212ENST00000596163 PKIBQ9C010 78 aa14.4□□□□□ -0.1
SHKBP1-212ENST00000596163 MMP26Q9NRE1 261 aa14.4□□□□□ -0.1
SHKBP1-212ENST00000596163 NLKQ9UBE8 527 aa14.4□□□□□ -0.1
SHKBP1-212ENST00000596163 METRNQ9UJH8 293 aa14.4□□□□□ -0.1
SHKBP1-212ENST00000596163 AUP1Q9Y679 476 aa14.4□□□□□ -0.1
SHKBP1-212ENST00000596163 IGHV2-70DA0A0C4DH43 119 aa14.39□□□□□ -0.11
SHKBP1-212ENST00000596163 KIR2DS1A0A191URI9 304 aa14.39□□□□□ -0.11
SHKBP1-212ENST00000596163 E9PI62 339 aa14.39□□□□□ -0.11
SHKBP1-212ENST00000596163 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.39□□□□□ -0.11
SHKBP1-212ENST00000596163 GPR37O15354 613 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms